Effect of diet composition and lysine supply on growth and body composition in juvenile turbot (Psetta maxima)

A 10-week feeding trial was conducted to study the effect of feeding level and dietary lysine concentration on growth, protein and lysine retention, and body composition in juvenile turbot. Maintenance requirement for lysine and the efficiency of lysine utilisation were determined as well. Two experimental diets were formulated based on fishmeal or wheat gluten as main protein sources, containing 6.4 g (Diet A, control) and 4.5 g lysine per 100 g CP (Diet B), respectively. Diets were fed once daily at six feeding levels (per day 0.3%, 0.6%, 0.9%, 1.2%, and 1.5% of body weight [BW] and ad libitum) to a total of 432 fish of 48 g initial BW. No differences in the growth parameters were observed between diets at the same feeding level, except a lower feed to gain ratio (p < 0.05) at the highest feeding level at Diet B. Whole-body composition was not affected by diet, whereas muscle protein concentration was significantly lower for fish fed Diet B. Amino acid concentration in whole-body protein was affected by dietary treatment and fish fed Diet B showed lower concentrations of all essential amino acids. In fish muscle protein, lysine, methionine, leucine, isoleucine, and valine concentrations were significantly lower in Diet B. Efficiency of lysine utilisation for growth (k_lys) was determined by linear regression analysis and amounted for 0.69 for Diet B. The maintenance lysine requirement defined at zero lysine retention was 6.5 mg · kg^?0.8 · d^?1. Lysine intakes at zero protein retention were 13.0 mg and 12.9 mg · kg^?0.8 · d^?1 for Diet A and B, respectively. Growth and nutrient retention were similar for both diets and, therefore, a lysine deficiency in Diet B did not occur. In conclusion, a proportion of 330 g wheat gluten per kg feed did not influence growth performance and maintenance requirement for lysine in juvenile turbot. However, the effect of diet composition on the amino acid profile of body protein might be relevant for the derivation of the amino acid requirement from protein retention.     

Irrigation planning to transform subsistence agriculture: Lessons From El Salvador

Experience with irrigation schemes designed to improve the productivity of subsistence farmers in Latin America seems to parallel the results of the green revolution in Southeast Asia. Although in some cases the impact on the productivity has been significant, in far too many cases the pervasive pattern of inequity has been reinforced. This case study of the Irrigation District of Zapotitan in El Salvador analyses some of the reasons for the unexpected results, with particular reference to the planning process. It essentially illustrates that the transformation of subsistence agriculture through irrigation demands new institutions designed not only to service agricultural production but also to ensure the accrual of benefits on the targeted group.     

Ecogeographical differentiation patterns inAdonis sect.Consiligo (Ranunculaceae)

Adonis sect.Consiligo is split into three subsections based on morphology, growth pattern, pollen and fruit morphology. For all species distribution maps are provided and discussed with regard to their ecology and climatic requirements. These data reveal additional characters that support the classification of the taxa. Most species of the section grow in continental Eurasiatic steppes and mountain steppe habitats. Only the species of subsect.Amurenses grow in Far Eastern temperate forests and prefer a more oceanic climate. The taxonomic position of these strongly divergent species is supported by the distributional and ecological data. The evolution ofAdonis sect.Consiligo occurred under strong climatic control. During evolution the taxa could only slightly widen their ecological amplitude and, thus, ecology remained rather stable except that of the subsect.Amurenses. Ecological and distributional data can be used to validate taxonomy and phylogeny and reveal additional informations.     

Supplementing Seed Banks to Rehabilitate Disturbed Mojave Desert Shrublands: Where Do All the Seeds Go?

Revegetation of degraded arid lands often involves supplementing impoverished seed banks and improving the seedbed, yet these approaches frequently fail. To understand these failures, we tracked the fates of seeds for six shrub species that were broadcast across two contrasting surface disturbances common to the Mojave Desert—sites compacted by concentrated vehicle use and trenched sites where topsoil and subsurface soils were mixed. We evaluated seedbed treatments that enhance soil‐seed contact (tackifier) and create surface roughness while reducing soil bulk density (harrowing). We also explored whether seed harvesting by granivores and seedling suppression by non‐native annuals influence the success of broadcast seeding in revegetating degraded shrublands. Ten weeks after treatments, seeds readily moved off of experimental plots in untreated compacted sites, but seed movements were reduced 32% by tackifier and 55% through harrowing. Harrowing promoted seedling emergence in compacted sites, particularly for the early‐colonizing species Encelia farinosa, but tackifier was largely ineffective. The inherent surface roughness of trenched sites retained three times the number of seeds than compacted sites, but soil mixing during trench development likely altered the suitability of the seedbed thus resulting in poor seedling emergence. Non‐native annuals had little influence on seed fates during our study. In contrast, the prevalence of harvester ants increased seed removal on compacted sites, whereas rodent activity influenced removal on trenched sites. Future success of broadcast seeding in arid lands depends on evaluating disturbance characteristics prior to seeding and selecting appropriate species and seasons for application.     

