Social encounter networks: characterizing Great Britain

A major goal of infectious disease epidemiology is to understand and predict the spread of infections within human populations, with the intention of better informing decisions regarding control and intervention. However, the development of fully mechanistic models of transmission requires a quantitative understanding of social interactions and collective properties of social networks. We performed a cross-sectional study of the social contacts on given days for more than 5000 respondents in England, Scotland and Wales, through postal and online survey methods. The survey was designed to elicit detailed and previously unreported measures of the immediate social network of participants relevant to infection spread. Here, we describe individual-level contact patterns, focusing on the range of heterogeneity observed and discuss the correlations between contact patterns and other socio-demographic factors. We find that the distribution of the number of contacts approximates a power-law distribution, but postulate that total contact time (which has a shorter-tailed distribution) is more epidemiologically relevant. We observe that children, public-sector and healthcare workers have the highest number of total contact hours and are therefore most likely to catch and transmit infectious disease. Our study also quantifies the transitive connections made between an individual''s contacts (or clustering); this is a key structural characteristic of social networks with important implications for disease transmission and control efficacy. Respondents'' networks exhibit high levels of clustering, which varies across social settings and increases with duration, frequency of contact and distance from home. Finally, we discuss the implications of these findings for the transmission and control of pathogens spread through close contact.     

山东省大学生生物化学实验技能大赛选题分析

通过分析山东省大学生生物化学实验技能大赛两届获奖课题的特点,找出目前大学生在该项竞赛选题中展现出来的不足,对大学生今后在此类实验技能比赛中的选题方向及方法提出了建议。     

正交试验法优选复方四参颗粒剂的提取工艺

本文研究复方四参颗粒剂的提取工艺,采用正交试验法,以丹酚酸B提取率和干膏得率为指标,考察加水量、煎煮时间和煎煮次数对提取效果的影响,确立了复方四参颗粒剂的最佳提取工艺为:加8倍量水,提取2次,第一次时间为2 h,第二次为1 h。在最佳提取工艺条件下,干膏得率为16.58%,丹酚酸B的平均量为22.42mg。与正交试验的结果相符,说明该提取方法合理、稳定、可行。     

Purification and Properties of meso-α,∊-Diaminopimelate Decarboxylase from Bacillus sphaericus

Soybean 7S and 11S globulins were stored at relative humidities (RHs) of 11% and 96% at 50°C. The redispersibility of the proteins at RH 96% decreased in a short time. However, it did not decrease, when stored for 45 days at RH 11%. Gel filtration showed that the proteins polymerized during storage. The effects of urea, sodium dodecyl sulfate (SDS) and 2-mercaptoethanol (2-ME) on the redispersibilities of the proteins at RH 96% showed that the hydrogen, hydrophobic and disulfide bonds participate in the polymerization of 7S globulin, and that the disulfide bond is strongly related to the polymerization of 11S globulin. Redispersibility was restored with 2-ME in both the 7S and 11S globulins and some of the proteins in the supernatant redispersed with 2-ME were observed to be similar to the native ones with respect to the gel filtration, electrophoretic behavior and circular dichroism spectrum.     

RNA approaches the B‐form in stacked single strand dinucleotide contexts

Duplex RNA adopts an A‐form structure, while duplex DNA interconverts between the A‐ and B‐forms depending on the environment. The C2′‐endo sugar pucker seen in B‐form DNA can occur infrequently in ribose sugars as well, but RNA is not understood to assume B‐form conformations. Through analysis of over 45,000 stacked single strand dinucleotide (SSD) crystal structure conformations, this study demonstrates that RNA is capable of adopting a wide conformational range between the canonical A‐ and B‐forms at the localized SSD level, including many B‐form‐like conformations. It does so through C2′‐endo ribose conformations in one or both nucleotides, and B‐form‐like neighboring base stacking patterns. As chemical reactions on nucleic acids involve localized changes in chemical bonds, the understanding of how enzymes distinguish between DNA and RNA nucleotides is altered by the energetic accessibility of these rare B‐form‐like RNA SSD conformations. The existence of these conformations also has direct implications in parametrization of molecular mechanics energy functions used extensively to model nucleic acid behavior., 2016. © 2015 Wiley Periodicals, Inc. Biopolymers 105: 65–82, 2016     

