Greater shrub dominance alters breeding habitat and food resources for migratory songbirds in Alaskan arctic tundra

Climate warming is affecting the Arctic in multiple ways, including via increased dominance of deciduous shrubs. Although many studies have focused on how this vegetation shift is altering nutrient cycling and energy balance, few have explicitly considered effects on tundra fauna, such as the millions of migratory songbirds that breed in northern regions every year. To understand how increasing deciduous shrub dominance may alter breeding songbird habitat, we quantified vegetation and arthropod community characteristics in both graminoid and shrub dominated tundra. We combined measurements of preferred nest site characteristics for Lapland longspurs (Calcarius lapponicus) and Gambel's White‐crowned sparrows (Zonotrichia leucophrys gambelii) with modeled predictions for the distribution of plant community types in the Alaskan arctic foothills region for the year 2050. Lapland longspur nests were found in sedge‐dominated tussock tundra where shrub height does not exceed 20 cm, whereas White‐crowned sparrows nested only under shrubs between 20 cm and 1 m in height, with no preference for shrub species. Shrub canopies had higher canopy‐dwelling arthropod availability (i.e. small flies and spiders) but lower ground‐dwelling arthropod availability (i.e. large spiders and beetles). Since flies are the birds' preferred prey, increasing shrubs may result in a net enhancement in preferred prey availability. Acknowledging the coarse resolution of existing tundra vegetation models, we predict that by 2050 there will be a northward shift in current White‐crowned sparrow habitat range and a 20–60% increase in their preferred habitat extent, while Lapland longspur habitat extent will be equivalently reduced. Our findings can be used to make first approximations of future habitat change for species with similar nesting requirements. However, we contend that as exemplified by this study's findings, existing tundra modeling tools cannot yet simulate the fine‐scale habitat characteristics that are critical to accurately predicting future habitat extent for many wildlife species.     

Beyond illness: Variation in haemosporidian load explains differences in vocal performance in a songbird

In animal communication, signals are expected to evolve to be honest, so that receivers avoid being manipulated by signalers. One way that signals can evolve to be honest is for them to be costly, with only high‐quality individuals being able to bear the costs of signal expression. It has been proposed that parasites can introduce costs that affect the expression of sexually selected traits, and there is evidence to support the role of parasitism in modulating animal behavior. If host infection status or intensity is found to relate to differences in signal expression, it may indicate a fitness cost that mediates honesty of signals. Birdsong is a good model for testing this, and physically challenging songs representing complex motor patterns provide a good example of sexually selected traits indicating individual condition. We performed a field study to evaluate the relationship between song performance and avian malaria infection in a common songbird. Previous work on this subject has almost always evaluated avian malaria in terms of binary infection status; however, parasitemia—infection intensity—is rarely assessed, even though differences in parasite load may have profound physiological consequences. We estimated parasitemia levels by using real‐time PCR. We found that birds with higher parasitemia displayed lower vocal performance, providing evidence that this song trait is an honest signal of parasitic load of haemosporidian parasites. To our knowledge, this study links parasite load and the expression of a sexually selected trait in a way that has not been addressed in the past. Studies using song performance traits and parasitemia offer an important perspective for understanding evolution of characters via sexual selection.     

Breeding experience and population density affect the ability of a songbird to respond to future climate variation

Predicting how populations respond to climate change requires an understanding of whether individuals or cohorts within populations vary in their response to climate variation. We used mixed-effects models on a song sparrow (Melospiza melodia) population in British Columbia, Canada, to examine differences among females and cohorts in their average breeding date and breeding date plasticity in response to the El Niño Southern Oscillation. Climatic variables, age and population density were strong predictors of timing of breeding, but we also found considerable variation among individual females and cohorts. Within cohorts, females differed markedly in their breeding date and cohorts also differed in their average breeding date and breeding date plasticity. The plasticity of a cohort appeared to be due primarily to an interaction between the environmental conditions (climate and density) experienced at different ages rather than innate inter-cohort differences. Cohorts that expressed higher plasticity in breeding date experienced warmer El Niño springs in their second or third breeding season, suggesting that prior experience affects how well individuals responded to abnormal climatic conditions. Cohorts born into lower density populations also expressed higher plasticity in breeding date. Interactions between age, experience and environmental conditions have been reported previously for long-lived taxa. Our current results indicate that similar effects operate in a short-lived, temperate songbird.     

