Tuberculosis vaccines: beyond bacille Calmette-Guerin

Tuberculosis (TB) disease caused by Mycobacterium tuberculosis (M. tb) remains one of the leading infectious causes of death and disease throughout the world. The only licensed vaccine, Mycobacterium bovis bacille Calmette-Guérin (BCG) confers highly variable protection against pulmonary disease. An effective vaccination regimen would be the most efficient way to control the epidemic. However, BCG does confer consistent and reliable protection against disseminated disease in childhood, and most TB vaccine strategies being developed incorporate BCG to retain this protection. Cellular immunity is necessary for protection against TB and all the new vaccines in development are focused on inducing a strong and durable cellular immune response. There are two main strategies being pursued in TB vaccine development. The first is to replace BCG with an improved whole organism mycobacterial priming vaccine, which is either a recombinant BCG or an attenuated strain of M. tb. The second is to develop a subunit boosting vaccine, which is designed to be administered after BCG vaccination, and to enhance the protective efficacy of BCG. This article reviews the leading candidate vaccines in development and considers the current challenges in the field with regard to efficacy testing.     

On whose shoulders we stand - the pioneering entomological discoveries of Károly Sajó

The excellence of Károly Sajó as a researcher into Hungary’s natural history has been undeservedly neglected. Yet he did lasting work, especially in entomology, and a number of his discoveries and initiatives were before their time.Born in 1851 in Győr, he received his secondary education there and went to Pest University. He taught in a grammar school in 1877–88 before spending seven years as an entomologist at the National Phylloxera Experimental Station, later the Royal Hungarian State Entomological Station. Pensioned off at his own request in 1895, he moved to Őrszentmiklós, where he continued making entomological observations on his own farm and wrote the bulk of his published materials: almost 500 longer or shorter notes, articles and books, mainly on entomological subjects.Sajó was among the first in the world to publish in 1896 a study of how the weather affects living organisms, entitled Living Barometers. His Sleep in Insects, which appeared in the same year, described his discovery, from 1895 observations of the red turnip beetle, Entomoscelis adonidis (Pallas, 1771), of aestivation in insects – in present-day terms diapause.It was a great loss to universal entomology when Sajó ceased publishing about 25 years before his death. His unpublished notes, with his library and correspondence, were destroyed in the World War II. His surviving insect collection is now kept in the Hungarian Natural History Museum, Budapest.     

Threats to and conservation of North African wetlands: the case of the Ramsar site of Beni-Belaid (NE Algeria)

Because of their biogeographical and geomorphological context, the northeastern Algeria wetlands present high species and community richness. The vegetation study of the Ramsar site of Beni-Belaid (Kabylia) showed the existence of four main communities, distributed along gradients of hydrology and disturbance. The obtained results reveal worrying threats on short term: overgrazing results in the lake invasion by the sand eroded from the coastal dune; agriculture induces illegal cutting, water pollution and excessive groundwater pumping; finally, hunting and fishing are illegally practiced into the Ramsar site. The awareness of public authorities is needed in order: (1) to completely protect the wetland with the aim of restoring a riparian forest belt; and (2) to initiate a campaign for increasing the local population awareness, and its involvement in conservation programs.     

Development of a strain-specific quantitative method for monitoring Pseudomonas fluorescens EPS62e, a novel biocontrol agent of fire blight

Pseudomonas fluorescens EPS62e has been selected in a screening procedure for its high efficacy controlling Erwinia amylovora infections in flowers, immature fruits and young pear plants. We developed two monitoring methods which allowed specific detection and quantification of EPS62e by combining classical microbiological techniques with molecular tools. RAPD and unspecific-PCR fingerprints were used to differentiate EPS62e from other P. fluorescens strains. Differential amplified fragments from EPS62e were sequence characterized as SCAR markers and two primer pairs were designed and selected for their specificity against EPS62e. A SCAR primer pair was evaluated and validated for the assessment of population dynamics of EPS62e on pear plants under greenhouse conditions using plating and most probable number assays coupled to PCR. Both techniques were useful in monitoring the biological control agent. The population level of EPS62e after treatment was 7 log CFU(gf.w.)(-1), which in turn decreased progressively to 4-5 log CFU(gf.w.)(-1) after 17 days and then remained stable until the end of the assay 11 days later. The limit of detection of both monitoring methods developed was around 3 log CFU(gf.w.)(-1), thus, providing a reliable tool for the analysis of EPS62e in greenhouse or field trials, and the assessment of threshold population levels for efficient biocontrol of fire blight.     

