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171.
I. Lavorel 《Photosynthesis research》1986,9(1-2):273-283
The purpose of this note is to illustrate the feasibility of simulating kinetic systems, such as commonly encountered in photosynthesis research, using the Monte Carlo (MC) method. In this approach, chemical events are considered at the molecular level where they occur randomly and the macroscopic kinetic evolution results from averaging a large number of such events. Their repeated simulation is easily accomplished using digital computing. It is shown that the MC approach is well suited to the capabilities and resources of modern microcomputers. A software package is briefly described and discussed, allowing a simple programming of any kinetic model system and its resolution. The execution is reasonably fast and accurate; it is not subject to such instabilities as found with the conventional analytical approach.Abbreviations MC
Monte Carlo
- RN
random number
- PSU
photosynthetic unit
Dedicated to Prof. L.N.M. Duysens on the occasion of his retirement. 相似文献
172.
Subhash Padhye Takeshi Kambara David N. Hendrickson Govindjee 《Photosynthesis research》1986,9(1-2):103-112
The recent model of Kambara and Govindjee for water oxidation [Kambara T. and Govindjee (1985) Proc. Natl. Acad. Sci. U.S.A., 82:6119–6123] has been extended in this paper by examining all the data in order to identify the most likely candidate for the redox-active ligand (RAL), suggested to operate between the water oxidizing complex (WOC) and Z, the electron donor to the reaction center P680. We have concluded that a very suitable candidate for RAL is the imidazole moiety of a histidine residue. The electrochemical data available on imidazole derivatives play heavily in this identification of RAL. Thus, we suggest that histidine might play the role of an electron mediator between the WOC and Z. A model of S-states in terms of their plausible chemical identity is presented here.Abbreviations J
electronic spin of ion
- P680
reaction center chlorophyll
- RAL
Redox active ligand
- Sn
state of the oxygen-evolving system
- WOC
water oxidation complex
- Z
electron donor to P680
Dedicated to Prof. L.N.M. Duysens on the occasion of his retirement 相似文献
173.
Jacques Hille Frank Verheggen Peter Roelvink Henk Franssen Ab van Kammen Pim Zabel 《Plant molecular biology》1986,7(3):171-176
Summary Plant cells are sensitive to the antibiotic bleomycin, a DNA damaging glycopeptide. A bleomycin resistance determinant, located on transposon Tn5 and functional in bacteria, has been cloned in a plant expression vector and introduced into Nicotiana plumbaginifolia using Agrobacterium tumefaciens. The expression of this determinant in plant cells confers resistance to bleomycin and allows selection of transformed plant cells. 相似文献
174.
Dr. Hans-Joachim Gabius Katalin Vehmeyer Reinhild Engelhardt Gerd A. Nagel Friedrich Cramer 《Cell and tissue research》1986,246(3):515-521
Summary A tumor model system of clones of myeloproliferative sarcoma virus (MPV)-transformed rat fibroblasts (NRK) with different growth properties and metastatic potential was studied. The relationship between metastatic behavior and composition of carbohydrate-binding proteins (lectins) was analyzed by affinity chromatography. The metastatic variant differs qualitatively from its parental clone in the presence of galactoside-binding proteins at apparent molecular weights of 80 kDa, 70 kDa, 22 kDa, 18 kDa and 16 kDa and of a fucose-binding protein at apparent molecular weight of 42 kDa. The -glucosyl-binding proteins at apparent molecular weights of 67 kDa and 53 kDa and a galactoside-binding protein of apparent molecular weight of 34 kDa, however, are not detectable in the metastatic variant in comparison to its parental clone. In this respect the parental clone shows closer resemblance to the clone 5–8#1 with different growth properties and low metastatic potential than to its own metastatic variant. Furthermore, only the parental clone has a melibiose- and a mannan-binding protein of an apparent molecular weight of 64 kDa and 14 kDa, respectively. Rosette formation as model system for intercellular interaction reveals differences in the inhibition pattern with sugar between the two clones 5–8#1 and 5–20#20, whereas the metastatic variant 5–20#20 (s) exhibits drastically reduced capability to form rosettes. Initial experiments demonstrate the feasibility of drug targeting to transformed fibroblasts via carbohydrate-binding proteins. 相似文献
175.
