Developing approaches for linear mixed modeling in landscape genetics through landscape‐directed dispersal simulations

Dispersal can impact population dynamics and geographic variation, and thus, genetic approaches that can establish which landscape factors influence population connectivity have ecological and evolutionary importance. Mixed models that account for the error structure of pairwise datasets are increasingly used to compare models relating genetic differentiation to pairwise measures of landscape resistance. A model selection framework based on information criteria metrics or explained variance may help disentangle the ecological and landscape factors influencing genetic structure, yet there are currently no consensus for the best protocols. Here, we develop landscape‐directed simulations and test a series of replicates that emulate independent empirical datasets of two species with different life history characteristics (greater sage‐grouse; eastern foxsnake). We determined that in our simulated scenarios, AIC and BIC were the best model selection indices and that marginal R² values were biased toward more complex models. The model coefficients for landscape variables generally reflected the underlying dispersal model with confidence intervals that did not overlap with zero across the entire model set. When we controlled for geographic distance, variables not in the underlying dispersal models (i.e., nontrue) typically overlapped zero. Our study helps establish methods for using linear mixed models to identify the features underlying patterns of dispersal across a variety of landscapes.     

Can Black‐and‐White Ruffed Lemurs (Varecia variegata) Solve Object Permanence Tasks?

We examined object permanence in black‐and‐white‐ruffed lemurs (Varecia variegata) at Zoo Atlanta. A series of visible and invisible displacement tasks with suitable controls were presented to five adult subjects. Subjects performed significantly above chance on all regular tasks, except for the double invisible displacements. Subjects failed visible and invisible controls. Failure on the control trials did not appear to be because subjects used the “last box touched” strategy (subjects did not choose the last box touched significantly more than expected by chance). However, a substantial percentage of choices was made to the last box touched by the experimenter. There was no significant difference between this percentage, and the percentage of choices made to the baited box (on both visible and invisible controls), which indicates that subjects were drawn to both boxes which the experimenter visited/touched, and thus failed the controls. Based on the results from the present study, we believe that there is no evidence that black‐and‐white ruffed lemurs understand visible and invisible tasks in the traditional object permanence battery. Am. J. Primatol. 75:376‐386, 2013. © 2013 Wiley Periodicals, Inc.     

Restoring Forbs for Sage Grouse Habitat: Fire, Microsites, and Establishment Methods

Abstract The decline and range reduction of sage grouse populations are primarily due to permanent loss and degradation of sagebrush–grassland habitat. Several studies have shown that sage grouse productivity may be limited by the availability of certain preferred highly nutritious forb species that have also declined within sagebrush ecosystems of the Intermountain West, U.S.A. The purpose of this study was to determine the suitability of three species of forbs for revegetation projects where improving sage grouse habitat is a goal. Species suitability was determined by evaluating the emergence, survival, and reproduction of Crepis modocensis, C. occidentalis, and Astragalus purshii in response to method of establishment (seeding or transplanting), site preparation treatment (burned or unburned), and microsite (mound or interspace) in an Artemisia tridentata ssp. wyomingensis vegetation association in south central Oregon. For seeded plants A. purshii had the lowest emergence (8%) of all three species. Both seeded Crepis species had similar overall emergence (38%). Significantly more Crepis seedlings emerged from shrub mounds in unburned areas (50%) than in any other fire‐by‐microsite treatment (33 to 36%). Approximately 10% more Crepis seedlings survived in mounds compared with interspaces. Nearly twice as many emerging Crepis seedlings survived in the burned areas as opposed to unburned areas (p < 0.01). This resulted in more plant establishment in burned mounds despite higher emergence in unburned mounds. Astragalus purshii seedlings also survived better in burned areas (p = 0.06) but had no differential response to microsite. Fire enhanced survival of both Crepis and A. purshii transplants (p = 0.08 and p = 0.001). We believe additional research is needed to improve A. purshii emergence before it will become an effective plant for restoring sage grouse habitat. Conversely, we conclude that these Crepis species provide a viable revegetation option for improving sage grouse habitat in south central Oregon.     

长白山花尾榛鸡繁殖成功率的研究

１９８６～１９９５年,对长白山花尾榛鸡的繁殖率进行了研究。无线电遥测的结果表明,花尾榛鸡的孵化率为６５５％（ｎ＝５）,繁殖成功率为２０９％（ｎ＝４）,幼鸟成活率３７５％（ｎ＝３）。花尾榛鸡家族群的幼鸟数随日龄增加而减少,幼鸟日龄为０～２５日时死亡率较高,２５日龄后的死亡率显著减少。１０年花尾榛鸡的繁殖成功率指数的变化与６月的降水量及＞１ｍｍ的降水天数呈显著的负相关（Ｐ＜００５,Ｐ＜００２５）,说明育雏初期降水对幼鸟成活率的影响较大。     

