Effect of fire on the topsoil seed banks of rehabilitated bauxite mine sites in the jarrah forest of Western Australia

Summary Germinable seed stores of 5- and 8-year-old rehabilitated bauxite mine pits in south-west Western Australia were assessed before and after burning. These seed stores were compared to those of adjacent unmined Jarrah ( Eucalyptus marginata ) forest, to identify at what age fire can be reintroduced, in order to measure restoration success and reduce fire hazard. Soils were sampled in early summer (before fire) and late autumn (after fire). Before fire, the mean topsoil seed bank of 5-year-old sites was 2121 seeds per m² while 8-year-old sites had a mean of 1520 seeds per m². Only the 5-year-old sites were significantly different from the forest mean of 1478 seeds per m² for the same season. After summer burns (and possibly due to seasonal effects) topsoil seed banks of rehabilitated areas (sampled in autumn) decreased by an average of 53 per cent. Topsoil seed banks of 5–8-year-old sites were resistant to lower intensity burns, with 362 seeds per m² of native species surviving mild burns and 108 seeds per m² of native species surviving after an intense summer fire. The topsoil seed reserve of 5–8-year-old rehabilitated areas had a high proportion of annual weed species while the forest sites had high levels of subshrubs and native annuals. Low-intensity burns did not alter the composition of life-forms in the soil seed bank, while intense burns favoured annual weed and shrub species. The results indicate that it is not appropriate to introduce fire to rehabilitated areas before 8 years, due to limited fuel reduction benefits and possible adverse effects on obligate seeding species. The large proportion of weed species in the soil seed bank of young rehabilitated areas is a concern, and remains a major consideration for future disturbance of these areas.     

黄土高原子午岭油松林的种子雨和土壤种子库动态

对黄土高原区子午岭不同林龄(18a、29a、40a、54a)油松(Pinus tabulaeformis carr.)人工林及天然林(约75a)的种子雨和土壤种子库进行了研究.结果表明,该区油松种子雨一般从每年9月初开始,一直到11月底结束,种子雨降落历程与林龄大小有关,种子雨发生时间和降落高峰期有所不同.不同林龄的油松种子雨强度不同,种子雨总量大小顺序为:40a人工林((489 9±8.64)粒· m-2)＞29a人工林((346.8±7.45)粒· m-2)＞54a人工林((327.1±8.13)粒· m-2)＞天然林((146.9±5.25)粒· m-2)＞18a人工林((78.1±2.72)粒· m-2).种子雨总量随林龄的增加而增加,约40a时达到高峰,种子雨活力也以40a时最高.不同林龄油松林土壤种子库存在显著差异,其中18a人工林种子库最小,40a人工林种子库最大.从种子雨降落到次年4月,5种林分土壤种子库总量下降了42.34%～53.59%,空粒种子增加了26.72%～48.69%;从4月到8月份种子腐烂率由10.28%～13 62%增加到57.25%～63.28%.动物的搬运、取食和种子腐烂死亡是种子库损耗的主要因素.土壤种子库中的油松种子主要集中在枯枝落叶层,其次为0～2cm层,2～10cm层种子最少.到8月中旬,土壤中98.26%的油松种子都已丧失活性.不同林分下油松幼苗的密度差异较大,40a人工林下幼苗最多,其余依次为29a人工林、54a人工林和天然林,18a人工林下的实生苗极少,幼苗死亡率极高.在一定龄级范围内,人工林结实能力和更新潜力随林龄增加而增加,40a时更新潜力最大.虽然有大量种子下落,但由于种子大量损耗和幼苗死亡,通过环境筛作用而最终可以成熟的个体数量十分有限.     

Solution structure of the c-terminal dimerization domain of SARS coronavirus nucleocapsid protein solved by the SAIL-NMR method

The C-terminal domain (CTD) of the severe acute respiratory syndrome coronavirus (SARS-CoV) nucleocapsid protein (NP) contains a potential RNA-binding region in its N-terminal portion and also serves as a dimerization domain by forming a homodimer with a molecular mass of 28 kDa. So far, the structure determination of the SARS-CoV NP CTD in solution has been impeded by the poor quality of NMR spectra, especially for aromatic resonances. We have recently developed the stereo-array isotope labeling (SAIL) method to overcome the size problem of NMR structure determination by utilizing a protein exclusively composed of stereo- and regio-specifically isotope-labeled amino acids. Here, we employed the SAIL method to determine the high-quality solution structure of the SARS-CoV NP CTD by NMR. The SAIL protein yielded less crowded and better resolved spectra than uniform ¹³C and ¹⁵N labeling, and enabled the homodimeric solution structure of this protein to be determined. The NMR structure is almost identical with the previously solved crystal structure, except for a disordered putative RNA-binding domain at the N-terminus. Studies of the chemical shift perturbations caused by the binding of single-stranded DNA and mutational analyses have identified the disordered region at the N-termini as the prime site for nucleic acid binding. In addition, residues in the β-sheet region also showed significant perturbations. Mapping of the locations of these residues onto the helical model observed in the crystal revealed that these two regions are parts of the interior lining of the positively charged helical groove, supporting the hypothesis that the helical oligomer may form in solution.     