HLA class II alleles and measles virus-specific cytokine immune response following two doses of measles vaccine

Measles virus-specific T cells and the production of cytokines play a critical role in the immune response following measles immunization. To understand the genetic factors that influence variation in IFN- and IL-4 responses following measles immunization and to provide insight into the factors influencing both cellular and humoral immunity to measles, we assessed associations between human leukocyte antigen (HLA) class II genes and measles-specific Th1 and Th2-type cytokine responses in peripheral blood lymphocytes from 339 children previously vaccinated with two doses of measles-mumps-rubella vaccine (MMR-II). Median values for measles-specific IFN- and IL-4 secretion levels were 40.73 and 9.71 pg/ml, respectively. The global tests suggested associations between measles-specific IFN- response and alleles of the DRB1 and DQB1 loci (P=0.07 and P=0.02, respectively). Specifically, DRB1*0301, *0901, and *1501 alleles were significantly associated with IFN- secretion. The alleles that suggested evidence of an HLA association with IL-4 secretion were DRB1*0103, *0701, and *1101. Th1 cytokine responses and DQB1 allele associations revealed that the alleles with the strongest association with IFN- secretion were DQB1*0201, *0303, *0402, and *0602. Specific alleles with a suggestive association with low measles-specific Th2 cytokine responses were DQB1*0202 and *0503. In addition, DPB1*0101, *0201, and *0601 alleles provided suggestive evidence of an HLA association with measles-induced IFN- response, while DPB1*0501 was associated with an IL-4 response. These data suggest that IFN- and IL-4 cytokine responses to measles may be genetically restricted in part by HLA class II genes, which in turn can restrict the cellular immune response to measles vaccine.     

Genetic estimates of contemporary effective population size: to what time periods do the estimates apply?

Although most genetic estimates of contemporary effective population size (Ne) are based on models that assume Ne is constant, in real populations Ne changes (often dramatically) over time, and estimates (Ne) will be influenced by Ne in specific generations. In such cases, it is important to properly match Ne to the appropriate time periods (for example, in computing Ne/N ratios). Here I consider this problem for semelparous species with two life histories (discrete generations and variable age at maturity--the 'salmon' model), for two different sampling plans, and for estimators based on single samples (linkage disequilibrium, heterozygote excess) and two samples (temporal method). Results include the following. Discrete generations: (i) Temporal samples from generations 0 and t estimate the harmonic mean Ne in generations 0 through t - 1 but do not provide information about Ne in generation t; (ii) Single samples provide an estimate of Ne in the parental generation, not the generation sampled; (iii) single-sample and temporal estimates never provide information about Ne in exactly the same generations; (iv) Recent bottlenecks can downwardly bias estimates based on linkage disequilibrium for several generations. Salmon model: (i) A pair of single-cohort (typically juvenile) samples from years 0 and t provide a temporal estimate of the harmonic mean of the effective numbers of breeders in the two parental years (N b(0) and N b(t)), but adult samples are more difficult to interpret because they are influenced by Nb in a number of previous years; (ii) For single-cohort samples, both one-sample and temporal methods provide estimates of Nb in the same years (contrast with results for discrete generation model); (iii) Residual linkage disequilibrium associated with past population size will not affect single-sample estimates of Nb as much as in the discrete generation model because the disequilibrium diffuses among different years of breeders. These results lead to some general conclusions about genetic estimates of Ne in iteroparous species with overlapping generations and identify areas in need of further research.     

Kinetics and mechanism of the aquation of the trinuclear cation, [μ3-oxo-triaqua-hexakis(acetato)tris(iron(III))]in perchloric acid media

The aquation of the title complex cation in aqueous perchloric acid proceeded via two steps, both postulated to be the proton attack on the oxygen atom which binds the acetate ligand to the metal centre, followed by Fe-O bond cleavage. This was followed by rapid decomposition to produce aqueous iron(III) and acetate ions. The first-order rate constants for the first and second steps at 25 °C are: k₁ = (4.16 ± 0.58) × 10⁻² s⁻¹ and k₂ = (2.09 ± 0.42) × 10⁻³ s⁻¹, respectively, and their corresponding activation parameters are . The spontaneous hydrolysis rate constants for the first and second steps were also determined at 25 °C and ionic strength of 1 mol dm⁻³ and they are k₀ = (3.10 ± 0.82) × 10⁻³ s⁻¹ and , respectively. The corresponding activation parameters are .     

Numerical study of size-structured population models: a case of Gambussia affinis

We study, from a numerical point of view, some properties of a model which describes the evolution of a population of Gambussia affinis. Our model includes sufficiently smooth vital functions. First we select, among four numerical methods of second order, the most appropriate in terms of adaptation to the problem. The most efficient method also reveals new properties of the model for long times, such as the tendency to periodicity, obtained with different initial conditions. We also discuss some advantages and deficiencies of the model.     

Underwater acoustic positioning systems as tool for Posidonia oceanica beds survey

The study of the dynamics of Posidonia oceanica beds, and more particularly, the position of their lower limit, are usually carried out by the installation and monitoring of markers set on the sea bottom. Acoustic telemetry could constitute an interesting alternative solution to the marking of the lower limit seagrass beds. In order to test the potentialities of this system, an experiment was conducted in the Natural Marine Reserve of Cerbère-Banyuls (eastern Pyrenees, France). The possibility of very precise mapping offers many potentialities with regards to the work of monitoring networks in the marine environment (species and assemblages of importance), but also in the monitoring of competition dynamics between the species.