Inbreeding coefficient and heterozygosity–fitness correlations in unhatched and hatched song sparrow nestmates

Heterozygosity–fitness correlations use molecular measures of heterozygosity as proxy estimates of individual inbreeding coefficients (f) to examine relationships between inbreeding and fitness traits. Heterozygosity–fitness correlations partly depend on the assumption that individual heterozygosity and f are strongly and negatively correlated. Although theory predicts that this relationship will be strongest when mean f and variance in f are high, few studies of heterozygosity–fitness correlations include estimates of f based on pedigrees, which allow for more thorough examinations of the relationship between f, heterozygosity and fitness in nature. We examined relationships between pedigree‐based estimates of f, multilocus heterozygosity (MLH) and the probability of survival to hatch in song sparrow nestmates. f and MLH were weakly, but significantly negatively correlated. Inbreeding coefficient predicted the probability of survival to hatch. In contrast, MLH did not predict the probability of survival to hatch nor did it account for residual variation in survival to hatch after statistically controlling for the effects of f. These results are consistent with the expectation that heterozygosity–f correlations will be weak when mean and variance in f are low. Our results also provide empirical support for recent simulation studies, which show that variation in MLH among siblings with equal f can be large and may obscure MLH–fitness relationships.     

Identification of major sources controlling groundwater chemistry from a multilayered aquifer system

Abstract

The Maknassy basin is a typical example of an arid area in Central Tunisia. The geology of the area is mainly composed of Cretaceous calcareous formations. To identify the major process involved in controlling the groundwater chemistry, 53 groundwater samples for three different aquifer levels have been examined. The groundwater chemistry is dominated by SO₄ (Na + Mg) and (Cl + SO₄). The presence of (Ca + Mg) and (Na + K) with HCO₃ indicates the domination of dolomitic rock weathering as the major source of cations. The plots for Na to Cl indicate a fine correlation and reflects their release from halite dissolution during groundwater transition. An ion exchange process is also activated in study area which is indicated by a shift to the right in a plot for Ca + Mg to SO₄ + HCO₃. The plot of Na – Cl to Ca + Mg – (HCO₃ + SO₄) confirms that Ca, Mg and Na concentrations in groundwater are derived from aquifer materials. Saturation indexes of groundwater samples indicate undersaturation for gypsum and anhydrite, and oversaturation for calcite, dolomite and aragonite confirming waterrock interactions by dissolution and dilution processes. In general, water chemistry is guided by weathering process, ion exchange and water-rock interaction during groundwater transition.     

Molecular characterization and transcriptional analysis of non-mammalian type Toll like receptor (TLR21) from rock bream (Oplegnathus fasciatus)

Toll-like receptors (TLRs) are a large family of pattern recognition receptors, which are involved in triggering host immune responses against various pathogens by detecting their evolutionarily conserved pathogen associated molecular patterns (PAMPs). TLR21 is a non-mammalian type TLR, which recognizes unmethylated CpG DNA, and is considered as a functional homolog of mammalian TLR9. In this study, we attempted to identify and characterize a novel TLR21 counterpart from rock bream (Oplegnathus fasciatus) designated as RbTLR21, at molecular level. The complete coding sequence of RbTLR21 was 2919 bp in length, which encodes a polypeptide of 973 amino acids with a predicted molecular mass of 112 kDa and a theoretical isoelectric point of 8.6. The structure of the deduced RbTLR21 protein is similar to that of the members of typical TLR family, and includes the ectodomain, which consists of 16 leucine rich repeats (LRRs), a transmembrane domain, and a cytoplasmic Toll/interleukin-1 receptor (TIR) domain. According to the pairwise sequence analysis data, RbTLR21 was homologous to that of the orange-spotted grouper (Epinephelus coioides) with 76.9% amino acid identity. Furthermore, our phylogenetic analysis revealed that RbTLR21 is closely related to E. coioides TLR21. The RbTLR21 was ubiquitously expressed in all the tissues tested, but the highest expression was found in spleen. Additionally, upon stimulation with Streptococcus iniae, rock bream iridovirus (RBIV), and Edwardsiella tarda, RbTLR21 mRNA was significantly up-regulated in spleen tissues. Collectively, our findings suggest that RbTLR21 is indeed an ortholog of the TLR21 family and may be important in mounting host immune responses against pathogenic infections.     

