Habitat engineering by the invasive zebra mussel <Emphasis Type="Italic">Dreissena polymorpha</Emphasis> (Pallas) in a boreal coastal lagoon: impact on biodiversity

Habitat engineering role of the invasive zebra mussel Dreissena polymorpha (Pallas) was studied in the Curonian lagoon, a shallow water body in the SE Baltic. Impacts of live zebra mussel clumps and its shell deposits on benthic biodiversity were differentiated and referred to unmodified (bare) sediments. Zebra mussel bed was distinguished from other habitat types by higher benthic invertebrate biomass, abundance, and species richness. The impact of live mussels on biodiversity was more pronounced than the effect of shell deposits. The structure of macrofaunal community in the habitats with >10³ g/m² of shell deposits devoid of live mussels was similar to that found within the zebra mussel bed. There was a continuous shift in species composition and abundance along the gradient ‘bare sediments—shell deposits—zebra mussel bed’. The engineering impact of zebra mussel on the benthic community became apparent both in individual patches and landscape-level analyses.     

The role of pH on instability and aggregation of sickle hemoglobin solutions

Understanding the physical basis of protein aggregation covers strong physical and biomedical interests. Sickle hemoglobin (HbS) is a point-mutant form of normal human adult hemoglobin (HbA). It is responsible for the first identified "molecular disease," as its propensity to aggregation is responsible for sickle cell disease. At moderately higher than physiological pH value, this propensity is inhibited: The rate of aggregate nucleation becomes exceedingly small and solubility after polymerization increases. These order-of-magnitude effects on polymer nucleation rates and concurrent relatively modest changes of solubility after polymerization are here shown to be related to both pH-induced changes of location and shape of the liquid-liquid demixing (LLD) region. This allows establishment of a self-consistent contact between the thermodynamics of the solution as such (i.e., the LLD region), the kinetics of fiber nucleation, the theory of percolation, and the thermodynamics of gelation. The observed pH-induced changes are largely attributable to strong perturbations of hydrophobic hydration configurations and related free energy by electric charges. Similar mechanisms of effective control of aggregate nucleation rates by means of agents such as cosolutes, pH, salts, and additives, shifting the LLD and associated regions of anomalous fluctuations, promise to be relevant to the whole field of protein aggregation pathologies.     

Jurassic soft–bottom oyster Crassostrea from Japan

A new species of oyster, Crassostrea tetoriensis , is described from the lower part of the Middle Jurassic–Cretaceous Tetori Group. This is the oldest record of the genus and one of the earliest muddy–bottom–dwelling oysters. Characteristics of the species include an elongate spatulate outline and narrow attachment area, an elongate hinge area with deep umbonal cavity, a reniform adductor muscle scar, and a smooth commissural margin without chomata. The oysters are cemented to each other and constitute bouquet–like aggregates or colonies of shells in muddy deposits of inferred brackish–water origin. The shells contain lenticular or blister–like chambers filled with a chalky deposit. These ecological and structural properties are characteristic of Crassostrea , and may be regarded as the result of adaptation of the sessile, suspension feeding animals to soft muddy substrates. Oysters are a group of bivalves that have lost mobility and live cemented mostly to hard substrates. Crassostrea and its allies returned secondarily to soft bottoms. The find of C. tetoriensis indicates that the return occurred early in the history of oysters, 60 myr after the first appearance of ostreid oysters in Late Triassic.     

Paleoecologic,temporal, and spatial analysis of early Silurian Reefs of the Chicotte Formation,Anticosti Island,Quebec, Canada