Increasing ecological inference from high throughput sequencing of fungi in the environment through a tagging approach

High throughput sequencing methods are widely used in analyses of microbial diversity, but are generally applied to small numbers of samples, which precludes characterization of patterns of microbial diversity across space and time. We have designed a primer-tagging approach that allows pooling and subsequent sorting of numerous samples, which is directed to amplification of a region spanning the nuclear ribosomal internal transcribed spacers and partial large subunit from fungi in environmental samples. To test the method for phylogenetic biases, we constructed a controlled mixture of four taxa representing the Chytridiomycota, Zygomycota, Ascomycota and Basidiomycota. Following cloning and colony restriction fragment length polymorphism analysis, we found no significant difference in representation in 19 of the 23 tested primers. We also generated a clone library from two soil DNA extracts using two primers for each extract and compared 456 clone sequences. Community diversity statistics and contingency table tests applied to counts of operational taxonomic units revealed that the two DNA extracts differed significantly, while the pairs of tagged primers from each extract were indistinguishable. Similar results were obtained using UniFrac phylogenetic comparisons. Together, these results suggest that the pig-tagged primers can be used to increase ecological inference in high throughput sequencing projects on fungi.     

Plant attributes determining the regional abundance of weeds on central European arable land

Aim Several recent studies have aimed to identify the biological, ecological and distributional attributes that determine the regional abundance of plant species. Here we aim to assess the relationships between regional abundance and species attributes in weeds on arable land. Location Czech Republic, central Europe. Methods The relationships between regional abundance and species attributes were studied with a data set of 381 weed species occurring on arable land in the Czech Republic. Regional species abundances were estimated from their occurrence frequency in vegetation plots distributed across the country. Using regression tree models, abundance was related to the biological traits, ecological indicator values, geographical distribution and habitat range of species. The models were calculated for the entire country and separately for weeds in cereals, root crops, lowlands and uplands. The effects of phylogenetic relatedness among species on their regional abundance were quantified and compared with the effects of species attributes. Results The results were similar for the whole data set and its particular subsets. Phylogeny explained 11.2–14.9% and species attributes 16.1–56.9% of the variation in regional abundance of weed species. Removal of the phylogenetic signal did not result in important changes in the effects of particular attributes. The most abundant species were those flowering in pre‐spring and early spring, adapted to low temperatures, relatively shade tolerant and with high nutrient requirements. The high regional abundance of these species positively correlated with their broad geographical (often circumpolar) distribution and broad habitat ranges. Main conclusions The regional abundance of weeds can, to some extent, be explained by their attributes. The most important attributes are those that enable weeds to grow and reproduce in the cool season when there is limited competition with crop plants, and those that are adaptations to growth in dense vegetation stands and highly productive habitats.     

Divergence in germination traits among arctic and alpine populations of <Emphasis Type="Italic">Koenigia islandica</Emphasis>: light requirements

Light is known to regulate conservative germination strategies and the formation of seed banks. Although these strategies are crucial to survival in tundra environments—especially for annuals—light requirements for germination in arctic–alpine species are seldom investigated. Furthermore, environmental differences between arctic and alpine regions are expected to lead to evolutionary divergence among conspecific populations in seed germination strategies. In this study, we report important differences in germination light requirements among six arctic and alpine populations of the annual Koenigia islandica. Light had little effect on germination of the seeds from Iqaluit (Nunavut, Canada), Yukon (Canada), and Jasper (Alberta, Canada), whereas the seeds from the most severe climates, Svalbard (Norway) and Colorado (USA), had strong light requirements. Stratification of the seeds had little influence on their germination light requirements, with the exception of the population from Dovre (Norway), in which it induced a strong light requirement. Possible adaptive explanations and some implications of these observed germination patterns are discussed.     

