Mineral soil carbon pool responses to forest clearing in Northeastern hardwood forests

Harvesting forests introduces substantial changes to the ecosystem, including physical and chemical alterations to the soil. In the Northeastern United States, soils account for at least 50% of total ecosystem C storage, with mineral soils comprising the majority of that storage. However, mineral soils are sometimes omitted from whole‐system C accounting models due to variability, lack of data, and sample collection challenges. This study aimed to provide a better understanding of how forest harvest affects mineral soil C pools over the century following disturbance. We hypothesized that mineral soil C pools would be lower in forests that had been harvested in the last one hundred years vs. forests that were >100 years old. We collected mineral soil cores (to 60 cm depth) from 20 forest stands across the Northeastern United States, representing seven geographic areas and a range of times since last harvest. We compared recently harvested forests to >100‐year‐old forests and used an information theoretic approach to model C pool dynamics over time after disturbance. We found no significant differences between soil C pools in >100‐year‐old and harvested forests. However, we found a significant negative relationship between time since forest harvest and the size of mineral soil C pools, which suggested a gradual decline in C pools across the region after harvesting. We found a positive trend between C : N ratio and % SOM in harvested forests, but in >100‐year‐old forests a weak negative trend was found. Our study suggests that forest harvest does cause biogeochemical changes in mineral soil, but that a small change in a C pool may be difficult to detect when comparing large, variable C pools. Our results are consistent with previous studies that found that soil C pools have a gradual and slow response to disturbance, which may last for several decades following harvest.     

Ecology – a science put to use

There is no lack of pretext for reviewing historically how ecologists have striven to gain the respect of scholars in their own and other fields, and to demonstrate the wider public-utility of their science. If self-serving, in terms of securing the scope and resources required to advance their studies in ecology, such activities have also been encouraged, and indeed commissioned, in the belief that a greater awareness and understanding of the natural world is essential for human wellbeing. Illustrative material is drawn from the British experience.     

The effects of water abstractions on invertebrate communities in U.K. streams

There are increasing concerns about the ecological effects of water abstraction and in the UK, these concerns have been hightened by the 1976, 1984 and 1988-92 droughts. This paper assesses macroinvertebrate and environmental changes induced by surface and groundwater abstractions on 22 streams throughout the UK.The approach involved comparative research to assess differences between reference and impacted sites.Using a database comprising 204 sets of biological and environmental data (89 taxa and 16 environmental variables) a preliminary ordination using principle components analysis clearly differentiated three types of sites: upland, lowland and an intermediate type. At this scale, any effects of abstractions on invertebrate communities are shown to be insignificant relative to regional controls. A simultaneous ordination of the environmental and faunal differences between pairs of sites was undertaken separately for each of the three regional groups. Differences are considered as vectors having both direction and amplitude and the analysis elucidates common patterns in the faunal and environmental data. Important changes were observed in two situations: upland streams affected by major diversions as part of hydro-power schemes in Scotland and lowland rivers impacted by groundwater abstractions.No strong patterns of change (either in amplitude or orientation) were demonstrated within any of the taxonomic groups. However, within the upland type some rheophilous taxa were shown typically to be reduced in abundance at impacted sites. Within the lowland type, a consistent pattern in the dataset is demonstrated by a group of taxa that are reduced in abundance at the impacted sites.     

Options for biodiversity conservation in managed forest landscapes of multiple ownerships in Oregon and Washington,USA

