野生东亚钳蝎消化道可培养细菌的分离鉴定、耐药性及产消化酶活性

目的 分离东亚钳蝎消化道中的可培养细菌,并研究其产消化酶活性和耐药性,探讨消化道细菌对东亚钳蝎消化食物的影响。 方法 野生东亚钳蝎采用传统细菌分离培养方法分离其消化道内可培养细菌,利用16S rRNA序列进行细菌的分子鉴定;利用平板透明圈法测定可培养细菌产淀粉酶、蛋白酶、脂肪酶和纤维素酶等消化酶的活性;采用药敏纸片扩散法进行消化道可培养细菌的药敏试验。 结果 在东亚钳蝎消化道中共分离到4个属10种细菌,其中芽胞杆菌属7种,分别为蛋白水解芽胞杆菌、解淀粉芽胞杆菌、巨大芽胞杆菌、枯草芽胞杆菌、蜡样芽胞杆菌、婴儿芽胞杆菌和长形赖氨酸芽胞杆菌;葡萄球菌属、纤维微菌属和短波单胞菌属各1株,分别为松鼠葡萄球菌、纤维化纤维微细菌和泡囊短波单胞菌。对10种细菌的产消化酶活性分析表明,8种细菌有产消化酶活性,占细菌总数的80%;5种细菌有产蛋白酶活性,分别为蛋白水解芽胞杆菌、枯草芽胞杆菌、蜡样芽胞杆菌、松鼠葡萄球菌和纤维化纤维微细菌;7种细菌有产淀粉酶活性,分别为蛋白水解芽胞杆菌、解淀粉芽胞杆菌、巨大芽胞杆菌、枯草芽胞杆菌、蜡样芽胞杆菌、松鼠葡萄球菌和婴儿芽胞杆菌;未筛选到产纤维素酶和脂肪酶活性的细菌;蛋白水解芽胞杆菌、枯草芽胞杆菌、蜡样芽胞杆菌和松鼠葡萄球菌可同时产2种消化酶。在药敏试验中,8种细菌对多粘菌素B耐药,5种细菌对四环素耐药,3种细菌对万古霉素耐药。 结论 东亚钳蝎消化道中可培养细菌的组成相对单一,多数细菌有分泌淀粉酶和蛋白酶的功能,说明东亚钳蝎消化道中的细菌可能有协助其进行食物消化的功能。消化道细菌对抗生素多表现为敏感,推测其生存环境中抗生素的污染较少,同时在对东亚钳蝎人工饲养的场所进行消毒时,要谨慎选择抗生素,防止抗生素使用不当致使东亚钳蝎肠道菌群紊乱引起疾病。     

Phylogenomics and multigene phylogenies decipher two new cryptic marine algae from California,Gelidium gabrielsonii and G. kathyanniae (Gelidiales,Rhodophyta)

Molecular surveys are leading to the discovery of many new cryptic species of marine algae. This is particularly true for red algal intertidal species, which exhibit a high degree of morphological convergence. DNA sequencing of recent collections of Gelidium along the coast of California, USA, identified two morphologically similar entities that differed in DNA sequence from existing species. To characterize the two new species of Gelidium and to determine their evolutionary relationships to other known taxa, phylogenomic, multigene analyses, and morphological observations were performed. Three complete mitogenomes and five plastid genomes were deciphered, including those from the new species candidates and the type materials of two closely related congeners. The mitogenomes contained 45 genes and had similar lengths (24,963–24,964 bp). The plastid genomes contained 232 genes and were roughly similar in size (175,499–177,099 bp). The organellar genomes showed a high level of gene synteny. The two Gelidium species are diminutive, turf‐forming, and superficially resemble several long established species from the Pacific Ocean. The phylogenomic analysis, multigene phylogeny, and morphological evidence confirms the recognition and naming of two new species, describe herein as G. gabrielsonii and G. kathyanniae. On the basis of the monophyly of G. coulteri, G. gabrielsonii, G. galapagense, and G. kathyanniae, we suggest that this lineage likely evolved in California. Organellar genomes provide a powerful tool for discovering cryptic intertidal species and they continue to improve our understanding of the evolutionary biology of red algae and the systematics of the Gelidiales.     

