Movement of sturgeons (Acipenser oxyrinchus oxyrinchus and A. fulvescens) in the St. Lawrence Estuary: A 35-year tagging study

Movement of Atlantic sturgeon (Acipenser oxyrinchus oxyrinchus) and lake sturgeon (A. fulvescens) in the St. Lawrence Estuary (Québec, Canada) are not fully understood. To assess the movement extent of both species, a mark–recapture study was conducted in collaboration with commercial fishermen operating in the St. Lawrence Estuary. Between 1981 and 2015, 3,367 Atlantic sturgeon (fork length 21.8–199.5 cm) and 3,180 lake sturgeon (fork length 17.8–190.8 cm) were tagged and released. Of these, 673 Atlantic sturgeon and 42 lake sturgeon were recaptured. The maximum distances traveled between capture and recapture locations were 1,307 km for Atlantic sturgeon (8 years after initial capture) and 252 km for lake sturgeon (less than 1 year after initial capture). Statistical analyses identified differences in the dispersal distance of both species as revealed by a first component characterized by individuals with short dispersal distances (98% and <35 km for Atlantic sturgeon; 58% and <1 km for lake sturgeon) and a second component characterized by individuals with longer dispersal distances (2% and >600 km for Atlantic sturgeon; 42% and >190 km for lake sturgeon). We suggest that the short dispersal distances detected in the vast majority of Atlantic sturgeon recaptures likely reflect strong site fidelity, highlighting the importance of the St. Lawrence Estuary as a preferred habitat for juveniles and subadults. Although recaptures were low for lake sturgeon because this species is only marginally targeted by commercial fishermen in the St. Lawrence Estuary, our results also showed that this species uses estuarine habitats and that half of the population seems to exhibit strong site fidelity (67% of individuals were recaptured within 2 km).     

Draft Genome Sequence of Amphibacillus jilinensis Y1T,a Facultatively Anaerobic,Alkaliphilic and Halotolerant Bacterium

The genus Amphibacillus was established in 1990, and seven additional species were described in the past two decades. Amphibacillus jilinensis Y1^T is a facultatively anaerobic and alkaliphilic bacterium isolated from a soda lake in China. Here we describe the structural and genetic features of the draft genome about the type strain Y1^T (3,831,075 bp, with a G+C content of 37.27%). This is the first genome report of the Amphibacillus genus.     

THE LAKE ST. LUCIA SYSTEM—A RESEARCH ASSESSMENT

SUMMARY

This paper assesses the research undertaken at Lake St. Lucia over the past 25 years based on over 300 documents from that period. Trends related to both time and subject matter are evident, and these are considered in relation to the gaps in our current knowledge concerning the system.

A feature evident throughout the period under consideration is that the major portion of documented material available relates to reports and contributions to workshops (77%) with only 23% from scientific publications. Contributions by these two sources to the subject group being considered for St. Lucia are markedly different with research publications dominating the biological field and reports dominating in physical aspects, catchment characteristics, man's activities, management, dredging and hydrological modelling. However, some 55% of all unpublished data related to reviews or assessments of the state of research on St. Lucia.

The importance of the scientific publications group as an indicator of the state of research into the system is considered in the light of an apparent decline in the number of completed projects being published. It is also considered in the light of the recent establishment of a co-ordinated Lake St. Lucia Research Programme, which may provide the impetus for a more concentrated and directed research effort on the Lake System.     

Use of environmental DNA to detect Eastern Sand Darter (Ammocrypta pellucida Putnam, 1863) in large Laurentian Great Lakes embayments