Minimum area requirements of breeding birds in fragmented woodland of Central Argentina

The breeding avifauna of 25 woodland fragments (0.85–280 ha) was studied between 1996 and 2004 in Córdoba, Argentina. A distinctive feature of the avifauna of the fragments studied is the low area requirement of most of the species. Of the 54 woodland species recorded, 32 (59.3%) require c . 1 ha and 43 (79.6%) needed no more than 3 ha. Also noticeable is the relatively high number of individuals of most of the species. Both characteristics suggest a good tolerance to fragmentation. However, nine species (16.7%), the area-sensitive species, need fragments of 80 ha or larger. Moreover, eight resident species have apparently become extinct in the fragments that were studied, including the five large species that originally inhabited the area. Proportional odds and log linear models were fitted to relate the minimum area requirements of these species to various ecological characteristics (body size, diet, habitat use, migratory status, and nest type). Closed nesters, resident, woodland exterior, and medium-size species were the groups requiring larger areas. No apparent pattern was observed between area requirements and diet. A recent law prohibits woodland removal, which is a positive step towards the conservation of the fragments. The results suggest that as long as the present amount of woodland is maintained, the situation of the avifauna of the fragments is relatively secure, at least in the short term.     

Dispersal, distribution, patch network and metapopulation dynamics of the dingy skipper butterfly (Erynnis tages)

Two general approaches have usually been taken towards understanding the distributions and dynamics of localised species in heterogeneous landscapes, namely habitat characterisation and metapopulation dynamics. We show how habitat and metapopulation dynamics interact to generate a highly localised distribution of a butterfly, despite the extremely widespread nature of the butterfly’s host plant. Egg placement, macro-habitat requirements and dispersal were studied for the butterfly Erynnis tages, in North Wales, where it shows a restricted distribution relative to that of its host plant, Lotus corniculatus. Females laid eggs disproportionately on large plants growing in hollows, with intermediate cover of bare ground and high cover of L. corniculatus. Ideal macro-habitat, studied at 100-m grid resolution, consisted of areas with high host plant densities, sheltered from wind, with light or no grazing or cutting. These specialised conditions are represented as localised patches in the landscape, and define the potential habitat network, within which metapopulation dynamics take place. Although there was a moderate (22%) level of exchange of individual E. tages among local populations, the total number of potential colonists in the whole system was low because source population sizes were small (≤200 individuals at peak in any site in 1997 and 1998). Four unoccupied but apparently suitable 500-m grid squares were colonised between 1997 and 1998, and isolated habitat was less likely to be occupied. Overall, our study suggests that long-term regional persistence of E. tages is very likely to depend on metapopulation processes within the restricted patch network, rather than on the long-term survival of local populations. Received: 25 May 1999 / Accepted: 9 August 1999     

Phenotypic and genetic relationships between growth and feed intake curves and feed efficiency and amino acid requirements in the growing pig

Improvement of feed efficiency in pigs has been achieved essentially by increasing lean growth rate, which resulted in lower feed intake (FI). The objective was to evaluate the impact of strategies for improving feed efficiency on the dynamics of FI and growth in growing pigs to revisit nutrient recommendations and strategies for feed efficiency improvement. In 2010, three BWs, at 35±2, 63±9 and 107±7 kg, and daily FI during this period were recorded in three French test stations on 379 Large White and 327 French Landrace from maternal pig populations and 215 Large White from a sire population. Individual growth and FI model parameters were obtained with the InraPorc^R software and individual nutrient requirements were computed. The model parameters were explored according to feed efficiency as measured by residual feed intake (RFI) or feed conversion ratio (FCR). Animals were separated in groups of better feed efficiency (RFI⁻ or FCR⁻), medium feed efficiency and poor feed efficiency. Second, genetic relationships between feed efficiency and model parameters were estimated. Despite similar average daily gains (ADG) during the test for all RFI groups, RFI⁻ pigs had a lower initial growth rate and a higher final growth rate compared with other pigs. The same initial growth rate was found for all FCR groups, but FCR⁻ pigs had significantly higher final growth rates than other pigs, resulting in significantly different ADG. Dynamic of FI also differed between RFI or FCR groups. The calculated digestible lysine requirements, expressed in g/MJ net energy (NE), showed the same trends for RFI or FCR groups: the average requirements for the 25% most efficient animals were 13% higher than that of the 25% least efficient animals during the whole test, reaching 0.90 to 0.95 g/MJ NE at the beginning of the test, which is slightly greater than usual feed recommendations for growing pigs. Model parameters were moderately heritable (0.30±0.13 to 0.56±0.13), except for the precocity of growth (0.06±0.08). The parameter representing the quantity of feed at 50 kg BW showed a relatively high genetic correlation with RFI (0.49±0.14), and average protein deposition between 35 and 110 kg had the highest correlation with FCR (−0.76±0.08). Thus, growth and FI dynamics may be envisaged as breeding tools to improve feed efficiency. Furthermore, improvement of feed efficiency should be envisaged jointly with new feeding strategies.