Summary Reefs of the Lower Silurian Chicotte Formation are the largest and most faunally diverse known on Anticosti Island, Quebec. They reach up to 25 m in thickness and 250 m in diameter and are present predominantly at two intervals, forming a lower and upper reef cluster. Remnants of bioherms are represented on the present-day wave-cut terrace as 60 to 100 m diameter, subcircular erosional depressions known as Philip structures or as outcrop. The bioherms were relatively low structures, with approximately 3 to 5 m maximum synoptic relief, some of which developed on hardgrounds and possible paleokarst surfaces of crinoidal wackestone and packstone. Dominant skeletal framework builders and sediment producers within all of the reefs are laminar to low domical stromatoporoids, colonial cerioid and fasciculate rugose corals, colonial tabulate corals, and cryptostome bryozoans. Vertical zonation of reef biota is evident within well-exposed reefs of the lower reef cluster. Three to four stages are recognizable:1) a low-diversity tabulate coral-dominatedpioneering community including large tabulate coral colonies (halysitids and favositids), and few stromatoporoids (clathrodictyids, ecclimadictyids), fasciculate rugosans, large generally monotypic stalked crinoids, and shelly benthos (brachiopods, few ostracodes and trilobites);2) an intermediate- to high-diversity, mixed tabulate coral-stromatoporoid-dominatedreef-core community;3) a slightly lower diversity stromatoporoid-tabulate coral-dominatedclimax community with laminar coenitids and alveolitids; and,4) in a few localities, a capping, low-diversity tabulatecoral-dominated (alveolitid and coenitid), and stromatoporoid-bearing community comprising laminar forms. Amelioration of Early Silurian climates, following Late Ordovician glaciation, allowed gradual reestablishment of extensive shallow-water reef growth, by mainly new and increasingly diverse genera and species of metazoans. Reef development within the Chicotte Formation coincided with global, widespread development of latest Llandovery and earliest Wenlock reefs in subtropical to tropical areas. Chicotte reefs have broad characteristics, in terms of overall biotic composition, vertical successions recognized, and paleogeographic setting, similar to those of equivalent and slightly younger age from intracratonic settings in Baltica (Gotland, Sweden and Estonia) and central and northern Laurentia (Midcontinent, U.S.A.; Hudson Bay, Canada; and North Greenland, Denmark).     

Diatom assemblages along a former intertidal gradient: A palaeoecological study of a subboreal clay layer (Western coastal plain,Belgium)

Lateral and vertical variations in diatom taphocoenoses were studied in a clayey intercalation in the upper peat bed at Booitshoeke (western coastal plain, Belgium). The palaeoecological evolution, linked to sedimentary facies changes along the ecotone from fen to tidal flat, apparently involved two successive periods of increased local tidal activity. This result could be inferred from a weakly developed salt-marsh horizon within the clay, traceable by diatom analysis over a distance of a few hundred meters. Although influenced by taphonomic processes, the composition of the fossil assemblages appeared to reflect the relative position of the palaeoenvironment along the tidal gradient fairly accurately. Taphonomic groups of taxa could be distinguished, characterizing respectively the transition from fen to salt-marsh, the high salt-marsh, the low salt-marsh and high mud-flat, and the more polyhaline mud-flat. Sediments of drier salt-marsh conditions showed a very poor taphocoenosis, of mainly allochthonous origin, dominated by marine tychoplanktonic species with durable frustules. Some possible causes for the slight increase in marine activity during the mid-Subboreal, which resulted in the formation of the deposits considered here, are discussed.     

Palaeoenvironmental research on diatoms in early and middle Holocene deposits in central North Holland (The Netherlands)

In the geological research of the Holocene coastal deposits of The Netherlands, diatoms are used to reconstruct the sedimentary facies, palaeo-tide levels and salinity gradients during the deposition of the sediments. In this paper, the results of diatom research from 4 borings, taken from the early and middle Holocene deposits of central North Holland are presented. The oldest marine influenced sediments in the area are the deposits of the ‘Velsen layer’, a clay layer rich in organic matter and deposited about 8000–7000¹⁴C years before present (BP) at a depth of 20–12 m below present mean sea-level. This clay layer was formed in a shallow, permanently submerged environment with a limited tidal influence (lagoonal or pond-like conditions). The salinity changed from brackish/freshwater to marine/brackish. The younger sandy and clayey sediments, formed about 7000–4500 BP at a depth of 16–3 m below present mean sea-level, are classified as ‘tidal channel’ and ‘interchannel’ deposits. It is argued, on the base of both diatom and non-diatom criteria, that the lower and middle parts of the interchannel deposits in the central area of the palaeo-tidal basin of North Holland were formed in a subtidal environment. The upper part of the interchannel deposits and the deposits at the fringe of the North Holland tidal basin were formed in the intertidal zone or, at the fringe of the basin, even in the supratidal zone. The salinity in the North Holland tidal basin during the sedimentation of the tidal channel and interchannel deposits was marine/brackish to marine. This study indicates that diatoms, besides their palaeoecological applications, have chronostratigraphical significance (on a regional scale). The diatomsCymatosira belgica andActinoptychus splendens appear to be a useful (eco)stratigraphical marker in the Holocene coastal deposits of The Netherlands and Belgium.     

