A method for determining overall protein fold from NMR distance restraints

Summary We describe a simple method for determining the overall fold of a polypeptide chain from NOE-derived distance restraints. The method uses a reduced representation consisting of two particles per residue, and a force field containing pseudo-bond and pseudo-angle terms, an electrostatic term, but no van der Waals or hard shell repulsive terms. The method is fast and robust, requiring relatively few distance restraints to approximate the correct fold, and the correct mirror image is readily determined. The method is easily implemented using commercially available molecular modeling software.     

银额果蝇的B染色体研究:1.昆明群体的Bs数目和频率

本研究发现银额果蝇昆明群体有丝分裂中期核型中存在B染色体,出现频率为69.1%。目前,在已研究过的来自各个地区的银额果蝇中,昆明群体的B染色体频率最高。B染色体数目为1-6条。该群体内单雌系间的B染色体数目不同,个体间和细胞间的B染色体数目也不同。在核型中,B染色体最小,形态稳定,点状,C-带和G-带呈阳性。     

Genetic variation in relation to demography of peripheral pool frog populations (Rana lessonae)

Summary Genetic variation in an isolated northern metapopulation of the pool frog (Rana lessonae) in Sweden was compared to that of Central European populations using enzyme electrophoresis and literature data. Of the 31 loci scored, two (EST-2 andIDH-2) were polymorphic while no variation occurred in seven of the eight loci which are polymorphic in Central European populations.The heterozygosity level of the Swedish pool frogs is very low compared to that of other anuran populations, but their mean proportion of fertilized eggs within egg masses (97.5%) was not lower than in more heterozygous species, and their body size-specific fecundity did not differ from that of Polish conspecifics. The low genetic variability of the Swedish pool frogs is discussed in relation to features of the local populations such as size (N), calculated effective size (N _e ) reproductive success and probable history. It is concluded that long-term strong fluctuations in population size caused by reporductive failure in cold years have contributed more to the low genetic variability than could a single founder event due to a recent introduction by man.     

Characteristics of dispersal in sexually mature dragonflies

Abstract.

• 1 The population dynamics of a natural population of Sympetrum danae (Sulzer) were studied, by means of a mark—release—recapture method, to find indications of dispersal by mature adults. Additional information on orientation and the influence of phenotype (including age), density and weather was obtained by observations under natural conditions and in a large outdoor field cage.
• 2 80% of all mature adults caught around the natural pond were estimated to be immigrants. Considerable immigration was confirmed by the abdomen length of unmarked matures which did not accord with that expected from the locally emerged population. Total numbers captured and the minimum number known to be alive fell sharply at the time when most individuals were mature. At the same time, new matures continued to enter and disappear from the study area at an increasing rate.
• 3 Dispersive behaviour (escape flights) in the field enclosure was primarily age dependent in both sexes: it occurred from an age of 25–30 days onwards. This coincides with the time-lag between the emergence peak and increased dispersal in the field. Secondary effects on escape flights suggested that males tended to abandon low density areas.
• 4 Males flew relatively more southward than females.

     

The seasonality of phytoplankton in African lakes

Although some study of the subject began in 1899, wide-ranging information from African water-bodies has only become available since 1950. Important developments included the establishment of long-term centres of research, the adoption of improved methods for quantitative algal sampling, the more intensive study of environmental conditions, the beginnings of experimental testing, and the improvement of taxonomic knowledge.At higher latitudes (> 20 °) examples of pronounced algal seasonality are long-established; they are accompanied and influenced by marked changes in radiant energy income and so water temperature, and often by effects of seasonal water input. Illustrations are given from lakes in Morocco and South Africa.More generally in Africa, including the tropical belt, annual patterns of phytoplankton seasonality are usually either dominated by hydrological features (water input-output) or by hydrographic ones (water-column structure and circulation). Examples of both types are discussed, together with instances (e.g. L. Volta) of combined hydrological and hydrographic regulation. In both the seasonal abundance of diatoms is often distinct and complementary to that of blue-green algae, with differing relationships to vertical mixing and water retention.Horizontal variability in the seasonal cycle is especially pronounced in the larger or morphometrically subdivided lakes. Some inshore-offshore differentiation is also known to affect phytoplankton quantity (e.g. L. George) and species composition (e.g. L. Victoria). Longitudinal differentiation is common in elongate basins especially when with a massive or seasonal inflow at one end (e.g. L. Turkana, L. Nubia, L. Volta); occasional terminal upwelling can also be influential (e.g. southern L. Tanganyika). Such examples grade into the longitudinally differentiated seasonality of flowing river-reservoir systems, as studied on the Blue and White Niles.The annual amplitude of population density, expressed in orders of magnitude (=log₁₀ units), is one measure of seasonal variability. It can exceed 3 orders both in systems subject to hydrological wash-out (e.g. Nile reservoirs) and in the more variable species components of lakes of long retention (e.g. L. Victoria). Low amplitudes can be characteristic of some components (e.g. green algae in L. Victoria) or of total algal biomass (e.g. L. George, L. Sibaya).Seasonal changes may be subordinated to inter-annual ones, especially in shallow and hydrologically unstable lakes (e.g. L. Nakuru).     