The iterative process of plant species inventorying for obtaining reliable biodiversity patterns

We require representative data of species occurrence to explain plant diversity patterns, but most of the available information is incomplete and biased. To improve our knowledge, we suggest that species inventorying should be an iterative process encompassing the following: (1) the detection of taxonomic and geographical gaps; (2) the planning of a survey design to reduce such gaps; and (3) the evaluation of field sampling results. Here, we focus on the latter phase for the bryophytes of Terceira Island (Azores) for which we have previously estimated < 1% of the area as well surveyed based on historical collections. To examine the performance of our stratified survey based on two factors (land use and environmental regions), we used rarefaction curves, ANOVA tests and bootstrap sampling. We recorded 40% of all the species known for the island and presented eight new citations. The species assemblages remained similar between historical and current inventories. Most localities had completeness values > 85%, but we always exceeded the optimal sampling effort. Land uses and environmental regions affected species diversity, but, unexpectedly, to a different degree. Our study illustrates the difficulties of planning field surveys to obtain reliable biodiversity patterns, even when prior information and standardized sampling protocols are explicitly considered. © 2015 The Linnean Society of London, Botanical Journal of the Linnean Society, 2015, 177 , 491–503.     

A chalcone with potent inhibiting activity against biofilm formation by nontypeable Haemophilus influenzae

Nontypeable Haemophilus influenzae (NTHi), an important human respiratory pathogen, frequently causes biofilm infections. Currently, resistance of bacteria within the biofilm to conventional antimicrobials poses a major obstacle to effective medical treatment on a global scale. Novel agents that are effective against NTHi biofilm are therefore urgently required. In this study, a series of natural and synthetic chalcones with various chemical substituents were evaluated in vitro for their antibiofilm activities against strong biofilm‐forming strains of NTHi. Of the test chalcones, 3‐hydroxychalcone (chalcone 8 ) exhibited the most potent inhibitory activity, its mean minimum biofilm inhibitory concentration (MBIC₅₀) being 16 μg/mL (71.35 μM), or approximately sixfold more active than the reference drug, azithromycin (MBIC₅₀ 419.68 μM). The inhibitory activity of chalcone 8 , which is a chemically modified chalcone, appeared to be superior to those of the natural chalcones tested. Significantly, chalcone 8 inhibited biofilm formation by all studied NTHi strains, indicating that the antibiofilm activities of this compound occur across multiple strong‐biofilm forming NTHi isolates of different clinical origins. According to antimicrobial and growth curve assays, chalcone 8 at concentrations that decreased biofilm formation did not affect growth of NTHi, suggesting the biofilm inhibitory effect of chalcone 8 is non‐antimicrobial. In terms of structure–activity relationship, the possible substituent on the chalcone backbone required for antibiofilm activity is discussed. These findings indicate that 3‐hydroxychalcone (chalcone 8 ) has powerful antibiofilm activity and suggest the potential application of chalcone 8 as a new therapeutic agent for control of NTHi biofilm‐associated infections.     

