内蒙古高原针茅草原群落土壤水分和碳、氮分布的小尺度空间异质性

用地统计学的方法,研究比较了内蒙古高原4类地带性针茅草原群落,贝加尔针茅（Stipa baicalensis)群落,大针茅（S.grandis)群落,克氏针茅（S.krylovii)群落和小针茅（S.kelemenzii)群落0-20cm土壤水分和碳,氮的小尺度空间异质性特征,结果表明;4类群落土壤水分,有机碳和全氮均表现出显著的小尺度空间结构特征。自相关尺度为1.91m-10.81m,结构性方差占样本方差的35.31%-99.74%。从贝加尔针茅群落到小针茅群落空间自相关的尺度逐渐增大,纹理有逐渐变粗的趋势,土壤水分,碳和氮的小尺度空间格局共同作用于群落的生态学过程,即土壤水分格局→植物种群格局（基本斑块的大小）→土壤碳空间格局→土壤氮空间格局,同时,由于生态学过程的反馈作用,土壤氮空间格局→种群格局→土壤水分格局,土壤属性空间自相关尺度的改变可能是导致群落演替的驱动力,草原退化可能与土壤异质性尺度的改变相关。     

Soft interactions and volume exclusion by polymeric crowders can stabilize or destabilize transient structure in disordered proteins depending on polymer concentration

The effects of macromolecular crowding on the transient structure of intrinsically disordered proteins is not well‐understood. Crowding by biological molecules inside cells could modulate transient structure and alter IDP function. Volume exclusion theory and observations of structured proteins suggest that IDP transient structure would be stabilized by macromolecular crowding. Amide hydrogen exchange (HX) of IDPs in highly concentrated polymer solutions would provide valuable insights into IDP transient structure under crowded conditions. Here, we have used mass spectrometry to measure HX by a transiently helical random coil domain of the activator of thyroid and retinoid receptor (ACTR) in solutions containing 300 g L^?1 and 400 g L^?1 of Ficoll, a synthetic polysaccharide, using a recently‐developed strong cation exchange‐based cleanup method [Rusinga, et al., Anal Chem 2017;89:1275–1282]. Transiently helical regions of ACTR exchanged faster in 300 g L^?1 Ficoll than in dilute buffer. In contrast, one transient helix exchanged more slowly in 400 g L^?1 Ficoll. Nonspecific interactions destabilize ACTR helicity in 300 g L^?1 Ficoll because ACTR engages with the Ficoll polymer mesh. In contrast, 400 g L^?1 Ficoll is a semi‐dilute solution where ACTR cannot engage the Ficoll mesh. At this higher concentration, volume exclusion stabilizes ACTR helicity because ACTR is compacted in interstitial spaces between Ficoll molecules. Our results suggest that the interplay between nonspecific interactions and volume exclusion in different cellular compartments could modulate IDP function by altering the stability of IDP transient structures. Proteins 2017; 85:1468–1479. © 2017 Wiley Periodicals, Inc.     

Semi‐synthesis of murine prion protein by native chemical ligation and chemical activation for preparation of polypeptide‐α‐thioester

Prions are suspected as pathogen of the fatal transmissible spongiform encephalopathies. Strategies to access homogenous prion protein (PrP) are required to fully comprehend the molecular mechanism of prion diseases. However, the polypeptide fragments from PrP show a high tendency to form aggregates, which is a gigantic obstacle of protein synthesis and purification. In this study, murine prion sequence 90 to 230 that is the core three‐dimensional structure domain was constructed from three segments murine PrP (mPrP)(90–177), mPrP(178–212), and mPrP(213–230) by combining protein expression, chemical synthesis and chemical ligation. The protein sequence 90 to 177 was obtained from expression and finally converted into the polypeptide hydrazide by chemical activation of a cysteine in the tail. The other two polypeptide fragments of the C‐terminal were obtained by chemical synthesis, which utilized the strategies of isopeptide and pseudoproline building blocks to complete the synthesis of such difficult sequences. The three segments were finally assembled by sequentially using native chemical ligation. This strategy will allow more straightforward access to homogeneously modified PrP variants. Copyright © 2017 European Peptide Society and John Wiley & Sons, Ltd.     

