Biophysical insights into the binding characteristics of bovine serum albumin with dipyridamole and the influence of molecular interaction with β cyclodextrin

Abstract

The binding characteristic of anti-platelet drug dipyridamole has been investigated with a transport protein, serum albumin. A multi-spectroscopic approach has been employed, and the results were well supported by in silico molecular docking and simulation studies. The fluorescence quenching of serum albumin at three different temperatures revealed that the mechanism involved is static and the binding constant of the interaction was found to be of the order of 10⁴ M^?1. The reaction was found to be spontaneous and involved hydrophobic interactions. Synchronous, 3D fluorescence and CD spectroscopy indicated a change in conformation of bovine serum albumin (BSA) on interaction with DP. Using site-selective markers, the binding site of DP was found to be in subdomain IB. Molecular docking studies further corroborated these results. Molecular dynamic (MD) simulations showed lower RMSD values on interaction, suggesting the existence of a stable complex between DP and BSA. Furthermore, since β-Cyclodextrin (βCD) is used to improve the solubility of DP in ophthalmic solutions, therefore, the effect of (βCD) on the interaction of BSA and DP was also studied, and it was found that in the presence of βCD, the binding constant for BSA-DP interaction decreased. The present study is an attempt to characterize the transport of DP and to improve its bioavailability, consequently helping in dosage design to achieve optimum therapeutic levels.

Communicated by Ramaswamy H. Sarma     

Human mesenchymal stromal cell therapy for damaged cochlea repair in nod-scid mice deafened with kanamycin

Background

Kanamycin, mainly used in the treatment of drug-resistant-tuberculosis, is known to cause irreversible hearing loss. Using the xeno-transplant model, we compared both in vitro and in vivo characteristics of human mesenchymal stromal cells (MSCs) derived from adult tissues, bone marrow (BM-MSCs) and adipose tissue (ADSCs). These tissues were selected for their availability, in vitro multipotency and regenerative potential in vivo in kanamycin-deafened nod-scid mice.

原花青素对小鼠后肢缺血肌肉的作用及miR-133b的表达变化

肢体缺血后的氧化应激反应将导致肌肉损伤,刺激肌卫星细胞（satellite cells,SCs）的成肌分化,从而完成损伤修复,而肌源性miRNAs参与其中。原花青素（proanthocyanidins,PC）来源于植物多酚提取物,具有抗氧化应激的作用。但原花青素对缺血肌肉的作用和机制尚不明确。本文研究原花青素对小鼠后肢缺血肌肉的作用,探讨miR 133b在其中的表达及作用。雄性C57/BL6小鼠经左后肢缺血后随机分为：对照组（H₂O）、低浓度PC（low dose PC,LDPC）组（1 mg/kg）和高浓度PC（high dose PC,HDPC）组（20 mg/kg）。对缺血肢体运动功能评分：7 d时,对照组为1.33±0.14,LDPC组为1.50±0.15,HDPC组为2.08±0.23;14 d时,对照组为2.17±0.31,LDPC组为2.00±0.37,HDPC组为3.83±0.17。说明高浓度PC可促进缺血肢体运动功能恢复（P<0.05）。测定各组的氧化应激产物丙二醛含量,在7 d时：血浆中,对照组为32.85±7.61 nmol/μL,LDPC组为35.90±7.45 nmol/μL,HDPC组为10.46±2.49 nmol/μL;缺血肌肉中,对照组为39.75±7.61 nmol/μg,LDPC组为28.75±7.05 nmol/μg,HDPC组为15.80±3.63 nmol/μg。表明高浓度PC可有效降低后肢缺血小鼠体内氧化应激水平（P<0.05）。HE染色结果显示,高浓度组再生肌纤维比例（7 d,53.88%±8.13%;21 d,39.30%±0.37%）均明显高于（P<0.05）对照组（7 d,10.61%±3.00%;21 d,22.61%±3.16%）和低浓度组（7 d,14.57%±2.94%;21 d,18.74%±4.73%）。RT-qPCR检测缺血肌肉中miR-133b-3p含量,与对照组相比,高浓度组的miR-133b-3p表达上调（3.26倍,P<0.05）。生物信息学分析发现,PPP2CA、PPP2CB和MKP-1可能是miR-133b-3p的靶基因。Western印迹检测发现,与对照组相比,高浓度组PCNA、MyoD和ERK2表达升高,而p-ERK2表达下降（P<0.05）。以上结果说明,高浓度原花青素可降低缺血后的氧化应激反应,促进缺血肌肉再生,而miR-133b-3p和ERK信号通路可能参与其中。     

山西霍山灌丛空隙草本植物物种多样性与更新

采用物种重要值和物种多样性指数,分析了山西霍山灌丛空隙内主要草本组成及其多样性随灌丛空隙面积梯度的变化规律。结果表明:在自然状况下形成的10 m2的灌丛空隙最多,占51.2%。灌丛空隙内草本植物的重要值高于灌丛下草本,且以10~20 m2的空隙为最高。主要草本可分为3类:(1)对灌丛空隙更新反应不明显的草本,(2)对灌丛空隙有正更新反应的草本,(3)对灌丛空隙有负更新反应的草本。灌丛空隙内的物种丰富度、多样性指数和均匀度指数均高于灌丛下,而生态优势度均小于灌丛下,呈现"单峰型"的变化趋势,且在10~20 m2达到峰值。因此,适宜大小的灌丛空隙是森林生态系统草本层植物多样性维持的重要途径。     