We examine existing and developing approaches to balance biodiversity conservation and timber production with the changing conservation roles of federal and nonfederal forest land ownerships in the US Pacific Northwest. At landscape scales, implementation of the reserve-matrix approach of the federal Northwest Forest Plan in 1994 was followed by proposals of alternative designs to better integrate disturbance regimes or to conserve biodiversity in landscapes of predominantly young forests through active management without reserves. At stand scales, landowners can improve habitat heterogeneity through a host of conventional and alternative silvicultural techniques. There are no state rules that explicitly require biodiversity conservation on nonfederal lands in the region. However, state forest practices rules require retention of structural legacies to enhance habitat complexity and establishment of riparian management areas to conserve aquatic ecosystems. Habitat Conservation Plans (HCPs) under the US Endangered Species Act provide regulatory incentives for nonfederal landowners to protect threatened and endangered species. A state-wide programmatic HCP has recently emerged as a multi-species conservation approach on nonfederal lands. Among voluntary incentives, the Forest Stewardship Council certification comprehensively addresses fundamental elements of biodiversity conservation; however, its tough conservation requirements may limit its coverage to relatively small land areas. Future changes in landscape management strategies on federal lands may occur without coordination with nonfederal landowners because of the differences in regulatory and voluntary incentives between ownerships. This raises concerns when potentially reduced protections on federal lands are proposed, and the capacity of the remaining landscape to compensate has been degraded. This paper was previously published in Biodiversity and Conservation, Volume 16(13) under doi:     

Identification of quantitative trait locus (QTL) linked to dorsal fin length from preliminary linkage map of molly fish, Poecilia sp.

A preliminary linkage map was constructed by applying backcross and testcross strategy using microsatellite (SSR) markers developed for Xiphophorus and Poecilia reticulata in ornamental fish, molly Poecilia sp. The linkage map having 18 SSR loci consisted of four linkage groups that spanned a map size of 516.1 cM. Association between genotypes and phenotypes was tested in a random fashion and QTL for dorsal fin length was found to be linked to locus Msb069 on linkage group 2. Coincidentally, locus Msb069 was also reported as putative homologue primer pairs containing SSRs repeat motif which encoded hSMP-1, a sex determining locus. Dorsal fin length particularly in males of Poecilia latipinna is an important feature during courtship display. Therefore, we speculate that both dorsal fin length and putative hSMP-1 gene formed a close proximity to male sexual characteristics.     

美国先进生物燃料技术政策与态势分析

美国是生物燃料大国,更是先进生物燃料研发强国。美国制定了宏大的生物燃料发展目标,采取了有力的政策支持措施,组织实施了生物质计划,将纤维素乙醇作为目前先进生物燃料研究、开发和示范的焦点,并已着手第三代生物燃料的研发。美国政府十分重视生物燃料的规划分析和部际协调工作,在立足于基础研究和应用研究前沿的基础上,大力推进技术示范与商业化,正努力加速向先进生物燃料转变。     

Forecasting climate change impacts to plant community composition in the Sonoran Desert region

Hotter and drier conditions projected for the southwestern United States can have a large impact on the abundance and composition of long‐lived desert plant species. We used long‐term vegetation monitoring results from 39 large plots across four protected sites in the Sonoran Desert region to determine how plant species have responded to past climate variability. This cross‐site analysis identified the plant species and functional types susceptible to climate change, the magnitude of their responses, and potential climate thresholds. In the relatively mesic mesquite savanna communities, perennial grasses declined with a decrease in annual precipitation, cacti increased, and there was a reversal of the Prosopis velutina expansion experienced in the 20th century in response to increasing mean annual temperature (MAT). In the more xeric Arizona Upland communities, the dominant leguminous tree, Cercidium microphyllum, declined on hillslopes, and the shrub Fouquieria splendens decreased, especially on south‐ and west‐facing slopes in response to increasing MAT. In the most xeric shrublands, the codominant species Larrea tridentata and its hemiparasite Krameria grayi decreased with a decrease in cool season precipitation and increased aridity, respectively. This regional‐scale assessment of plant species response to recent climate variability is critical for forecasting future shifts in plant community composition, structure, and productivity.     

