Do Current Standards of Practice in Canada Measure What is Relevant to Human Exposure at Contaminated Sites? II: Oral Bioaccessibility of Contaminants in Soil

Human health risk estimates for sites with contaminated soils are often based on the assumption that the outdoor soil sieved to < 250 μm is a reasonable surrogate for predicting exposures via incidental soil ingestion. In vitro bioaccessibility tests are also increasingly used to “improve” ingestion exposure predictions of contaminants at different sites. However, when considered in terms of factors that influence desorption of contaminants from particles and uptake into humans, available studies indicate that current “standards of practice” with respect to assays of oral bioaccessibility have a number of significant shortcomings, at least in Canada. These shortcomings are discussed and various factors that influence the assessment of bioaccessibility of contaminants in soils are examined. We finish with proposing some minimum data submission requirements to support the application and relevance of bioaccessibility assays at contaminated sites.     

Temporal variation in plant-soil feedback controls succession

Soil abiotic and biotic factors play key roles in plant community dynamics. However, little is known about how soil biota influence vegetation changes over time. Here, we show that the effects of soil organisms may depend on both the successional development of ecosystems and on the successional position of the plants involved. In model systems of plants and soils from different successional stages, we observed negative plant–soil feedback for early-successional plant species, neutral feedback for mid-successional species, and positive feedback for late-successional species. The negative feedback of early-successional plants was independent of soil origin, while late-successional plants performed best in late- and worst in early-successional soil. Increased performance of the subordinate, late-successional plants resulted in enhanced plant community diversity. Observed feedback effects were more related to soil biota than to abiotic conditions. Our results show that temporal variations in plant–soil interactions profoundly contribute to plant community assemblage and ecosystem development.     

Cropping systems for phytoremediation of phosphorus-enriched soils

Eutrophication of freshwater bodies is frequently attributed to elevated phosphorus (P) concentrations in surface runoff from P-enriched agricultural soils. Forage and grain-cropping systems were compared for their effectiveness at remediating P-enriched soils. At each of four locations, one of three forage systems (Forage I = cereal rye silage and corn silage annually; Forage II = alfalfa; Forage III = annual ryegrass and corn silage annually) and the grain system (corn, small grain, and soybean rotation) were maintained for 3 yr on soils with five distinct initial soil P concentrations that were established by using four annual applications (1994-1997) of five different rates (0, 100, 200, 300, and 400 kg total P ha(-1) y(-1)) of poultry manure, dairy manure, or commercial fertilizer. Across all manure P treatments at all locations, the forage systems had greater removal of P than the grain system. Soil P concentration changes (2001-2004) did not reflect differences in crop P removal. Few significant reductions in soil P concentration were observed for either crop system. When reductions did occur, they were for the more highly enriched soil P treatments. No significant reductions in soil P concentration have occurred for the lowest manure P treatments. Considerable variability in crop P concentrations was observed among species at locations and among years produced. However, crop P concentrations did increase uniformly as soil P concentration increased, indicating that luxury consumption of P does occur in agronomic species produced on P-enriched soils.     

Efficiency of biochar,nitrogen addition,and microbial agent amendments in remediation of soil properties and microbial community in Qilian Mountains mine soils