A single-species environmental DNA (eDNA) method was developed to sample for a small, benthic rare species, Eastern Sand Darter (Ammocrypta pellucida Putnam, 1863) in two large Lake Ontario embayments. Summer water sampling allowed for: (a) surveys of habitats (Wellers Bay) where traditional fish sampling gear could not be used; and, (b) a comparison between eDNA and seining-based detection probabilities at known occupied habitats (West Lake). In 2018, replicate (n = 3) 1 L water samples were collected from 90 Wellers Bay sites and 71 West Lake sites. A site-occupancy model, a hierarchical logistic regression model, was fitted to determine site occupancy, sample occupancy (presence of Eastern Sand Darter DNA in a water sample) and probability of detection (p) based on replicate quantitative polymerase chain reaction (qPCR) results for each water sample. Eastern Sand Darter was detected at 10 West Lake sites, but not from Wellers Bay. Mean site occupancy was 0.31 (0.12–0.70; 95% CLs), mean sample occupancy was 0.28 (0.09–0.58; 95% CLs), and mean detection probability in a subsample (i.e., successful qPCR amplification) given it was present was 0.40 (0.25–0.55; 95% CLs). While the eDNA method successfully detected Eastern Sand Darter from known occupied areas in West Lake, it was not more effective for assessing local site occupancy than traditional sampling methods, such as the seine.     

Bioturbation in matgrounds at Lake Bogoria in the Kenya Rift Valley: implications for interpreting the heterogeneous early Cambrian seafloor

Modern burrowing organisms feed on microbial organic matter in matgrounds near hot springs on the margins of Lake Bogoria, a saline alkaline lake in the Kenya Rift Valley. The burrowers produce a low-diversity trace assemblage similar to those produced by undermat miners during the Ediacaran–Cambrian transition. Despite obvious differences in body plans and phylogenetic affinities, these modern animals feed on microbes in similar ways to those inferred for primitive bilaterians. With increasing distance from hot-spring vents, outflow channels and adjacent matgrounds, the diversity and depth of the traces increase and mixgrounds become dominant. This modern extreme environment gives clues for interpreting the heterogeneous early Cambrian seafloor, with: (1) the restriction of ‘pre-agronomic revolution’ matground substrates; and (2) expansion of adjacent ‘post-agronomic revolution’ mixground areas.     

Assessment of lake sturgeon (Acipenser fulvescens) recruitment in a regulated spawning tributary of Rainy Lake,Ontario

Continued study of the relationship between lake sturgeon (Acipenser fulvescens) recruitment and hydroelectric dams and operations, in a variety of river systems and habitat types is needed to improve the ability to predict and monitor impacts of the hydroelectric industry on this species. Herein, we present results of a juvenile lake sturgeon study aimed at addressing concerns over an inferred lack of recruitment resulting from spawning downstream of a hydroelectric generating station (HGS). Two years of sampling (2015 and 2016) were conducted in five sections of a 41 km long reach of the Seine River, Ontario, a lake sturgeon spawning tributary of Rainy Lake. Using an established gillnetting method, deepwater habitat was targeted to capture juvenile lake sturgeon to assess relative abundance, recruitment (cohort strength), and growth. Deepwater habitat, defined as water depths >6 m in this system, comprised only 2.1% of the wetted area in this study area. Within these habitats, a total of 331 lake sturgeon capture events were observed over the 2-years study period. The majority of the lake sturgeon catch (85%) was comprised of age-0 to age-5 individuals (both sampling years combined). Although inter-annual variation in cohort strength was apparent, each cohort between 2006 and 2016 was represented. The spatial distribution of cohorts varied among river reaches with younger individuals (age-0 and age-1) occupying reaches proximal to the Sturgeon Falls HGS, and larger, older individuals (age-2 to age-5) occupying reaches further downstream. The rarity of age-6+ individuals can likely be explained by ongoing downstream redistribution of juveniles over time, out of the Seine River and into Rainy Lake. Growth of juvenile lake sturgeon captured in the Seine River was above average relative to conspecifics from other rivers in the Hudson Bay drainage. Unfortunately, baseline data sets required to facilitate comparisons of contemporary (post-construction Sturgeon Falls HGS) versus historical (i.e. pre- Sturgeon Falls HGS) lake sturgeon recruitment, or to evaluate the influence of the Seine River Water Management Plan (2004) on lake sturgeon recruitment, are lacking. However, juvenile Lake Sturgeon are more abundant in this system than what had been surmised based on recent studies which implemented random sampling. Results indicate that juvenile lake sturgeon may reside in spawning tributaries for several years (age-0 to age-5) prior to seeking alternate habitats and highlights the value of targeted sampling (i.e. by depth) along the flow axis of rivers downstream of spawning areas when assessing lake sturgeon recruitment patterns.     

