Field and laboratory investigations of budding in the tetillid sponge Cinachyrella cavernosa

The budding process of the tetillid sponge Cinachyrella cavernosa was studied for one year in the low intertidal zone near Mhapan (15°55′27.48″N, 73°33′29.89″E), on the central west coast of India. The sponges showed the highest budding frequency when the average water temperature of intertidal rock pools was 32.4±0.23°C (February–March), followed by a significant decrease in budding frequency at 28.2±0.12°C (April–July), and no budding at ≤25.9±0.12°C (August–November). Stepwise multiple regression analysis of physico‐chemical factors revealed temperature as the most prominent factor regulating the intensity of budding. Based on size and morphology, three stages of sponge buds were defined. The production of buds was found to be asynchronous, as adult sponges possessed buds of all three stages. Differences among these stages were examined at ultrastructural (in terms of spicules) and molecular (in terms of RNA/DNA) levels. Stage I (<0.5 mm dia‐meter) buds showed a complete absence of microscleres (sigmaspires), whereas stage II (0.5–1 mm) and stage III (>1 mm) buds contained all spicules characteristic of the adult sponge. There was a significant increase in RNA/DNA ratio from stage I to III, suggestive of a progressive increase in physiological activity during the developmental process. Additionally, we studied post‐settlement bud growth under field and laboratory conditions. Newly settled buds displayed a lower average‐specific growth rate in the field, owing to variability in environmental conditions, but more rapid growth under controlled conditions in the laboratory. This study highlights the role of abiotic factors in regulating the budding process and stresses the ecological significance of budding in maintaining natural sponge populations. Our data suggest that an increased frequency of budding under stressful conditions, such as high temperature, is an advantageous adaptation for these sponges. Buds showed rapid development, as no metamorphosis is involved, and retained the genotype of the parents, yielding high reproductive outputs and survival rates.     

Multiple biogeographical barriers identified across the monsoon tropics of northern Australia: phylogeographic analysis of the brachyotis group of rock-wallabies

The monsoon tropics of northern Australia are a globally significant biodiversity hotspot, but its phylogeography is poorly known. A major challenge for this region is to understand the biogeographical processes that have shaped the distribution and diversity of taxa, without detailed knowledge of past climatic and environmental fluctuations. Although molecular data have great potential to address these questions, only a few species have been examined phylogeographically. Here, we use the widely distributed and abundant short-eared rock-wallaby (Petrogale brachyotis; n = 101), together with the sympatric monjon (P. burbidgei; n = 11) and nabarlek (P. concinna; n = 1), to assess historical evolutionary and biogeographical processes in northern Australia. We sequenced ～1000 bp of mitochondrial DNA (control region, ND2) and ～3000 bp of nDNA (BRCA1, ω-globin and two anonymous loci) to investigate phylogeographic structuring and delineate the time-scale of diversification within the region. Our results indicate multiple barriers between the Top End (Northern Territory) and Kimberley (Western Australia), which have caused divergence throughout the Plio-Pleistocene. Eight geographically discrete and genetically distinct lineages within the brachyotis group were identified, five of which are separated by major river valleys (Ord, Victoria, Daly), arid lowlands and discontinuous sandstone ranges. It is likely that these barriers have similarly influenced genetic structure in other monsoonal biota.     

Genetic diversity and phylogeography in two diploid ferns,Asplenium fontanum subsp. fontanum and A. petrarchae subsp. bivalens,in the western Mediterranean

Asplenium fontanum subsp. fontanum and A. petrarchae subsp. bivalens are diploid rock ferns of limestone outcrops of the western Mediterranean region. Asplenium fontanum subsp. fontanum occurs from Valencia through northeastern Spain to the Alpes‐Maritimes and Swiss Jura. Asplenium petrarchae subsp. bivalens occurs only on Majorca, in Valencia and possibly in southern Spain. We analysed allozyme and chloroplast genetic marker diversity in 75 populations of A. fontanum subsp. fontanum and 12 populations of A. petrarchae subsp. bivalens sampled from across their respective ranges. The two species show similar levels of species and population genetic diversity to one another and to other diploid European Asplenium taxa. Both are predominantly outbreeding, as indicated by F_IS = 0.108 and 0.167 respectively. Substantial between‐population differentiation results largely from differentiation between regions. Isolation by distance operates over limited geographic ranges, up to 50 km. In A. fontanum subsp. fontanum, the major geographical differentiation between Valencia and the rest of the taxon range probably represents an ancient range fragmentation. A less pronounced differentiation divides populations in the SW from those in the NE of the range, with evidence for a biogeographic link between the eastern Pyrenees and southeastern France. High diversity in the Pyrenees may either represent ancient population differentiation, or a suture zone. In A. petrarchae subsp. bivalens, populations on Majorca exhibit a subset of the genetic diversity present in Valencia, although the two regions are strongly differentiated by differing allele frequencies. Dispersal from the mainland may have founded Majorcan populations, although a role for in situ island survival cannot be excluded.     