Lacking systematic evaluations in soil quality and microbial community recovery after different amendments addition limits optimization of amendments combination in coal mine soils. We performed a short‐term incubation experiment with a varying temperature over 12 weeks to assess the effects of three amendments (biochar: C; nitrogen fertilizer at three levels: N‐N1~N3; microbial agent at two levels: M‐M1~M2) based on C/N ratio (regulated by biochar and N level: 35:1, 25:1, 12.5:1) on mine soil properties and microbial community in the Qilian Mountains, China. Over the incubation period, soil pH and MBC/MBN were significantly lower than unamended treatment in N addition and C + M + N treatments, respectively. Soil organic carbon (SOC), total nitrogen (TN), available nitrogen (AN), available phosphorus (AP), available potassium (AK), microbial biomass carbon (MBC), and nitrogen (MBN) contents increased significantly in all amended treatments (p < .001). Higher AP, AK, MBC, MBN, and lower MBC/MBN were observed in N2‐treated soil (corresponding to C/N ratio of 25:1). Meanwhile, N2‐treated soil significantly increased species richness and diversity of soil bacterial community (p < .05). Principal coordinate analysis further showed that soil bacterial community compositions were significantly separated by N level. C‐M‐N treatments significantly increased the relative abundance (>1%) of the bacterial phyla Bacteroidetes and Firmicutes, and decreased the relative abundance of fungal phyla Chytridiomycota (p < .05). Redundancy analysis illustrated the importance of soil nutrients in explaining variability in bacterial community composition (74.73%) than fungal composition (35.0%). Our results indicated that N addition based on biochar and M can improve soil quality by neutralizing soil pH and increasing soil nutrient contents in short‐term, and the appropriate C/N ratio (25:1) can better promote microbial mass, richness, and diversity of soil bacterial community. Our study provided a new insight for achieving restoration of damaged habitats by changing microbial structure, diversity, and mass by regulating C/N ratio of amendments.     

Detecting un-authorized genetically modified organisms (GMOs) and derived materials

Genetically modified plants, in the following referred to as genetically modified organisms or GMOs, have been commercially grown for almost two decades. In 2010 approximately 10% of the total global crop acreage was planted with GMOs (James, 2011). More than 30 countries have been growing commercial GMOs, and many more have performed field trials. Although the majority of commercial GMOs both in terms of acreage and specific events belong to the four species: soybean, maize, cotton and rapeseed, there are another 20 + species where GMOs are commercialized or in the pipeline for commercialization. The number of GMOs cultivated in field trials or for commercial production has constantly increased during this time period. So have the number of species, the number of countries involved, the diversity of novel (added) genetic elements and the global trade. All of these factors contribute to the increasing complexity of detecting and correctly identifying GMO derived material. Many jurisdictions, including the European Union (EU), legally distinguish between authorized (and therefore legal) and un-authorized (and therefore illegal) GMOs. Information about the developments, field trials, authorizations, cultivation, trade and observations made in the official GMO control laboratories in different countries around the world is often limited, despite several attempts such as the OECD BioTrack for voluntary dissemination of data. This lack of information inevitably makes it challenging to detect and identify GMOs, especially the un-authorized GMOs. The present paper reviews the state of the art technologies and approaches in light of coverage, practicability, sensitivity and limitations. Emphasis is put on exemplifying practical detection of un-authorized GMOs. Although this paper has a European (EU) bias when examples are given, the contents have global relevance.     

Density Effects of a Dominant Understory Herb,Isoglossa woodii (Acanthaceae), on Tree Seedlings of a Subtropical Coastal Dune Forest

Suppression of tree seedlings by the understory is an important ecological filter with implications for tree diversity and dynamics. In a greenhouse competition experiment, we used seedlings of four canopy species from coastal dune forest (Diospyros natalensis, Euclea racemosa, Sideroxylon inerme and Apodytes dimidiata) to examine the relative competitive effects of the dominant understory herb Isoglossa woodii on seedling performance. We manipulated I. woodii density, light and nutrient levels and measured growth responses. Total seedling biomass decreased with density of I. woodii. The magnitude of biomass suppression with competitor density was similar among tree species. Consequently there was no discernable hierarchy of competitive ranking among tree species. The relative growth rate of seedlings decreased at higher densities of I. woodii and increased at higher nutrient levels but was unaffected by variation in light conditions. Aboveground biomass decreased at higher densities of I. woodii and at higher light levels but increased at higher nutrient levels. Size asymmetric competition for light and nutrients may be the major driver of aboveground interactions between tree seedling and I. woodii. While tree species showed no hierarchy of competitive ability their seedlings exhibited equivalent responses to competition from an understory dominant, permitting species coexistence and the maintenance of species diversity.     

