Fabrication of a Dipole-assisted Solid Phase Extraction Microchip for Trace Metal Analysis in Water Samples

This paper describes a fabrication protocol for a dipole-assisted solid phase extraction (SPE) microchip available for trace metal analysis in water samples. A brief overview of the evolution of chip-based SPE techniques is provided. This is followed by an introduction to specific polymeric materials and their role in SPE. To develop an innovative dipole-assisted SPE technique, a chlorine (Cl)-containing SPE functionality was implanted into a poly(methyl methacrylate) (PMMA) microchip. Herein, diverse analytical techniques including contact angle analysis, Raman spectroscopic analysis, and laser ablation-inductively coupled plasma-mass spectrometry (LA-ICP-MS) analysis were employed to validate the utility of the implantation protocol of the C-Cl moieties on the PMMA. The analytical results of the X-ray absorption near-edge structure (XANES) analysis also demonstrated the feasibility of the Cl-containing PMMA used as an extraction medium by virtue of the dipole-ion interactions between the highly electronegative C-Cl moieties and the positively charged metal ions.     

champuru 1.0: a computer software for unraveling mixtures of two DNA sequences of unequal lengths

champuru is an interactive, user‐friendly web software that facilitates the deconvolution of mixed chromatograms obtained when sequencing directly mixtures of two DNA templates of unequal lengths. The program takes as input two strings of characters describing the forward and reverse chromatograms as obtained by direct sequencing and returns, most often after several iterations aimed at correcting basecalling errors, the sequences of the two templates present in the mixture. champuru was written in perl , with a web interface accessible online at http://134.157.186.185/champuru/champuru.htm .     

Frustrative reward omission increases aggressive behaviour of inferior fighters

Animals use aggressive behaviour to gain access to resources, and individuals adjust their behaviour relative to resource value and own resource holding potential (RHP). Normally, smaller individuals have inferior fighting abilities compared with larger conspecifics. Affective and cognitive processes can alter contest dynamics, but the interaction between such effects and that of differing RHPs has not been adjudged. We investigated effects of omission of expected reward (OER) on competing individuals with contrasting RHPs. Small and large rainbow trout (Oncorhynchus mykiss) were conditioned to associate a light with reward. Thereafter, the reward was omitted for half of the fish prior to a contest between individuals possessing a 36–40% difference in RHP. Small control individuals displayed submissive behaviour and virtually no aggression. By contrast, small OER individuals were more aggressive, and two out of 11 became socially dominant. Increased aggression in small OER individuals was accompanied by increased serotonin levels in the dorsomedial pallium (proposed amygdala homologue), but no changes in limbic dopamine neurochemistry were observed in OER-exposed individuals. The behavioural and physiological response to OER in fish indicates that frustration is an evolutionarily conserved affective state. Moreover, our results indicate that aggressive motivation to reward unpredictability affects low RHP individuals strongest.     

COMBO: a defined freshwater culture medium for algae and zooplankton

In order to conduct experiments on interactions between animals and food organisms, it is necessary to develop a medium that adequately supports the growth of both algae and zooplankton without the need to alter the medium to accommodate either the algae or the animals. We devised a freshwater medium, named COMBO, that supports excellent growth of both algae and zooplankton. Two types of algae, Ankistrodesmus falcatus and Stephanodiscus hantzschii, were reared in COMBO and their growth rates were not significantly different from those of algae grown in a reference medium (WC). One of these algae, A. falcatus, was then fed to a cladoceran, Daphnia pulicaria, which was also cultured in COMBO, and the resulting fecundities of D. pulicaria were compared to those of animals reared in natural surface water. We also determined whether the value of COMBO as a medium for D. pulicaria was affected by modifications in nitrogen or phosphorus concentration to evaluate whether the new medium will be useful in nutritional research. Lowering the N or P content of COMBO did not affect the reproductive performance of D. pulicaria. Other researchers have also reported excellent growth and reproduction by numerous algae and zooplankton reared in COMBO. Our results suggest that COMBO is an effective artificial, defined culture medium capable of supporting robust growth and reproduction of both freshwater algae and zooplankton. This revised version was published online in July 2006 with corrections to the Cover Date.     