山东济阳坳陷古近系沙河街组深水湖沉积中的遗迹化石

山东济阳坳陷古近系沙河街组深水湖沉积地层主要由深灰色、褐灰色泥岩、油泥岩、泥灰岩和石灰岩以及岩盐组成,浊流沉积发育。已发现深水型遗迹化石有12个遗迹属14个遗迹种,包括3个新遗迹属6个新遗迹种。根据这些遗迹化石的组成与分布特征及其围岩的沉积特征,可以划分出2种不同沉积环境下的遗迹化石群落,即(1)Mermoides-Neonereites遗迹群落,主要由觅食迹(Fodinichnia)和牧食迹(Pascichnia)组成,常见分子有Mermoides chezhenensis,Mermoides latiusculus,Neonereites uniserialis,Hel minthoidichnitescf.tenuis,Hel-minthopsis abeli,Pilichnus lacustris,Multilagueichnus lingpanensis,Cochlichnus anguineus,Gordiaichnosp.,Palaeophycus tubularis和Planolites beverleyensis等,它们被解释形成于半深水湖或较深水湖沉积环境;(2)Semi-rotundichnus遗迹群落,以半圆形、小碟形牧食迹为其特征,典型组成分子有Semirotundichnus dongyingensis,Pa-tellarisichnus boxingensis和Neonereites uniserialis等,它们均产生于深水湖沉积环境。     

Toe-of-slope deposits of a Givetian reef-rimmed platform: provenance of calcareous density-flow deposits (Rabat-Tiflet-Zone,Morocco)

Givetian subaqueous density-flow deposits reveal the existence of a peritidal carbonate platform in sedimentary basins preserved within the Rabat-Tiflet-Zone of Morocco. The calcareous component assemblage displays a photozoan carbonate production mode of the neritic source environments. Characteristic elements of the allochthonous faunal association are colonial tabulate corals, stromatoporoids, crinoids, bryozoans and thick-shelled brachiopods. Active growing reefs and cortoid sand shoals at the platform margin as well as periplatform carbonates at the uppermost slope settings contributed bioclastic and lithoclastic lime debris to the toe-of-slope of the carbonate apron. Bipartite cobble rudstone beds are interpreted as deposits of hyperconcentrated density flows, which cannot be maintained on very low-angle slopes for as long as more dilute flows and represent short run-out distances. Beds consisting of mostly well-organized pebbly grainstones, packstones and grainstone-wackestone couplets are deposits of surge-like concentrated flows and turbidity flows.     

HIV-1 increases extracellular amyloid-beta levels through neprilysin regulation in primary cultures of human astrocytes

Since the success of combined antiretroviral therapy, HIV-1-infected individuals are now living much longer. This increased life expectancy is accompanied by a higher prevalence of HIV-1 associated neurocognitive disorders. Rising too is the incidence in these patients of pathological hallmarks of Alzheimer's disease such as increased deposition of amyloid beta protein (Aβ). Although neurons are major sources of Aβ in the brain, astrocytes are the most numerous glial cells, therefore, even a small level of astrocytic Aβ metabolism could make a significant contribution to brain pathology. Neprilysin (NEP) is a decisive/crucial regulator of Aβ levels. We evaluated the effects of HIV-1 on Aβ deposition and the expression and activity of NEP in primary human astrocytes. Specifically, no differences in intracellular amyloid deposits were found between infected and control cells. However, primary cultures of infected astrocytes showed more extracellular Aβ levels compared to controls. This was accompanied by reduced expression of NEP and to a significant decrease in its activity. These results indicate that the presence of HIV-1 in the brain could contribute to the increase in the total burden of cerebral Aβ.