Soil Effects on Forest Structure and Diversity in a Moist and a Dry Tropical Forest

Soil characteristics are important drivers of variation in wet tropical forest structure and diversity, but few studies have evaluated these relationships in drier forest types. Using tree and soil data from 48 and 32 1 ha plots, respectively, in a Bolivian moist and dry forest, we asked how soil conditions affect forest structure and diversity within each of the two forest types. After correcting for spatial effects, soil‐vegetation relationships differed between the dry and the moist forest, being strongest in the dry forest. Furthermore, we hypothesized that soil nutrients would play a more important role in the moist forest than in the dry forest because vegetation in the moist forest is less constrained by water availability and thus can show its full potential response to soil fertility. However, contrary to our expectations, we found that soil fertility explained a larger number of forest variables in the dry forest (50 percent) than in the moist forest (17 percent). Shannon diversity declined with soil fertility at both sites, probably because the most dominant, shade‐tolerant species strongly increased in abundance as soil fertility increased.     

Soil Nematode Responses to Crop Management and Conversion to Native Grasses

Soil nematode community response to treatments of three, four-year crop rotations (spring wheat-pea-spring wheat-flax, spring wheat-green manure-spring wheat-flax, and spring wheat-alfalfa-alfalfa-flax) under conventional and organic management, and native tall grass restoration (restored prairie) were assessed in June 2003, and July and August 2004. The research site was the Glenlea Long-term Rotation and Crop Management Study, in the Red River Valley, Manitoba, established in 1992. The nematode community varied more with sample occasion than management and rotation. The restored prairie favored high colonizer-persister (c-p) value omnivores and carnivores, and fungivores but less bacterivores. The restored prairie soil food web was highly structured, mature and low-to-moderately enriched as indicated by structure (SI), maturity (MI) and enrichment (EI) index values, respectively. Higher abundance of fungivores and channel index (CI) values suggested fungal-dominated decomposition. Nematode diversity was low even after more than a decade of restoration. A longer time may be required to attain higher diversity for this restored fragmented prairie site distant from native prairies. No consistent differences were found between organic and conventional management for nematode trophic abundance, with the exception of enrichment opportunists of the c-p 1 group which were favored by conventional management. Although EI was lower and SI was higher for organic than conventional their absolute values suggested decomposition channels to be primarily bacterial, and fewer trophic links with both management scenarios. A high abundance of fungivores in the rotation including the green manure indicates greater fungal decomposition.     

Reflections on Plant and Soil Nematode Ecology: Past,Present and Future

The purpose of this review is to highlight key developments in nematode ecology from its beginnings to where it stands today as a discipline within nematology. Emerging areas of research appear to be driven by crop production constraints, environmental health concerns, and advances in technology. In contrast to past ecological studies which mainly focused on management of plant-parasitic nematodes, current studies reflect differential sensitivity of nematode faunae. These differences, identified in both aquatic and terrestrial environments include response to stressors, environmental conditions, and management practices. Methodological advances will continue to influence the role nematodes have in addressing the nature of interactions between organisms, and of organisms with their environments. In particular, the C. elegans genetic model, nematode faunal analysis and nematode metagenetic analysis can be used by ecologists generally and not restricted to nematologists.     

Predation of the oriental fruit fly,Bactrocera dorsalis puparia by the red imported fire ant,Solenopsis invicta: role of host olfactory cues and soil depth

Predation by red imported fire ants, Solenopsis invicta on oriental fruit fly, Bactrocera dorsalis puparia was evaluated. No significant olfactory response of the workers was observed at 0, 2 and 4 days after fly pupation, whereas the workers were significantly attracted by the 6th day old puparia. We found S. invicta that predated on puparia of B. dorsalis in the field. The predation rate was negatively correlated with the depth of puparia in the soil. The predation rate was 70% at 4 cm depth; whereas, zero predation rate was observed at 6 cm depth. The predation rate was also significantly affected by soil moisture. The predation rate was 66.5% and 72.1% at soil moisture values of 40% and 80%, respectively, and no predation occurred at soil moisture value of 0%.