Competing phytoplankton undermines allelopathy of a bloom-forming dinoflagellate

Biotic interactions in the plankton can be both complex and dynamic. Competition among phytoplankton is often chemically mediated, but no studies have considered whether allelopathic compounds are modified by biotic interactions. Here, we show that compounds exuded during Karenia brevis blooms were allelopathic to the cosmopolitan diatom Skeletonema costatum, but that bloom allelopathy varied dramatically among collections and years. We investigated several possible causes of this variability and found that neither bloom density nor concentrations of water-borne brevetoxins correlated with allelopathic potency. However, when we directly tested whether the presence of competing phytoplankton influenced bloom allelopathy, we found that S. costatum reduced the growth-inhibiting effects of bloom exudates, suggesting that S. costatum has a mechanism for undermining K. brevis allelopathy. Additional laboratory experiments indicated that inducible changes to K. brevis allelopathy were restricted to two diatoms among five sensitive phytoplankton species, whereas five other species were constitutively resistant to K. brevis allelopathy. Our results suggest that competitors differ in their responses to phytoplankton allelopathy, with S. costatum exhibiting a previously undescribed method of resistance that may influence community structure and alter bloom dynamics.     

塔里木河下游不同退化区地表植被和土壤种子库特征

对塔里木河下游不同退化程度的4个典型断面进行了植被和土壤种子库的取样调查,采用种子萌发试验研究了不同退化区植被和土壤种子库的特征,结果表明:(1)塔里木河下游地表植被表现为严重的逆行演替,具体体现为胡杨林都为过熟林,几乎没有胸径在10cm以下的幼林;植被盖度、密度和多样性指数均维持在一个较低的水平上;随退化程度不断加重,地表植被中草本植物的相对密度、相对盖度和相对频度逐渐降低,而灌木和乔木的相对密度、相对盖度和相对频度逐渐增加;(2)研究区土壤种子库的基本特征是:土壤种子库种类贫乏、密度低、多样性指数和相似性系数不高;(3) 随退化程度的加重,土壤种子库物种数不断减少、密度明显下降、优势种组成趋于单一、表层种子库比例升高、1年生草本植物占优势逐渐向多年生草本植物和灌木植物转变及土壤种子库物种组成与地上植被物种组成上差异显著.     

Analysis of essential histidine residues of maize branching enzymes by chemical modification and site-directed mutagenesis

Incubation of maize branching enzyme, mBEI and mBEII, with 100 μM diethylpyrocarbonate (DEPC) rapidly inactivated the enzymes. Treatment of the DEPC-inactivated enzymes with 100–500 mM hydroxylamine restored the enzyme activities. Spectroscopic data indicated that the inactivation of BE with DEPC was the result of histidine modification. The addition of the substrate amylose or amylopectin retarded the enzyme inactivation by DEPC, suggesting that the histidine residues are important for substrate binding. In maize BEII, conserved histidine residues are in catalytic regions 1 (His320) and 4 (His508). His320 and His508 were individually replaced by Ala via site-directed mutagenesis to probe their role in catalysis. Expression of these mutants inE. coli showed a significant decrease of the activity and the mutant enzymes hadK _m values 10 times higher than the wild type. Therefore, residues His320 and His508 do play an important role in substrate binding.     

绞股蓝种子休眠机理及其破除方法研究

以采自广西金秀县的绞股蓝种子为研究材料,对其休眠原因、休眠类型及其破眠方法进行了研究,为绞股蓝种子繁殖提供理论依据和技术支持。结果表明:(1)绞股蓝新采收成熟种子的生活力达91%,在10℃~35℃恒温和15℃/25℃变温中的发芽率均低于10%,新种子的生活力极显著大于发芽率,具有显著的休眠现象。(2)绞股蓝种皮不限制吸水,胚分化发育完全,离体胚发芽率为(78.0±4.8)%,且能够长成正常幼苗,说明绞股蓝种子的胚在离体条件下无休眠现象。(3)绞股蓝完整种子及其粉碎种子的水提液对白菜种子的萌发率、苗高及根长均有抑制作用,随水提液浓度增加抑制作用均显著增强,且粉碎种子的抑制作用较强;当粉碎种子的水提液浓度为5%时白菜种子萌发率、苗高、根长分别为18.0%、0.1cm、0.1cm,分别显著低于对照77.1%、97.3%、95.8%,说明绞股蓝种子的种皮和胚乳中存在水溶性萌发抑制物质,是绞股蓝种子休眠的主要原因。(4)GA3和6-BA不能促进绞股蓝种子萌发,低温层积对绞股蓝种子休眠的解除具有促进作用;绞股蓝种子的休眠属于生理休眠类型,休眠水平属于中间型。(5)低温干藏能够打破绞股蓝种子休眠,是绞股蓝种子破除休眠及种子保存较为理想的方式。