Dinosaur diversity and the rock record

Palaeobiodiversity analysis underpins macroevolutionary investigations, allowing identification of mass extinctions and adaptive radiations. However, recent large-scale studies on marine invertebrates indicate that geological factors play a central role in moulding the shape of diversity curves and imply that many features of such curves represent sampling artefacts, rather than genuine evolutionary events. In order to test whether similar biases affect diversity estimates for terrestrial taxa, we compiled genus-richness estimates for three Mesozoic dinosaur clades (Ornithischia, Sauropodomorpha and Theropoda). Linear models of expected genus richness were constructed for each clade, using the number of dinosaur-bearing formations available through time as a proxy for the amount of fossiliferous rock outcrop. Modelled diversity estimates were then compared with observed patterns. Strong statistically robust correlations demonstrate that almost all aspects of ornithischian and theropod diversity curves can be explained by geological megabiases, whereas the sauropodomorph record diverges from modelled predictions and may be a stronger contender for identifying evolutionary signals. In contrast to other recent studies, we identify a marked decline in dinosaur genus richness during the closing stages of the Cretaceous Period, indicating that the clade decreased in diversity for several million years prior to the final extinction of non-avian dinosaurs at the Cretaceous–Palaeocene boundary.     

Climate-induced changes in high elevation stream nitrate dynamics

Mountain terrestrial and aquatic ecosystems are responsive to external drivers of change, especially climate change and atmospheric deposition of nitrogen (N). We explored the consequences of a temperature-warming trend on stream nitrate in an alpine and subalpine watershed in the Colorado Front Range that has long been the recipient of elevated atmospheric N deposition. Mean annual stream nitrate concentrations since 2000 are higher by 50% than an earlier monitoring period of 1991–1999. Mean annual N export increased by 28% from 2.03 kg N ha⁻¹ yr⁻¹ before 2000 to 2.84 kg N ha⁻¹ yr⁻¹ in Loch Vale watershed since 2000. The substantial increase in N export comes as a surprise, since mean wet atmospheric N deposition from 1991 to 2006 (3.06 kg N ha⁻¹ yr⁻¹) did not increase. There has been a period of below average precipitation from 2000 to 2006 and a steady increase in summer and fall temperatures of 0.12 °C yr⁻¹ in both seasons since 1991. Nitrate concentrations, as well as the weathering products calcium and sulfate, were higher for the period 2000–2006 in rock glacier meltwater at the top of the watershed above the influence of alpine and subalpine vegetation and soils. We conclude the observed recent N increases in Loch Vale are the result of warmer summer and fall mean temperatures that are melting ice in glaciers and rock glaciers. This, in turn, has exposed sediments from which N produced by nitrification can be flushed. We suggest a water quality threshold may have been crossed around 2000. The phenomenon observed in Loch Vale may be indicative of N release from ice features such as rock glaciers worldwide as mountain glaciers retreat.     

种植方式和裸岩率对喀斯特洼地土壤养分空间分异特征的影响

选取桂西北典型喀斯特洼地，研究了种植方式和裸岩率对土壤养分空间分布的影响.结果表明:种植方式对土壤有机碳(SOC)、全氮(TN)、全磷(TP)、全钾(TK)、碱解氮(AN)、速效磷(AP)、速效钾(AK)和C/N有显著影响；裸岩率对SOC、TN、TP、TK、AN、AK和C/N有显著影响，对SOC、TN、TP和AN的影响程度大于种植制度的影响，这主要与农户在裸岩率较低的地段耕作强度较大有关；木豆 板栗地的SOC、TN、TP、TK、AN、AK等含量显著高于其它种植方式，说明退耕在一定程度上有利于土壤养分的积累；受地形地貌特征和土地利用结构的影响，SOC的空间分布表现为坡脚大于洼地;AP的空间分布与SOC不同，主要受施肥影响，表现为洼地高于坡脚.     