Biotic degradation at night,abiotic degradation at day: positive feedbacks on litter decomposition in drylands

The arid and semi‐arid drylands of the world are increasingly recognized for their role in the terrestrial net carbon dioxide (CO₂) uptake, which depends largely on plant litter decomposition and the subsequent release of CO₂ back to the atmosphere. Observed decomposition rates in drylands are higher than predictions by biogeochemical models, which are traditionally based on microbial (biotic) degradation enabled by precipitation as the main mechanism of litter decomposition. Consequently, recent research in drylands has focused on abiotic mechanisms, mainly photochemical and thermal degradation, but they only partly explain litter decomposition under dry conditions, suggesting the operation of an additional mechanism. Here we show that in the absence of precipitation, absorption of dew and water vapor by litter in the field enables microbial degradation at night. By experimentally manipulating solar irradiance and nighttime air humidity, we estimated that most of the litter CO₂ efflux and decay occurring in the dry season was due to nighttime microbial degradation, with considerable additional contributions from photochemical and thermal degradation during the daytime. In a complementary study, at three sites across the Mediterranean Basin, litter CO₂ efflux was largely explained by litter moisture driving microbial degradation and ultraviolet radiation driving photodegradation. We further observed mutual enhancement of microbial activity and photodegradation at a daily scale. Identifying the interplay of decay mechanisms enhances our understanding of carbon turnover in drylands, which should improve the predictions of the long‐term trend of global carbon sequestration.     

A field trial to test effects of watering,seed addition and disturbance on perennial species recruitment in Belah woodland

Failure of perennial species to regenerate is a significant threat to semi‐arid woodlands across south‐eastern Australia. High grazing pressure eliminates the recruitment of many perennial species in semi‐arid woodlands, but little is known about requirements for regeneration under low grazing pressure. We tested the effects of addition of water (irrigation to match the largest rainfall events of the last century), seed, soil disturbance and fire within a grazing exclosure in Belah (Casuarina pauper) woodland in the Murray‐Sunset National Park, Victoria. Recruitment was observed in 13 perennial species and was dominated by chenopods. Addition of water, seed and soil disturbance increased abundance of juvenile perennial species above the low‐level background recruitment that occurred in the prevailing drought conditions. This supports the view that continuous recruitment occurs for many semi‐arid perennials. Low seed availability and an inability to maintain soil moisture conditions matching that of regeneration events are likely factors in the lack of recruitment for tree species and limited response of shrubs in this experiment.     

Gene Expression Profile Changes in Germinating Rice

Water absorption is a prerequisite for seed germination. During imbibition, water influx causes the resumption of many physiological and metabolic processes in growing seed. In order to obtain more complete knowledge about the mechanism of seed germination, two‐dimensional gel electrophoresis was applied to investigate the protein profile changes of rice seed during the first 48 h of imbibition. Thirty‐nine differentially expressed proteins were identified, including 19 down‐regulated and 20 up‐regulated proteins. Storage proteins and some seed development‐ and desiccation‐associated proteins were down regulated. The changed patterns of these proteins indicated extensive mobilization of seed reserves. By contrast, catabolism‐associated proteins were up regulated upon imbibition. Semi‐quantitative real time polymerase chain reaction analysis showed that most of the genes encoding the down‐ or up‐regulated proteins were also down or up regulated at mRNA level. The expression of these genes was largely consistent at mRNA and protein levels. In providing additional information concerning gene regulation in early plant life, this study will facilitate understanding of the molecular mechanisms of seed germination.     

小麦TCTP基因的克隆及白粉菌诱导下的表达

翻译控制肿瘤蛋白(translationally controlled tumor protein,TCTP)最初在鼠肿瘤细胞中被发现,研究表明TCTP广泛存在于动植物细胞中,并具有多种生物学功能。本研究用RT PCR和RACE技术在抗白粉病栽培小麦Brock中克隆了一个TCTP基因,该基因全长766 bp,推测编码一个168个氨基酸的多肽。ScanProsite分析表明,该多肽链具有2个TCTP特征结构区（TCTP1和TCTP2）和7个可能的功能位点。表达半定量分析发现,该基因受华北地区流行的优势小种15号白粉菌诱导,且随着诱导时间的增加其表达量增加。本研究将可能在小麦白粉病抗性研究领域开辟新的研究思路。     

Swarming and mating activity of Anopheles gambiae mosquitoes in semi‐field enclosures

Anopheles gambiae Giles sensu stricto (Diptera: Culicidae) is the major Afro‐tropical vector of malaria. Novel strategies proposed for the elimination and eradication of this mosquito vector are based on the use of genetic approaches, such as the sterile insect technique (SIT). These approaches rely on the ability of released males to mate with wild females, and depend on the application of effective protocols to assess the swarming and mating behaviours of laboratory‐reared insects prior to their release. The present study evaluated whether large semi‐field enclosures can be utilized to study the ability of males from a laboratory colony to respond to natural environmental stimuli and initiate normal mating behaviour. Laboratory‐reared males exhibited spatiotemporally consistent swarming behaviour within the study enclosures. Swarm initiation, peak and termination time closely tracked sunset. Comparable insemination rates were observed in females captured in copula in the semi‐field cages relative to females in small laboratory cages. Oviposition rates after blood feeding were also similar to those observed in laboratory settings. The data suggest that outdoor enclosures are suitable for studying swarming and mating in laboratory‐bred males in field‐like settings, providing an important reference for future studies aimed at assessing the comparative mating ability of strains for SIT and other vector control strategies.