Transformation of Atriplex gmelini plants from callus lines using Agrobacterium tumefaciens

Atriplex gmelini plants were regenerated via organogensis from hypocotyl explants. Callus lines were induced from the hypocotyl explants on Linsmaier and Skoog (LS) medium supplemented with 1 M benzyladenine and 5 M -naphthaleneacetic acid in the dark. Shoots were regenerated from the callus lines on LS medium supplemented with 20 M thidiazuron and 0.1 M -naphthaleneacetic acid under a high-intensity light condition (450 mol m^–2 s^–1). The regenerated shoots were rooted on LS medium without growth regulators to obtain fully developed plants. We succeeded in transforming Atriplex gmelini from callus lines using Agrobacterium tumefaciens.     

Neuronal Correlates of Spatial Working Memory in the Endbrain of Crows

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Early emergence increases survival of tree seedlings in Central European temperate forests despite severe late frost

Global warming is expected to result in earlier emergence of tree seedlings that may experience higher damages and mortality due to late frost in spring. We monitored emergence, characteristics, and survival of seedlings across ten tree species in temperate mixed deciduous forests of Central Europe over one and a half year. We tested whether the timing of emergence represents a trade‐off for seedling survival between minimizing frost risk and maximizing the length of the growing period. Almost two‐thirds of the seedlings died during the first growing period. The timing of emergence was decisive for seedling survival. Although seedlings that emerged early faced a severe late frost event, they benefited from a longer growing period resulting in increased overall survival. Larger seedling height and higher number of leaves positively influenced survival. Seedlings growing on moss had higher survival compared to mineral soil, litter, or herbaceous vegetation. Synthesis. Our findings demonstrate the importance of emergence time for survival of tree seedlings, with early‐emerging seedlings more likely surviving the first growing period.     

How are nitrogen availability,fine‐root mass,and nitrogen uptake related empirically? Implications for models and theory

Understanding the effects of global change in terrestrial communities requires an understanding of how limiting resources interact with plant traits to affect productivity. Here, we focus on nitrogen and ask whether plant community nitrogen uptake rate is determined (a) by nitrogen availability alone or (b) by the product of nitrogen availability and fine‐root mass. Surprisingly, this is not empirically resolved. We performed controlled microcosm experiments and reanalyzed published pot experiments and field data to determine the relationship between community‐level nitrogen uptake rate, nitrogen availability, and fine‐root mass for 46 unique combinations of species, nitrogen levels, and growing conditions. We found that plant community nitrogen uptake rate was unaffected by fine‐root mass in 63% of cases and saturated with fine‐root mass in 29% of cases (92% in total). In contrast, plant community nitrogen uptake rate was clearly affected by nitrogen availability. The results support the idea that although plants may over‐proliferate fine roots for individual‐level competition, it comes without an increase in community‐level nitrogen uptake. The results have implications for the mechanisms included in coupled carbon‐nitrogen terrestrial biosphere models (CN‐TBMs) and are consistent with CN‐TBMs that operate above the individual scale and omit fine‐root mass in equations of nitrogen uptake rate but inconsistent with the majority of CN‐TBMs, which operate above the individual scale and include fine‐root mass in equations of nitrogen uptake rate. For the much smaller number of CN‐TBMs that explicitly model individual‐based belowground competition for nitrogen, the results suggest that the relative (not absolute) fine‐root mass of competing individuals should be included in the equations that determine individual‐level nitrogen uptake rates. By providing empirical data to support the assumptions used in CN‐TBMs, we put their global climate change predictions on firmer ground.     

80％门静脉结扎后肝脏组织中MMP-9的表达与肝再生作用的相关性研究

目的：探讨基质金属蛋白酶-9（MMP-9）在大鼠80％门静脉分支结扎模型中大鼠增生肝脏组织中的表达及其与肝再生作用的关系。方法：健康SD雄性大鼠48只,随机平均分成假手术对照组（Sham）和门静脉结扎实验组（PVL）。观察术后1、3、7和14d保留侧肝叶重量／体重比值;下腔静脉采血后检测血清谷丙转氨酶（ALT）、谷草转氨酶（AST）值的变化;光镜下观察保留侧肝脏组织的病理形态变化;用免疫组化法检测增殖细胞核抗原（Proliferating cell nuclear antigen,PCNA）的表达,用免疫印记法检测MMP-9的表达,并进行统计分析。结果：80％门静脉分支结扎后,结扎侧肝叶呈进行性萎缩,保留侧肝叶重量／体重比值逐渐增加,7d达“平台期”;与对照纽明显不同,PVL组的ALT、AST的值在1h达到高峰,7d后回到正常水平;保留侧肝脏组织中PCNA阳性细胞计数与对照组比较,3d开始表述增强（P〈0．05）,7d以后逐渐恢复至正常水平（P〉0．05）;保留侧肝叶MMP-9蛋白的表达在术后3d开始增加,术后7d达到高峰。结论：MMP-9蛋白的表达在80％门静脉结扎后大鼠肝再生过程中发挥重要作用。