Renin cleavage of a human kidney renin substrate analogous to human angiotensinogen, H-Asp-Arg-Val-Tyr-Ile-His-Pro-Phe-His-Leu-Val-Ile-His-Ser-OH, that is human renin specific and is resistant to cathepsin D

A synthetic tetradecapeptide, H-Asp-Arg-Val-Tyr-Ile-His-Pro-Phe-His-Leu-Val-Ile-His-Ser-OH, which corresponds to the 13 amino terminal residues of human angiotensinogen plus a carboxy terminal serine to replace a suggested site of carbohydrate attachment, has been shown to be a good substrate for human kidney renin. At pH 7.2 and 37 degrees C the KM or Michaelis constant was 8.4 +/- 2.9 microM, and the VM or velocity at infinite tetradecapeptide concentration was 11.3 +/- 2.4 mumol angiotensin I made per hour per milligram renin. The tetradecapeptide was highly resistant to cleavage by mouse submaxillary renin. The tetradecapeptide was also slowly cleaved by human liver cathepsin D, by rabbit lung angiotensin-converting enzyme, and by reconstituted human serum, but did not yield angiotensin I. Thus, this synthetic renin substrate should permit more specific measurement of human kidney renin activity.     

Alterations in the structure of the electrical double layer adjacent to a charged membrane arising from electromagnetically induced changes in the activity of membrane bound enzymes

Electromagnetic fields of very low amplitude have been reported to influence a number of cellular functions. Many of these effects have a high degree of frequency specificity. Herein it is suggested that some of these reported results could be explained by a fieldinduced alteration in the enzymic activity of integral membrane proteins. It is shown that such a field-induced transition from an initial nonequilibrium steady-state to a final nonequilibrium steady-state can lead to an alteration in the concentration profiles of those charged species in the cell's ambient electrolyte that comprise the so-called electrical double layer. Examples of variations in the concentration profiles of those ions that react with a membrane-bound enzyme, as well as nonreacting ionic species, are given. The modulation of such effects by systematic variations in extracellular pH and ionic strength is discussed.     

蛹虫草MF27菌糠多糖对肝细胞氧化损伤的保护作用

蛹虫草是一种可利用大米、小麦等谷物培育的名贵药用真菌,其采收后的菌糠里仍富含许多生物活性物质。本研究立足于蛹虫草菌糠多糖,先分析其化学抗氧化活性,再以H₂O₂诱导氧化应激损伤的LO2细胞为模型,评价其对肝细胞氧化损伤的保护作用,进而解析活性多糖的单糖组分。结果显示,菌糠多糖能够有效清除DPPH自由基、羟基（?OH）自由基和ABTS自由基,EC₅₀分别为0.26mg/mL、1.03mg/mL、0.57mg/mL,提示其具有良好的抗氧化能力;在H₂O₂诱导氧化应激损伤的LO2细胞中,菌糠多糖能有效地保护细胞形态的完整性,并且随浓度梯度递增式地提高细胞存活率,当多糖浓度为5mg/mL时,细胞存活率可达91.83%;在分析其作用机制上,与模型组对比,菌糠多糖能通过调节细胞抗氧化酶SOD（提高4.91倍）和CAT（提高3.40倍）的表达来清除ROS含量（P<0.01）,降低氧化损害;经检测,虫草菌糠活性多糖主要含有葡萄糖、甘露糖、半乳糖、阿拉伯糖、葡萄糖醛酸、木糖、半乳糖醛酸、鼠李糖和岩藻糖等单糖。研究结果表明蛹虫草MF27菌糠多糖具有保护肝细胞氧化损伤的作用,为进一步开发和利用虫草菌糠提供了重要理论依据。     

How protective are refuges? Quantifying algal protection in rock crevices

1. Refuges can be functionally important if they harbour sufficient organisms during disturbance to augment population recovery. I quantified the protection of stream algae in crevice refuges using the applied, severe disturbance of scrubbing. Scrubbing effectively removed visible surface algae, and algae remaining on stones were considered protected. 2. In a field experiment, substrata with different quantities of crevice (glass bottles; greywacke; schist; pumice) were incubated in a channelised stream. The possible influence of growth conditions was investigated concurrently; half of the substrata were suspended in the water column, the rest were placed on the bottom (providing differential access to grazers and exposing them to different flow conditions). 3. Rougher substrata had greater total algal biomass than smoother substrata; this pattern resulted from more algal biomass in crevices of the rougher substrata. Protection from scrubbing ranged from about 5% of total algal biomass on glass and greywacke to 80% on pumice. In contrast, algal biomass removed by scrubbing was similar among the experimental substrata. Suspended substrata had more chironomid grazers than those on the bottom, and also greater algal biomass, possibly because of high algal concentrations in the chironomid retreats. 4. A survey of stones from three rivers supported the experimental results; namely, rough pumice protected more algae from scrubbing than did smoother greywacke. 5. In a separate experimental assay, there was no difference in algal growth on agar plates with and without added powdered rock substrata, suggesting that crevice characteristics and not substratum chemistry produced the differences in algal assemblages between rough and smooth surfaces. 6. Results indicate that rough stream stones may protect sufficient algae to augment their recovery in streams following disturbance.     