Bulk and trace element analysis of spices: the applicability of k0-standardization and energy dispersive X-ray fluorescence

Methodology has been developed for the bulk and trace element analysis of spices such as curry powder and turmeric powder originated from Sri Lanka by the k₀-standardization method (INAA-k₀) and by energy dispersive X-ray fluorescence (EDXRF). SRM 1572 citrus leaves was used to check the accuracy of the results obtained by the two nuclear techniques. The elements determined quantitatively in these matrices by the EDXRF analysis were bromine, calcium, copper, iron, potassium, magnesium, manganese, phosphorus, rubidium, sulphur, strontium and zinc. The results obtained by the two techniques are comparable, although a few inconsistencies were detected, requiring adequate attention for their correction, whenever possible, in future studies.     

Serum concentrations of macro and trace elements in heroin addicts of the Canary islands

Na, K, Ca, Mg, P, Fe, Cu, Zn and Se concentrations were determined in the serum of 106 heroin addicts and were compared with the concentrations obtained in a control group formed of 186 apparently healthy individuals. Heroin addicts displayed K and Se mean concentrations lower (p < 0.05), and Na, Mg, P mean concentrations and a Cu/Zn ratio higher (p < 0.05) than those mean values observed in the control group. The Mg and P concentrations in the serum of heroin addicts tended to normalize when age increased. The heroin addicts included in the methadone maintenance treatment program had higher serum mean concentrations of K and Mg than the heroin addicts in the detoxification process. The Na, K and Mg concentrations displayed highly significant correlations, with a different behavior for the heroin addicts group and the control group. When applying factor analysis and representing the scores of the first and second factors, the heroin addicts tended to differentiation from the control group. However, methadone substitution treatment was not able to normalize these concentrations.     

Intrastratal trace fossil zonation,Cretaceous flysch of northern California

Dissection of fine‐grained turbidites within the Franciscan complex at Trinidad Harbor reveals intrastratal zonation of biogenic structures. The pre‐depositional association comprises only three ichnotaxa (preserved in convex hyporelief) and is less diverse than the tiered post‐depositional association (comprised by at least seven ichnotaxa preserved in full relief). The latter association is dominated by Melatercichnus (n. ichnogen.). Post‐depositional trace‐makers exploited abundant plant detritus deposited with the turbidite sand. Temporal alternation of trace fossil associations resulted from the infrequent, but catastrophic, disturbance of pre‐turbidite communities and local replacement by assemblies of opportunistic organisms. Although probably short‐lived at specific sites, the post‐turbidite infauna was tiered, enabling a variety of deposit feeders to harvest phytodetritus of varied size or density simultaneously at different depths within newly deposited turbidite sand layers.     

Vagorichnus,a new ichnogenus for feeding burrow systems and its occurrence as discrete and compound ichnotaxa in Jurassic lacustrine turbidites of Central China

A new ichnogenus, Vagorichnus, is figured and described from Jurassic lacustrine turbidites of the Anyao Formation, Henan Province, Central China. Vagorichnus consists of complex burrow systems composed of discontinuous curved to meandering segments in which irregular networks are formed. The ichnospecies V. anyao covers burrow systems characterized by constricted and irregularly annulated segments, and ridge‐like knobs. Although traces are preserved as hypichnial ridges on the sole of turbidite sandstones, several lines of evidence indicate that these ichnofossils record the activity of a post‐event infauna. Vagorichnus occurs as discrete and compound ichnotaxa. In the latter case, it grades into Gordia and Tuberculichnus. Vagorichnus is interpreted as invertebrate feeding structures (Fodinichnia).     

Anaerobic digestion of chicken manure: Influence of trace element supplementation

In this study, anaerobic digestion of nitrogen‐rich chicken (egg‐laying hen) manure at different trace element (TE) mix doses and different total ammonia nitrogen (TAN) concentrations was investigated in batch digestion experiments. With respect to nonsupplemented TE sets, addition of TE mixture containing 1 mg/L Ni, 1 mg/L Co, 0.2 mg/L Mo, 0.2 mg/L Se, 0.2 mg/L W, and 5 mg/L Fe at TAN concentrations of 3000 mg/L and 4000 mg/L, cumulative CH₄ production and CH₄ production rate improved by 7–8% and 5–6%, respectively. The results revealed that at a very high TAN concentration of 6000 mg/L, the effect of TE addition was significantly high and the cumulative CH₄ production and production rate were increased by 20 and 39.5%, respectively. Therefore, it is concluded that at elevated TAN concentrations the CH₄ production that was stimulated by TE supplementation was presumably occurred through syntrophic acetate oxidation.