12种不同产地铁皮石斛指纹图谱研究及重金属元素含量测定

以12种不同产地铁皮石斛新鲜茎段为材料,以Ultimate XB C18(4.6mm×250mm,5μm)乙腈-0.1%磷酸溶液为流动相进行梯度洗脱,流速1.0mL·min-1,检测波长270nm,柱温30℃。通过中药色谱指纹图谱相似度评价系统(国家药典委员会)进行相似度分析,并建立12个不同产地铁皮石斛指纹图谱。经微波消解处理材料后,采用ICP-AES原子吸收光谱法测定不同产地铁皮石斛新鲜茎段中重金属铜、镉、铅、汞的含量,分析不同产地铁皮石斛质量,为建立铁皮石斛质量标准提供理论依据。结果表明:(1)不同产地铁皮石斛指纹图谱共有23个特征峰,相似度为0.918~0.987,其中产自安徽大别山、云南文山的铁皮石斛相似度分别为0.918、0.935,相比其他产地具有一定的差异性。(2)通过聚类分析将12种不同产地铁皮石斛分为4类:安徽霍山、江苏南京、云南石屏、云南玉溪、云南思茅为一类,云南文山、浙江仙居为一类,云南红河、广西天峨、安徽大别山、福建宁化为一类,浙江天台单独为一类。(3)产自云南玉溪的铁皮石斛茎段中铜含量超标26.25%,产自福建宁化和江苏南京的镉含量分别超标27.33%和122.30%,其它产地铜、镉、铅、汞含量在国家现行安全值以内。     

Insulin producing cells established using non-integrated lentiviral vector harboring PDX1 gene

AIM: To investigate reprogramming of human adipose tissue derived stem cells into insulin producing cells using non-integrated lentivirus harboring PDX1 gene.METHODS: In this study, human adipose tissue derived stem cells(hADSCs) were obtained from abdominal adipose tissues by liposuction, selected by plastic adhesion, and characterized by flow cytometric analysis.Human ADSCs were differentiated into adipocytes and osteocytes using differentiating medium to confirm their multipotency. Non-integrated lentiviruses harboring PDX1(Non-integrated LV-PDX1) were constructed using specific plasmids(pLV-HELP, pMD2G, LV-105-PDX1-1).Then, hADSCs were transduced with non-integrated LVPDX1. After transduction, ADSCsPDX1+were cultured in high glucose DMEM medium supplement by B27, nicotinamide and βFGF for 21 d. Expressions of PDX1 andinsulin were detected at protein level by immunofluorescence analysis. Expressions of PDX1, neurogenin3(Ngn3), glucagon, glucose transporter2(Glut2) and somatostatin as specific marker genes were investigated at mRNA level by quantitative RT-PCR. Insulin secretion of hADSCsPDX1+in the high-glucose medium was detected by electrochemiluminescence test. Human ADSCsPDX1+were implanted into hyperglycemic rats.RESULTS: Human ADSCs exhibited their fibroblast-like morphology and made colonies after 7-10 d of culture.Determination of hADSCs identified by FACS analysis showed that hADSCs were positive for mesenchymal cell markers and negative for hematopoietic cell markers that guaranteed the lack of hematopoietic contamination. In vitro differentiation of hADSCs into osteocytes and adipocytes were detected by Alizarin red and Oil red O staining and confirmed their multilineage differentiation ability. Transduced hADSCs+PDX1became round and clusters in the differentiation medium. The appropriate expression of PDX1 and insulin proteins was confirmed using immunocytochemistry analysis.Significant expressions of PDX1, Ngn3, glucagon, Glut2and somatostatin were detected by quantitative RTPCR. hADSCsPDX1+revealed the glucose sensing ability by expressing Glut2 when they were cultured in the medium containing high glucose concentration. The insulin secretion of hADSCsPDX1+in the high glucose medium was 2.32 μU/mL. hADSCsPDX1+implantation into hyperglycemic rats cured it two days after injection by reducing blood glucose levels from 485 mg/dL to the normal level.CONCLUSION: Human ADSCs can differentiate into IPCs by non-integrated LV-PDX1 transduction and have the potential to be used as a resource in type 1 diabetes cell therapy.     