Diversity of sulfur-cycle prokaryotes in freshwater lake sediments investigated using aprA as the functional marker gene

The diversity of sulfate-reducing prokaryotes (SRPs) and sulfur-oxidizing prokaryotes (SOPs) in freshwater lake ecosystems was investigated by cloning and sequencing of the aprA gene, which encodes for a key enzyme in dissimilatory sulfate reduction and sulfur oxidation. To understand their diversity better, the spatial distribution of aprA genes was investigated in sediments collected from six geographically distant lakes in Antarctica and Japan, including a hypersaline lake for comparison. The microbial community compositions of freshwater sediments and a hypersaline sediment showed notable differences. The clones affiliated with Desulfobacteraceae and Desulfobulbaceae were frequently detected in all freshwater lake sediments. The SOP community was mainly composed of four major phylogenetic groups. One of them formed a monophyletic cluster with a sulfur-oxidizing betaproteobacterium, Sulfuricella denitrificans, but the others were not assigned to specific genera. In addition, the AprA sequences, which were not clearly affiliated to either SRP or SOP lineages, dominated the libraries from four freshwater lake sediments. The results showed the wide distribution of some sulfur-cycle prokaryotes across geographical distances and supported the idea that metabolic flexibility is an important feature for SRP survival in low-sulfate environments.     

The Life Cycle of Lestes viridis (Odonata: Lestidae) in Two Seasonal Streams of the Sierra Morena Mountains (Southern Spain)

The life cycle of the zygopteran odonate Lestes viridis in two seasonal streams in the Sierra Morena Mountains is inferred from size-frequency analyses of handnet samples of larvae and records of presence and reproductive activity of adults during three consecutive years. The egg stage (duration 5–6 months) overwinters, larval development is brief (6–8 weeks) and adults undergo a protracted, prereproductive, summer diapause (up to 3 months) before mating and ovipositing in late September, about one week after the first appreciable fall of rain, but before surface water reappears in the streams after having been absent for about four months during the hot, dry summer. Comparison between this life cycle and those of more northerly populations reveals a latitude-correlated cline in phenology resembling that found in some other northern hemisphere odonates that, like L. viridis, maintain an obligatorily univoltine life cycle at different latitudes.     

Limnophyes (Diptera: Chironomidae) from northwestern Russia

The nominal family group taxa of the Ephemeroptera are listed along with their authors, dates of publication and bibliographic references.     

Fractionation of metals in the Sa1/2 sediment core from Lake Sarbsko (northern Poland) and its palaeolimnological implications

Abstract

This article documents and interprets stratigraphical changes in fractionation of Fe, Mn, Mg, K, Pb, Cu and Zn in the Sa1/2 sediment core from a coastal freshwater lake, Lake Sarbsko (northern Poland). The elements were sequentially extracted from the samples to distinguish five geochemical fractions: exchangeable, acid-extractable, reducible, oxidisable and residual. The analyses revealed substantial variations in geochemical partitioning of the elements and showed no correlation between the fractionation patterns and lithology of the sediments. In the sediments of Lake Sarbsko, iron is mainly bound to sulfides. Potassium occurs in its residual form. Magnesium and zinc are associated with carbonates and aluminosilicates, while copper occurs in compounds with organic matter and sulfides. Lead is found in connection with aluminosilicates and, to a lesser extent, with sulfides and organic matter. Manganese is partitioned between the oxidisable, acid-extractable, and exchangeable fractions. Heavy metals and potassium display the overall tendency to reduce the contents of their residual forms towards the top of the depositional sequence. Fe, Mn, Mg and Zn were found to be the most susceptible to post-sedimentary mobilisation.