尖孢镰刀菌全基因组测序及其致病相关基因分析

尖孢镰刀菌是导致三七根腐病的病原之一。本研究采用Illumina高通量测序技术对三七根腐病原菌(Fusarium oxysporum)的基因组扫描测序,并进行了基因组序列分析、基因功能注释和比较基因组学分析,从全基因组水平鉴定致病相关基因。扫描结果表明,基因组大小为48.12 Mb,G+C含量为51.5%,15 746个基因编码区(CDS),其中11 330个基因(71.95%)可以在COG数据库中得到其分类信息,编码有功能的蛋白6 022个。该序列已经提交GenBank数据库,登录号为SAMN09976373。进一步分析得到细胞壁降解相关基因45个,搜索数据库中F. oxysporum MAPK级联途径组分的基因序列,与酿酒酵母中MAPK级联途径进行比对并进行系统进化分析。研究结果对深入理解尖孢镰刀菌导致三七致病的分子机理,从而进一步有效控制病害的发生具有重要意义。     

Mechanisms of lactic acid gustatory attraction in Drosophila

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Crystallicutis gen. nov. (Irpicaceae,Basidiomycota), including C. damiettensis sp. nov., found on Phoenix dactylifera (date palm) trunks in the Nile Delta of Egypt

The taxonomy of Polyporales is complicated by the variability in key morphological characters across families and genera, now being gradually resolved through molecular phylogenetic analyses. Here a new resupinate species, Crystallicutis damiettensis sp. nov. found on the decayed trunks of date palm (Phoenix dactylifera) trees in the fruit orchards of the Nile Delta region of Egypt is reported. Multigene phylogenetic analyses based on ITS, LSU, EF1α, RPB1 and RPB2 loci place this species in Irpicaceae, and forming a distinct clade with Ceraceomyces serpens and several other hitherto unnamed taxa, which we also incorporate into a new genus Crystallicutis. We name two of these species, Crystallicutis huangshanensis sp. nov. and Crystallicutis rajchenbergii sp. nov. The distinctive feature of Crystallicutis gen. nov. is the presence of crystal-encrusted hyphae in the hymenium and subiculum. Basidiomes are usually honey-yellow with white margins but there is variability in the presence of clamp connections and cystidia, as noted for other genera within Irpicacae. C. damiettensis is hitherto consistently associated with date palms killed by the red palm weevil Rhynchophorus ferrugineus, a highly damaging and invasive pest, recently spread to the Mediterranean region. C. damiettensis causes rapid wood decay by a potentially unusual white-rot mechanism and may play a role in the damage caused by R. ferrugineus.     

Deadwood substrate and species-species interactions determine the release of volatile organic compounds by wood-decaying fungi

Wood-decaying fungi in the phylum Basidiomycota play a significant role in the global carbon cycle, as they decompose deadwood effectively. Fungi may compete for utilizable substrate and growth space by producing soluble metabolites and by releasing volatile organic compounds (VOCs). We determined the role of wood substrate (Scots pine or Norway spruce) on the generation of hyphal biomass, secreted metabolites and enzyme activities, wood decomposition rate, and fungal species-species interactions on VOC release. We studied one brown-rot species (Fomitopsis pinicola) and two white-rot species (Phlebia radiata and Trichaptum abietinum) cultivated individually or in combinations. Wood substrate quality influences VOC release by the wood-decaying fungi, with signature differences caused by the decomposition trait (brown rot or white rot) and species-species interactions. VOC release was higher in the cultures of Basidiomycota than in uncolonized sawdust. Fungal biomass, decomposition activity, iron reduction, enzyme activities, oxalate anion content, and oxalic acid production explained VOC release from decaying wood.     

Symbiotic nitrogen fixation in the reproductive structures of a basidiomycete fungus

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Evaluation of Streptomyces spp. for effective management of Poria hypolateritia causing red root-rot disease in tea plants

A field study was conducted to evaluate the efficacy of indigenous biocontrol agents such as Streptomyces griseus and Streptomyces lydicus along with Bacillus subtilis and Trichoderma harzianum for controlling red root rot disease of tea plants. In response to biological treatments, disease incidence, green leaf yield, biometric and physiological parameters and organoleptic characters of made tea were assessed. Among the thirteen treatments tested, soil drenching of carbendazim was superior in terms of reducing red root rot incidence followed by combination of S. griseus and T. harzianum recorded in two consecutive field experiments. In contrast, the maximum green leaf yield and plant growth was achieved in soil application of these biocontrol agents. However, the performance of this dual combination of biocontrol agents was on par with systemic fungicide in terms of disease control. Correspondingly, the biometric, physiological and biochemical parameters were also considerably increased in biologically treated plants when compared to untreated control. The disease increased from 38.7% to 47.6% in untreated control plots and those plants were unhealthy in terms of leaf yellowing, stunted growth with heavy flowering, drying of branches and sudden death of bushes. The tea quality parameters such as theaflavin and thearubigin contents were significantly increased in the range of 0.75–1.43% and 10.38–13.22% respectively in biocontrol treated plants. This was also reflected in tea liquor characteristics. Our results suggested that the combination of biocontrol agents represent a promising alternative for effective management of red root rot disease in tea plants.     

Map-based cloning identifies velvet A as a critical component of virulence in Fusarium pseudograminearum during infection of wheat heads

Although better known as a pathogen of wheat stem bases, Fusarium pseudograminearum also causes Fusarium head blight. A natural isolate of F. pseudograminearum was identified that showed severely reduced virulence towards wheat heads and a map-based cloning approach was undertaken to identify the genetic basis of this phenotype. Using a population of 95 individuals, a single locus on chromosome 1 was shown to be responsible for the low virulence. Fine mapping narrowed the region to just five possible SNPs of which one was in the F. pseudograminearum homologue of velvet A. Knockout mutants of velvet A, which were non-pathogenic towards wheat, confirmed that velvet A regulates virulence in this pathogen. The mutation in velvet A was only found in a single field isolate and the origin of the mutation is unknown.     

Morphological characterization ofGibberella coronicola sp. nov., obtained through mating experiments ofFusarium pseudograminearum

Mating experiments were performed among 18 strains ofFusarium pseudograminearum, formerly recognized as the Group 1 population ofF. graminearum. Heterothallic production of perithecia was observed in eight out of all 153 possible combinations. Mature asci and viable ascospores were recovered in seven of the eight combinations. Perithecia in the fertile pairings were subglobose to ovoid, dark, 120–370 μm diam and formed directly on the surface of rice stems placed on the culture media. Asci were unitunicate and 8-spored when mature. Mature ascospores were primarily hyaline, fusoid, straight or curved, with rounded ends and (1-)3-septate. Dimensions of the teleomorph obtained forF. pseudograminearum were different from those of theG. zeae teleomorph ofF. Graminearum. A new species ofGibberella, G. coronicola, is described and illustrated for the teleomorph ofF. pseudograminearum. The Group 1 and Group 2 populations recognized previously withinF. graminearum differ in their anamorphic and teleomorphic morphology, ecological habitats, pathogenicity, mode of sexual reproduction and phylogenetic relationships.