COMMUNITY DYNAMICS AND METABOLISM OF BENTHIC ALGAE COLONIZING WOOD AND ROCK SUBSTRATA IN A FOREST STREAM

Colonization dynamics and metabolism of algal communities on wood (small pieces of Douglas fir) and artificial rock (tiles) substrata were investigated in an open reach in Mack Creek, Cascade Mountain Range, Oregon, for 42 days. Chlorophyll a concentration was not significantly different between the two algal communities (ANOVA, P = 0.119). Even though differences in cell densities were not significantly different between the two algal communities (ANOVA, P = 0.063), biovolume and diversity were greater in epixylic than in epilithic communities (ANOVA, P = 0.011 and 0.002, respectively). The same algal taxa occurred on both substrata, but some of them (e.g. Ceratoneis arcus Grun., Cymbella minuta Hilse ex Rabh., Zygnema sp.) were more numerous on wood, whereas a few others preferred tiles (e.g. Achnanthes lanceolata (Bréb.) Grun.). Scanning electron microscopy revealed a much higher surface roughness on wood, which likely led to a patchy distribution of the algae and the development of stalked diatom species. However, adnate species adapted much better to the mainly flat surfaces of tiles. Net community primary productivity (NCPP) measured in 42-day-old substrata was moderate on tiles but negative on wood. Community respiration (CR) was significantly higher on wood than on tiles. Epixylic algal communities exhibited greater nitrogen demand than epilithic communities after ammonium addition. NCPP shifted to positive values on wood but did not increase on tiles. Despite metabolic differences, the variations between the two communities are more closely related to the physical characteristics of the substrata and the attachment abilities of the algal taxa.     

Morphometric and morphological delineation of southern African species of Aethomys (Rodentia: Muridae)

Five species of African rock rats, Aethomys namaquensis, A. granti, A. silindensis, A. nyikae and A. chrysophilus, have to date been recognized in southern Africa. While the first three species are craniometrically well-delineated, morphometric analysis of cytogenetically known and other specimens of A. chrysophilus revealed that it comprises two sympatric, morphologically similar species, the nominate species and the newly recognized A. ineptus. This is in agreement with observations on cranial morphology and earlier investigations involving cytogenetics, protein electrophoresis, and gross sperm and bacular morphology. Contrary to published reports, the Central African A. nyikae does not extend into southern Africa, and the single previous record from eastern Zimbabwe is probably based on a misidentification.     

Characterization and Identification of Asexual Strains of Pythium Associated with Root Rot of Rose in Japan

This study was conducted to survey the distribution of asexual isolates of Pythium in rose production and to characterize and identify them. Asexual isolates with proliferating globose sporangia belong to group P according to the key of van der Plaats‐Niterink (1981; Monograph of the genus Pythium. Studies in Mycology, Vol. 21, Centraalbueau Voor Schimmelcultures, Baarn, The Netherlands). Group P isolates were recovered from rotted roots of both cutting and miniature roses cultured in rock wool and ebb‐and‐flow culture systems, respectively, throughout the main rose production area of Japan. The typical feature of the P group isolates was that they could grow fast at high temperature, at least 30 mm per 24 h at 35°C. There was no difference between the P group isolates and P. helicoides in morphology and size of sporangia and sporangial germination mode. The symptoms caused by the group P isolates were root rot, followed by leaf blight and plant death in severe cases. In restriction fragment length polymorphism analysis of the rDNA‐ITS region, the banding patterns with five of six enzymes were identical between group P and P. helicoides, the only difference being seen with HhaI. In direct amplification analysis of minisatellite‐region DNA with M13 primer, group P and P. helicoides shared three of five distinct bands. In contrast, P. oedochilum and P. ostracodes showed different banding patterns except for each one band. The results suggest that the group P isolates obtained from rose root rot may be asexual strains of P. helicoides.