花尾榛鸡的非对称性比和成体存活率

1999至2002年,在法国东南部的阿尔卑斯山,通过无线电追踪方法研究了花尾榛鸡的性比问题。首先,我们通过直接观测无线电标记雄性的配对比例,在消除可能的捕捉误差后,发现繁殖种群性比为1．26（即未配对的雄性占21％）。然后,我们估计了标记个体的存活率和繁殖成功率。在假设窝扩散时幼体的性比平衡的前提下,通过两性和两个年龄组（幼体,〈10月龄的个体;成体〉10月龄的个体）的确定性统计模型,得到的理论性比为1．22（即未配对的雄性占18％）,这一结果与实际观测的性比十分接近。我们认为,雌性死亡率高导致的两性存活率差异可以解释雄性性比偏高现象。我们进而讨论了花尾榛鸡整个分布区内居间强度的非对称性比的适应意义,以及在衰退的花尾榛鸡种群中雌性数量极端不足的后果[动物学报52（4）：655—662,2006]。     

Attractive Spring-food for willow grouse (Lagopus lagopus subsp. lagopus L.) studied using plant macrofossils and pollen in faeces: a methodological discussion

While macrofossil remains of herbs and flowers have disintegrated beyond identification, pollen survives the digestive process and can be identified, sometimes to species level, and is hence an important tool in determining and reconstructing animal diets.

This study compares macroscopic plant parts and pollen remains in faeces from grouse. While macroscopic remains reflect the quantity of bark, twigs, berries and leaves in the birds' food, the pollen also reflects other food, such as catkins, flower buds with developed pollen, flowers and pollen attached to leaves.

Both techniques reflect that Betula and Salix are the most important food for grouse in early Spring. Pollen analysis shows that later in Spring, after snow-melt, the birds are attracted to different plants, firstly, it is taxa within the Ericales and their fruits from the previous year. The nutrient value of food in periods with more or less snow cover is based on the environmental conditions of the previous year. Later on, different herbs, including insect-pollinated plants rich in nectar/sugar, are recorded in the pollen but are not reflected in the macro study, and are therefore lost in most calculations and not discussed. Nutrient content calculations based on Spring and Summer flowers need to be compared with the environmental and climate conditions of the current year.     

Effects of livestock grazing on rangeland biodiversity: A meta‐analysis of grouse populations

Livestock grazing affects over 60% of the world's agricultural lands and can influence rangeland ecosystem services and the quantity and quality of wildlife habitat, resulting in changes in biodiversity. Concomitantly, livestock grazing has the potential to be detrimental to some wildlife species while benefiting other rangeland organisms. Many imperiled grouse species require rangeland landscapes that exhibit diverse vegetation structure and composition to complete their life cycle. However, because of declining populations and reduced distributions, grouse are increasingly becoming a worldwide conservation concern. Grouse, as a suite of upland gamebirds, are often considered an umbrella species for other wildlife and thus used as indicators of rangeland health. With a projected increase in demand for livestock products, better information will be required to mitigate the anthropogenic effects of livestock grazing on rangeland biodiversity. To address this need, we completed a data‐driven and systematic review of the peer‐reviewed literature to determine the current knowledge of the effects of livestock grazing on grouse populations (i.e., chick production and population indices) worldwide. Our meta‐analysis revealed an overall negative effect of livestock grazing on grouse populations. Perhaps more importantly, we identified an information void regarding the effects of livestock grazing on the majority of grouse species. Additionally, the reported indirect effects of livestock grazing on grouse species were inconclusive and more reflective of differences in the experimental design of the available studies. Future studies designed to evaluate the direct and indirect effects of livestock grazing on wildlife should document (i) livestock type, (ii) timing and frequency of grazing, (iii) duration, and (iv) stocking rate. Much of this information was lacking in the available published studies we reviewed, but is essential when making comparisons between different livestock grazing management practices and their potential impacts on rangeland biodiversity.     

Testing the interactive effects of testosterone and parasites on carotenoid‐based ornamentation in a wild bird

Abstract Testosterone underlies the expression of most secondary sexual traits, playing a key role in sexual selection. However, high levels might be associated with physiological costs, such as immunosuppression. Immunostimulant carotenoids underpin the expression of many red‐yellow ornaments, but are regulated by testosterone and constrained by parasites. We manipulated testosterone and nematode burdens in red grouse (Lagopus lagopus scoticus) in two populations to tease apart their effects on carotenoid levels, ornament size and colouration in three time‐step periods. We found no evidence for interactive effects of testosterone and parasites on ornament size and colouration. We showed that ornament colouration was testosterone‐driven. However, parasites decreased comb size with a time delay and testosterone increased carotenoid levels in one of the populations. This suggests that environmental context plays a key role in determining how individuals resolve the trade‐off between allocating carotenoids for ornamental coloration or for self‐maintenance needs. Our study advocates that adequately testing the mechanisms behind the production or maintenance of secondary sexual characters has to take into account the dynamics of sexual trait expression and their environmental context.