Effects of N-enriched rock powder on soil chemistry,organic matter formation and plant nutrition in lignite-poor sandy mine spoil in the forest reclamation practice

The effects of a slow-release N-enriched rock powder on soil chemistry, on the development of the soil vegetation (field layer vegetation), on the nutritional status of pine seedlings (Pinus sylvestris L.), and on decomposition rates of cellulose in lignite-poor mine spoils were studied. In the initial phase after afforestation fertilization caused a significant increase in NO₃ ⁻-N concentrations in the soil solution of the top-soil (0–60 cm). Subsequently, NO₃ ⁻-N concentrations of all N fertilized treatments decreased with the exception of the highest N application area (500 kg N ha⁻¹). This decrease of NO₃ ⁻-N concentrations was related to the establishment of a field layer vegetation, which developed according to the amount of N applied. In the above-ground phytomass of the field layer vegetation a maximum N accumulation amount of 22 kg ha⁻¹ was measured. Cellulose decomposition increased with higher N application rates. In the second year after N-fertilization, the pine needles indicated insufficient supply for almost all nutrients except for N. The deficiency symptoms were most pronounced at the plots that had received the highest amounts of nitrogen. This phenomenon appears to be related to the competition by the field layer vegetation. This revised version was published online in June 2006 with corrections to the Cover Date. This revised version was published online in June 2006 with corrections to the Cover Date. This revised version was published online in June 2006 with corrections to the Cover Date.     

Population genetic structure of rock ptarmigan Lagopus mutus in Northern and Western Europe

Alpine species may be losing habitat because of global warming. Setting management priorities for such species is thus urgent and cannot be achieved without data on population structure. We studied the structure of rock ptarmigan (Lagopus mutus) populations in the Pyrenees, Alps and Norway, using six microsatellites. We found that rock ptarmigan in the Pyrenees were genetically impoverished compared with those in the Alps and Norway, and displayed a greater divergence (Pyrenees vs. Alps or Norway: theta(ST) = 0.16, Alps vs. Norway, theta(ST) = 0.04). In the Alps, despite a weak genetic differentiation between localities up to 200 km apart (theta(ST) = 0.011), a significant isolation-by-distance (IBD) effect was detected. When computed for each sex separately this IBD effect was significant for males but not for females, suggesting that males are highly philopatric.     

Spread of false alarms in foraging flocks of house sparrows

In group‐foraging species with no alarm signals, the sudden departure of neighbours can be used to inform the rest of the group about the detection of a threat. However, sudden departures are ambiguous because they can be triggered by factors unrelated to predator detection. We evaluated how animals react to the sudden departure of neighbours in groups of foraging house sparrows (Passer domesticus). We focussed on false alarms that occurred for no apparent reasons to us because predation attempts were not frequent. Three factors can explain how the sudden departure of a neighbour can influence reaction times, namely group size, the distance between neighbours, and predation risk. We predicted reaction times to be longer in larger groups where individual vigilance levels are low, and when group members are further apart and cannot easily monitor each other. In addition, we expected reaction times to be longer when predation risk is lower. Departures that are more temporally clumped are also expected to be less ambiguous and should trigger faster reaction times. Our results show that sparrows reacted faster, not more slowly, to the sudden departures of neighbours in larger groups, and, as predicted, more slowly when neighbours were more distant from each other. Reaction times were longer in one of the two study years in which predation risk was deemed lower. Sparrows reacted more quickly when earlier departures were more temporally clumped. The results thus provided partial support for the predictions, and future work is needed to assess how individuals react to fleeing responses by their neighbours in species with no alarm signals.