176.
The versatility of proteolytic enzymes 总被引:7,自引:0,他引:7
H Neurath 《Journal of cellular biochemistry》1986,32(1):35-49
The growing realization of their physiological importance has generated renewed interest in the study of proteolytic enzymes. Modern methods of protein chemistry and molecular biology have revealed new insights into the protein and gene structure of a variety of protein precursors and their processing by limited proteolysis. Examples are given in this review for transmembrane processes and the role of signal peptidases of both eukaryotic and prokaryotic origin, the processing of prohormones and precursors of growth factors, protein components of blood coagulation, fibrinolysis, and of the complement system, and a group of granulocyte proteases, including the mast cell serine proteases. The relationship of homologous domains found in many of these proteases and their zymogens to protein evolution is a recurrent theme of this discussion. 相似文献
177.
Cycling of soil carbon in the first year after a clear-felling was compared with that before the felling in a Japanese red
pine forest in Hiroshima Prefecture, west Japan. The daily mean temperature at the soil surface in summer was increased after
the felling in comparison to that before felling, and the water content of both the A0 layer and the surface mineral soil was decreased due to the loss of the forest canopy. The rate of weight loss of the A0 layer was reduced after felling. However, accumulation of the A0 layer rapidly decreased because of the lack of litter supply to the forest floor. Low soil respiration after felling was
mainly caused by the cessation of root respiration. Analysis of annual soil carbon cycling was then conducted using a compartment
model. The relative decomposition rate of the A0 layer decreased whereas that of humus and dead roots in mineral soil increased to some extent after felling. The accumulation
of carbon in mineral soil, however, increased slightly due to the supply of humus from roots killed by the felling. 相似文献
178.
On the basis of an artificial defoliation experiment, a new growth model of soybean was formulated through a modification
of Rudd's (1980) model with regard to his equations for dry matter allocation. Compensatory growth for leaf damage was modelled
by a single process in which the dry matter allocation changes dynamically according to the severity of leaf damage. The sums
of squared differences between simulations and experimental soybean yields were much smaller in our modified model than in
Rudd's original model. The modified model gave a better simulation of yield loss due to defoliation that varied in time and
intensity. The relationship between various times and intensities of defoliation and yield loss was shown, which is essential
for establishing the dynamic economic injury level in IPM. 相似文献
179.
Summary Polyps of mature colonies of Hydractinia echinata obey the rule of distal transformation by regenerating heads but not stolons. However, this rule is not valid for young polyps as these regenerate stolons from proximal cut ends. Also, small cell aggregates and even small fragments excised from full-grown polyps are capable of stolon formation. Aggregates produced from dissociated cells undergo either distal or proximal transformation depending on their size, speed of head regeneration in the donor used for dissociation and the positional derivation of the cells. The latent capability of stolon formation is released under conditions that cause loss of morphogens and depletion of their sources. However, internal regulative processes can also lead to gradual proximal transformation: regenerating segments of polyps sometimes form heads at both ends and the distal pattern is duplicated. Subsequently, all sets of proximal structures, including stolons, are intercalated. In contrast to distal transformation, proximal transformation is a process the velocity of which declines with the age and size of the cell community. 相似文献
180.
To obtain a satisfactory agreement between computed transition temperatures and those determined experimentally, we introduce explicitly water molecules which hydrate the polar headgroup of dipalmitoylphosphatidylethanolamine molecules. The calculated free energy curves as a function of the intermolecular interchain distance and the degree of hydration of the polar groups permit the determination of the transition of the phospholipid system from the gel to the liquid crystalline phase. The detailed structure of the hydration shell is defined using the supermolecular approach. 相似文献