An efficient system to detect protein ubiquitination by agroinfiltration in Nicotiana benthamiana

The ubiquitination proteasome pathway has been demonstrated to regulate all plant developmental and signaling processes. E3 ligase/substrate‐specific interactions and ubiquitination play important roles in this pathway. However, due to technical limitations only a few instances of E3 ligase–substrate binding and protein ubiquitination in plants have been directly evidenced. An efficient in vivo and in vitro ubiquitination assay was developed for analysis of protein ubiquitination reactions by agroinfiltration expression of both substrates and E3 ligases in Nicotiana benthamiana. Using a detailed analysis of the well‐known E3 ligase COP1 and its substrate HY5, we demonstrated that this assay allows for fast and reliable detection of the specific interaction between the substrate and the E3 ligase, as well as the effects of MG132 and substrate ubiquitination and degradation. We were able to differentiate between the original and ubiquitinated forms of the substrate in vivo with antibodies to ubiquitin or to the target protein. We also demonstrated that the substrate and E3 ligase proteins expressed by agroinfiltration can be applied to analyze ubiquitination in in vivo or in vitro reactions. In addition, we optimized the conditions for different types of substrate and E3 ligase expression by supplementation with the gene‐silencing suppressor p19 and by time‐courses of sample collection. Finally, by testing different protein extraction buffers, we found that different types of buffer should be used for different ubiquitination analyses. This method should be adaptable to other protein modification studies.     

土壤呼吸温度敏感性的影响因素和不确定性

土壤呼吸是陆地生态系统碳循环的重要环节之一, 其对温度升高的敏感程度在很大程度上决定着全球气候变化与碳循环之间的反馈关系。为了深刻理解地下生态过程对气候变化的响应和适应,本文综述了土壤呼吸温度敏感性（Q10）的影响因子及其内在机制,并分析了当前研究存在的不确定性。土壤生物、底物质量和底物供应显著调控着土壤呼吸的Q10值,但研究结论仍然有很大差异。温度和水分等环境因子则通过对土壤生物和底物的影响而作用于土壤呼吸的温度敏感性,一般情况下,随着温度的升高,土壤呼吸的Q10值下降;水分过高或过低时Q10值降低。另外本文从土壤温度测定深度、时空尺度、土壤呼吸不同组分温度敏感性差异、激发效应以及采用方法的不同等几方面分析了温度敏感性研究存在的不确定性。并在此基础上, 指出了未来拟重点加强的研究方向:（1）土壤呼吸不同组分温度敏感性差异的机理;（2）底物质量和底物供应对温度敏感性的交互影响;（3）生物因子对土壤呼吸温度敏感性的影响。     

Nitrogen addition and rhizome severing modify clonal growth and reproductive modes of <Emphasis Type="Italic">Leymus</Emphasis> <Emphasis Type="Italic">chinensis</Emphasis> population

The resurrection flowering plant Ramonda serbica inhabits the shallow organo-mineral soil that develops in crevices on northern-facing carbonate rocks in the gorges in the Balkan Peninsula. This type of soil represents a complex substrate whose physical and chemical properties were found to be well suited to the most important requirements for the growth and development of R. serbica as well as for the plant’s survival in the state of anhydrobiosis in periods of drought stress. Considerable amount of organic matter (39.4%) in the soil resulted in the high field capacity (134 ml/100 g soil) as well as the slow changes in the amount of its available water. The suitable soil hydric status, based on the organic remains, supports the slow dehydration of this poikilohydric plant, which is extremely important in allowing the activation of the plant’s protective mechanisms. The pH of the soil solution was slighty alkaline (7.7) mostly due to carbonates in its crystallographic structure. The large amount of incompletely decomposed organic debris resulted in a marked difference between total and available nutrient concentration in the soil. Still, the adequate content of nutrients in the leaves points to efficient mineral consumption by the plant roots. The sufficient bioavailability of nutrients and water was also improved by vesicular–arbuscular mycorrhiza detected in R. serbica roots.     

Organism–quartz interactions in structuring benthic communities: towards a marine bio-mineralogy?

Abiotic and biotic factors determine the distribution and structure of marine benthic communities but the processes invoked to explain such patterns are often inadequate. We demonstrate that the presence of quartz grains in sediments inhibits animal colonization on marine soft-bottoms. We suggest that this phenomenon may be related to the oxidant properties of the quartz crystal surface derived by the generation of silicon-based radicals due to water movement. The interaction between organisms and the crystallographic structure of substrata might play a neglected but important role in structuring coastal benthic communities.     

On the ecology of Trichocercidae (Rotifera)

A material consisting of 46 trichocercid rotifers from diverse waters in south and central Sweden was analyzed to reveal their relationships to their substrate. Most species were found in a wide variety of periphytic environments, but a few seemed to be specialized on bogs or psammon, respectively. Several trichocercids are generally regarded as plankters, but some of them obviously invade the open water only on certain occasions. A few species of Trichocerca are registered as indicators of eutrophy, but in some cases only a planktic occurrence may be regarded as indicating. On the other hand, hypertrophic environments are generally avoided. Trichocerca similis prefers polyhumic environments, T. uncinata oligotrophic and running-water conditions. The occurrence is often best explained by studying the food choice.