Stomatal acclimation to vapour pressure deficit doubles transpiration of small tree seedlings with warming

Future climate change is expected to increase temperature (T) and atmospheric vapour pressure deficit (VPD) in many regions, but the effect of persistent warming on plant stomatal behaviour is highly uncertain. We investigated the effect of experimental warming of 1.9–5.1 °C and increased VPD of 0.5–1.3 kPa on transpiration and stomatal conductance (g_s) of tree seedlings in the temperate forest understory (Duke Forest, North Carolina, USA). We observed peaked responses of transpiration to VPD in all seedlings, and the optimum VPD for transpiration (D_opt) shifted proportionally with increasing chamber VPD. Warming increased mean water use of Carya by 140% and Quercus by 150%, but had no significant effect on water use of Acer. Increased water use of ring‐porous species was attributed to (1) higher air T and (2) stomatal acclimation to VPD resulting in higher g_s and more sensitive stomata, and thereby less efficient water use. Stomatal acclimation maintained homeostasis of leaf T and carbon gain despite increased VPD, revealing that short‐term stomatal responses to VPD may not be representative of long‐term exposure. Acclimation responses differ from expectations of decreasing g_s with increasing VPD and may necessitate revision of current models based on this assumption.     

The altitudinal limit of Leptohyphes Eaton, 1882 and Lachlania Hagen, 1868 (Ephemeroptera: Leptohyphidae,Oligoneuriidae) in Ecuadorian Andes streams: searching for mechanisms

We explored mechanisms determining the upper altitudinal limit of ephemeropterans from two different genera: Leptohyphes Eaton, 1882 Eaton, A.E. (1882), ?An Announcement of New Genera of the Ephemeridae?, The Entomologist's Monthly Magazine, 18, 207–208. [Google Scholar] (Leptohyphidae) and Lachlania Hagen, 1868 Hagen, H.A. (1868), ?On Lachlania Abnormis: A New Genus and Species from Cuba Belonging to the Ephemerina?, Proceedings of the Boston Society of Natural History, 11, 372–375. [Google Scholar] (Oligoneuriidae). For this, we (1) surveyed the two taxa in 165 stream sites along a wide altitudinal gradient; (2) sampled benthic fauna at short altitudinal intervals along a stream, from 2780 to 3150 m above sea level; (3) collected adults at the lowest and highest sites; and (4) transplanted nymphs from the lowest to the highest study site in our stream to determine survival over time. Densities of the two taxa declined gradually with altitude and both disappeared between 2950 and 3080 m a.s.l. The upper altitudinal limit in the stream seemed to be most closely related to mean oxygen saturation, temperature, and current velocity. Adults were collected where the nymphs were found, but not at the upstream site where the nymphs were absent, implying limited upstream dispersal of adults and some of the altitudinal constraint lying at the adult stage. Short-term survival of transplanted nymphs was lower than that of controls, suggesting that the distribution was limited at the juvenile stage, and that at least some of the altitudinal constraint is related to the abiotic stream environment.     

Mutual Wattle Ornaments in the South Island Saddleback (Philesturnus carunculatus) Function as Armaments

Many birds have ornamental traits that are expressed in both sexes. Wattles—colorful fleshy structures that hang from the lower bill—are frequent among birds, but remain poorly understood and are generally presumed to be under sexual selection. The South Island saddleback (Philesturnus carunculatus) is an endangered bird endemic to New Zealand in which both males and females possess wattles. We used behavioral observations, morphological measures, and a playback experiment to investigate the role of wattles in saddlebacks during territorial encounters. Wattles were monomorphic when controlled for body mass, and became engorged with blood in both sexes during visual displays. In a playback experiment using male song, wattle engorgement was significantly associated with territorial intrusions in males but not in females. However, female wattle engorgement was significantly more likely during playback experiments in the absence of their mate, suggesting wattles are used in territorial defense by both sexes. The markedly similar use of wattles by both males and females in visual displays as a response to territorial intrusions supports the hypothesis that these elaborate structures function in part as armaments.