Effect of influent COD/SO4(2-) ratios on mesophilic anaerobic reactor biomass populations: physico-chemical and microbiological properties

The competitive and syntrophic interactions between different anaerobic bacterial trophic groups in sulphate limited expanded granular sludge bed (EGSB) reactors was investigated. The outcome of competition between the sulphate-reducing, methanogenic and syntrophic populations after development in reactors at varying influent COD/SO4 (2-) ratios was examined in batch activity tests with the inclusion of specific sulphate reducing bacteria (SRB) and methane producing archaea (MPA) inhibitors. SRB species could not out-compete MPA species for acetate at influent COD/SO4 (2-) ratios as low as 2. The SRB were seen to play a more significant role in the conversion of hydrogen but did not become completely dominant. HMPA were responsible for hydrogen utilization at an influent COD/SO4 (2-) ratio of 16, and were still dominant when the ratio was reduced to 4. It was only when the COD/SO4 (2-) ratio was reduced to 2 that the HSRB assumed a more influential role. SRB species were significant in the degradation of propionate at all COD/SO4 (2-) ratios applied. Sludge samples were analysed by scanning electron microscopy (SEM), granule size distribution and fluorescent in situ hybridization (FISH), combined with confocal laser scanning microscopy (CLSM), to monitor any changes in granule morphology under the various COD/SO4 (2-) ratios imposed during the reactor trial. In situ hybridization with domain- and species-specific oligonucleotide probes demonstrated a layered architecture with an outer layer harboring mainly Eubacterial cells and an inner layer dominated by Archaeal species.     

大鼠骨骼肌卫星细胞诱导分化为胰岛素生成细胞的研究

目的探讨大鼠骨骼肌卫星细胞（MDSCs）定向诱导分化为胰岛素生成细胞（IPCs）,为1型糖尿病的干细胞治疗提供一种新的研究思路。 方法通过二次酶消化法和差速贴壁培养法分离、培养大鼠MDSCs,利用不同的诱导培养液使MDSCs定向分化为IPCs,并对诱导后细胞进行形态观察,通过双硫腙染色和免疫组化染色对MDSCs-IPCs形态进行鉴定,采用Q-PCR和Western Blot方法检测MDSCs-IPCs中C-peptide和Insulin的表达,通过胰岛素释放实验检测MDSCs-IPCs的生物学功能,β细胞和MDSCs-IPCs两组间比较采用t检验。 结果MDSCs在接种4 h后开始贴壁部分细胞伸出小的突起,48 h后绝大多数细胞贴壁呈梭形、胞浆丰富、折光度高。随着培养时间的延长,细胞的梭形形状更为明显且生长迅速。免疫组化结果显示细胞表达Desmin、α-Sarcomeric Actinin、MyoD1、Myf5和PAX7。成胰诱导后MDSCs形成胰岛样的圆形细胞团,双硫腙染色呈猩红色,Insulin免疫组化染色阳性。Q-PCR结果显示MDSCs-IPCs中C-peptide和Insulin mRNA表达量分别是β细胞的0.73倍（P > 0.05）和0.79倍（P > 0.05）。胰岛素释放实验显示,5.6 mmol/L和16.7 nmlol/L葡萄糖刺激培养2 h后,β细胞和MDSCs-IPCs分泌胰岛素量分别为[（20.3±4.2）mU/L]、[（16.1±3.7）mU/L]、[（60.5±9.3）mU/L]和[（40.9±7.3）mU/L],葡萄糖可调节MDSCs-IPCs胰岛素的分泌。 结论MDSCs易于分离培养、增殖能力强,体外可诱导分化为有功能的IPCs,适合作为再生医学的种子细胞。     

提高表柔比星质量与生产水平的研究

柔红霉素产生菌S．Coeruleorubidus经N^ 、Co^60理化诱变剂选育后,获得的高产菌株经发酵罐应用后,其发酵产率分别提高25．8％、17．6％,累计净增利润超亿元,经分离收集的活性生物精品制成表柔比星,纯度提高4％,杂质比例下降2倍以上,收率提高50％,符合最新国际权威药典标准,产品畅销世界。