Influence of Meloidogyne incognita on Resistant and Susceptible Sweet Potato Cultivars

Effects of several population densities ofMeloidogyne incognita on the sweet potato cultivars Centennial (susceptible) and Jasper (moderately resistant) were studied. Field plots were infested with initial levels (Pi) of 0, 10, 100, 1,000, 5,000, and 10,000 eggs and juveniles/500 cm³ soil in 1980 and 0, 100, 1,000, 2,000, 3,000, 4,000, and 5,000 in 1981. M. incognita population development trends were similar on both cultivars; however, at high Pi, more eggs and juveniles were recovered from Centennial than from Jasper. The highest Pi did not result in the highest mid-season (Pm) counts. Pi was negatively correlated with the number of marketable roots and root weight but positively correlated with total cracked roots, percentage of cracked roots, and cracking severity. Jasper tolerated higher Pi with greater yields and better root quality than Centennial. Cracking of fleshy roots occurred with both cultivars at low Pi.     

黄海车牛山岛白腰雨燕的繁殖习性及种群动态

本文为作者于1980—1981年对黄海车牛山岛白腰雨燕Apuspacificus pacificus (Latham)的初步研究。内容包括对繁殖习性的观察;对繁殖周期、卵孵化率、雏鸟成活串以及出生率等的统计。并对海岛生态环境下白腰雨燕种群数量的变动及其影响因素,作初步探讨。     

Ecological aspects of a silicified bivalve fauna from the Silurian of Gotland

The silicified Wenlockian (Silurian) bivalve fauna from MÖllbos, Gotland, is part of a life assemblage. The vast number of shells show unusual phenomena, e.g. shell repair, pearl and tumour formation, etc. A number of shells contain epibionts and bored, round holes. Presumptive predators of the bivalve community are discussed. Size-frequency distribution of the two most abundant species possibly reflects age classes. The fauna, comprising eleven species, is dominated by deposit-feeders (90 %). They exhibit niche diversification, including at least three different feeding levels within the sediment.     

The population dynamics of some freshwater carideans (Crustacea: Decapoda) in Hong Kong,with special reference to Neocaridina serrata (Atyidae)

During a 15-month investigation of the population dynamics of three caridean shrimp species in the Lam Tsuen River, New Territories, Hong Kong, the numbers of the commonest species, Neocaridina serrata (Stimpson)(Atyidae), were reduced as water temperatures fell. By contrast, Caridina lanceifrons Yu became more numerous during the winter. The relatively scarce Macrobrachium hainanense (Parisi)(Palaemonidae) tended to be more abundant during the summer, and the abundance of this species was directly correlated with that of N. serrata. The population size of these two species was positively correlated with water temperatures prevailing one and two months prior to the collection of samples, but there was no significant relationship between C. lanceifrons abundance and water temperature.All species exhibited similar growth patterns with an inflection at the attainment of sexual maturity, occurring after the (presumed) 14th moult for N. serrata and in the (presumed) 13th and 18th stadium for C. lanceifrons and M. hainanensis respectively. Ovigerous shrimps of all species were only recorded when water temperatures exceeded 20 °C and the % incidence of ovigerous N. serrata was positively correlated with prevailing temperatures. It is suggested that restriction of freshwater caridean breeding periods by low temperatures may be common in the subtropics while perennial breeding is more likely to be typical of tropical regions.The mean carapace length of N. serrata populations was negatively correlated with prevailing temperatures, but more strongly correlated with temperatures recorded one and two months prior to sampling when gametogenesis may have taken place. Smallest mean sizes were recorded in late summer upon the cessation of juvenile recruitment. N. serrata has a maximum longevity of approximately 12 months and reproduction occurs in the 7th month of life or later. The hatchlings are well developed and clutch size is not related to the size of the brooding female. An annual life cycle, as seen in N. serrata, may be typical of many small freshwater carideans.Department of Zoology, The University of Hong Kong