Optimizing survey effort for burrow‐nesting seabirds

ABSTRACT Regular monitoring of seabird populations is necessary to improve our understanding of their responses to environmental change and inform conservation management. However, given the difficulty in accessing remote breeding sites and the limited resources typically available to land managers, conducting regular, extensive surveys of seabird populations is often not feasible. Our objective was to determine the minimum survey effort required to obtain accurate and precise population estimates of Short‐tailed Shearwaters (Ardenna tenuirostris) and Little Penguins (Eudyptula minor), two abundant burrowing seabird species in southeastern Australia, by comparing bootstrapped means and confidence intervals under different sampling regimes on four islands. We found that, in many cases, survey effort (the proportion of transects and quadrats along transects surveyed) could be reduced. For Short‐tailed Shearwaters, reducing the number of transects resulted in a maximum difference of 15% between the means at full survey effort and two levels of reduced survey effort. Means differed by <3% when we halved the number of quadrats. For Little Penguins, reducing the number of transects and quadrats by 50% resulted in differences of 7–40% and 4–34%, respectively, between the full and reduced survey effort means. Confidence intervals generally increased with decreasing survey effort for both species. Differences in required survey effort between the two species in our study may have been due to differences in burrow distribution on islands, with Short‐tailed Shearwater burrows generally uniformly distributed on each island and Little Penguin burrows typically occurring in patches. These would be influenced by island‐specific characteristics in concert with habitat preferences, population size, and seasonal variation in seabird abundance. Stratified sampling did not increase survey accuracy and simulations showed that large reductions in survey effort could be made under a pseudo‐random sampling regime, with mean abundance estimates similar at most levels of survey effort. For both species, reducing the proportion of pseudo‐random quadrats to 50% and 25% of the full survey effort produced confidence intervals of 12% and 21%, respectively, of the maximum, whereas a survey effort of 10% produced confidence intervals of up to 36% of the maximum for both species. A pseudo‐random sampling regime would maximize survey efficiency because considerably fewer quadrats would be required and allow development of more efficient sampling protocols and regimes.     

Taxonomy of <Emphasis Type="Italic">Koeberlinia</Emphasis> (Koeberliniaceae)

Koeberlinia has a natural amphitropical distribution that includes the deserts of central Bolivia, northern Mexico, and the southwestern United States. Despite the long recognition of only one species, K. spinosa, field, herbarium, and SEM studies support the recognition of two species. Koeberlinia spinosa of northern Mexico and adjacent United States is recognized to consist of three varieties: K. spinosa var. spinosa of northeastern Mexico and the adjacent United States, K. spinosa var. tenuispina of the Sonoran Desert of southwestern Arizona, adjacent California, and northwestern Mexico, and K. spinosa var. wivaggii from south central Texas and northern Mexico to Arizona, which is described as new. Koeberlina holacantha, endemic to the deserts of Bolivia, is proposed as new.     

The role of posttranslational modifications of α-synuclein and LRRK2 in Parkinson's disease: Potential contributions of environmental factors

Parkinson's disease (PD) is the second most common neurodegenerative disease after Alzheimer's disease (AD), and the most prevalent movement disorder. PD is characterized by dopaminergic neurodegeneration in the substantia nigra, but its etiology has yet to be established. Among several genetic variants contributing to PD pathogenesis, α-synuclein and leucine-rich repeat kinase (LRRK2) are widely associated with neuropathological phenotypes in familial and sporadic PD. α-Synuclein and LRRK2 found in Lewy bodies, a pathogenic hallmark of PD, are often posttranslationally modified. As posttranslational modifications (PTMs) are key processes in regulating the stability, localization, and function of proteins, PTMs have emerged as important modulators of α-synuclein and LRRK2 pathology. Aberrant PTMs altering phosphorylation, ubiquitination, nitration and truncation of these proteins promote PD pathogenesis, while other PTMs such as sumoylation may be protective. Although the causes of many aberrant PTMs are unknown, environmental risk factors may contribute to their aberrancy. Environmental toxicants such as rotenone and paraquat have been shown to interact with these proteins and promote their abnormal PTMs. Notably, manganese (Mn) exposure leads to a PD-like neurological disorder referred to as manganism—and induces pathogenic PTMs of α-synuclein and LRRK2. In this review, we highlight the role of PTMs of α-synuclein and LRRK2 in PD pathogenesis and discuss the impact of environmental risk factors on their aberrancy.