Sustainability indices for exploited populations

Evaluating the sustainability of hunting is key to the conservation of species exploited for bushmeat. Researchers are often hampered by a lack of basic biological data, the usual response to which is to develop sustainability indices based on highly simplified population models. However, the standard indices in the bushmeat literature do not perform well under realistic conditions of uncertainty, bias in parameter estimation, and habitat loss. Another possible approach to estimating the sustainability of hunting under uncertainty is to use Bayesian statistics, but this is mathematically demanding. Red listing of threatened species has to be carried out in extremely data-poor situations: uncertainty has been incorporated into this process in a relatively simple and intuitive way using fuzzy numbers. The current methods for estimating sustainability of bushmeat hunting also do not incorporate spatial heterogeneity. No-take areas are one management tool that can address uncertainty in a spatially explicit way.     

Developing Native Multispecies Sod: An Alternative Rehabilitation Method for Disturbed Lands

Natural and anthropogenic disturbance provides a mechanism for resetting the species assemblage within natural communities. Following anthropogenic disturbance particularly, there are generally more weedy species. Restoration of ecosystem structure and function in disturbed areas could aid in the control of these undesirable species. Attempts to re‐establish vegetation via direct sowing, hydroseeding, drill seeding, imprinting or plugging of either native or non‐native species can be effective, but can result in increased erosion and weed proliferation prior to desirable cover of the intended species. The use of native species for rehabilitation can be preferable because non‐native species are often less suited to the local environment and can pose a threat to the integrity of adjacent ecosystems. Native multispecies sod could become a useful rehabilitation tool, but research is needed to determine which species to use and the appropriate number of species to include. Mixtures of 4–7 native species were grown for 7 months, and clipped dry biomass, species percent abundance, and total ground cover were assessed over time in order to determine the suitability of 20 native species for sod production. Despite differences between mixtures at some harvests, all mixtures established and produced similar biomass by the end of the study. Final percent cover varied widely among species; 16 of the 20 species increased significantly over the course of production. Differences in total ground cover between mixtures were explained by the growth of the particular species rather than any synergistic effect of species diversity.     

Composite analysis of black duck breeding population surveys in eastern North America

Waterfowl are monitored in eastern Canada and the northeastern United States with 2 surveys: a transect survey from fixed-wing aircraft and a plot survey conducted from helicopters. The surveys vary in extent, but overlap exists in a core area of 9 strata covering portions of all provinces from Ontario east to Newfoundland. We estimated population change for American black ducks (Anas rubripes) and mallards (Anas platyrhynchos) from these surveys using a log-linear hierarchical model that accommodates differences in sample design and visibility associated with these survey methods. Using a combined analysis of the surveys based on total indicated birds, we estimate the American black duck population to be 901,700 (95% CI: 715,200–1,274,000) in 2011, with 526,900 (95% CI: 357,500–852,300) mallards in the surveyed area. Precision of estimates varies widely by species and region, with transect surveys providing less precise results than plot surveys for black ducks in areas of overlap. The combined survey analysis for black ducks in the eastern survey region produced estimates with an average yearly coefficient of variation (CV) of 12.1% for the entire area and an average CV of 6.9% in the plot survey area. Mallards, which had a more limited distribution in the region, had an average yearly CV of 22.1% over the entire region, and an average CV of 27.7% in the plot survey area. Hierarchical models provide a rich framework for analyzing and combining results from complex survey designs, providing useful spatial and temporal information on population size and change in these economically important species. © 2012 The Wildlife Society.     

Cost-efficient selection of a marker panel in genetic studies

Genetic techniques are frequently used to sample and monitor wildlife populations. The goal of these studies is to maximize the ability to distinguish individuals for various genetic inference applications, a process which is often complicated by genotyping error. However, wildlife studies usually have fixed budgets, which limit the number of genetic markers available for inclusion in a study marker panel. Prior to our study, a formal algorithm for selecting a marker panel that included genotyping error, laboratory costs, and ability to distinguish individuals did not exist. We developed a constrained nonlinear programming optimization algorithm to determine the optimal number of markers for a marker panel, initially applied to a pilot study designed to estimate black bear abundance in central Georgia. We extend the algorithm to other genetic applications (e.g., parentage or population assignment) and incorporate possible null alleles. Our algorithm can be used in wildlife pilot studies to assess the feasibility of genetic sampling for multiple genetic inference applications. © 2011 The Wildlife Society.     

Take two people—a genetics teaching kit

This easily made kit has proved very effective in teaching genetics to pupils of low ability     

Synthesizing artificial cells from giant unilamellar vesicles: State‐of‐the art in the development of microfluidic technology

Microfluidic technology – the manipulation of fluids at micrometer scales – has revolutionized many areas of synthetic biology. The bottom‐up synthesis of “minimal” cell models has traditionally suffered from poor control of assembly conditions. Giant unilamellar vesicles (GUVs) are good models of living cells on account of their size and unilamellar membrane structure. In recent years, a number of microfluidic approaches for constructing GUVs has emerged. These provide control over traditionally elusive parameters of vesicular structure, such as size, lamellarity, membrane composition, and internal contents. They also address sophisticated cellular functions such as division and protein synthesis. Microfluidic techniques for GUV synthesis can broadly be categorized as continuous‐flow based approaches and droplet‐based approaches. This review presents the state‐of‐the‐art of microfluidic technology, a robust platform for recapitulating complex cellular structure and function in synthetic models of biological cells.     

Using microphone arrays to examine effects of observers on birds during point count surveys

ABSTRACT Point count surveys are widely used for monitoring songbird populations, but little is known of the effect of the observer on songbird behavior during point counts. We used a novel, wireless array of recorders to determine the location of singing birds with and without the presence of an observer. The array consisted of seven autonomous recording units synchronized to Global Positioning System (GPS) clocks, set around the perimeter of a 50‐m‐radius circle with one in the middle. Units were set to record automatically from half an hour before dawn until 10:00 each morning. We sampled 26 different locations in old fields at the Prince Edward Point National Wildlife Area in eastern Ontario between 1 June and 4 July 2007. Position estimates derived from a time‐lag cross‐correlation algorithm had a mean error of 1.7 m within 50 m and 5.6 m at 100 m from the center of the array. We found no difference in the positions of birds when an observer was present or absent. We also found no difference in the number of individuals or species detected or in the onset of singing. Our results suggest that, at least in the community we studied, observers conducting point counts do not cause significant changes in bird behavior.     

Estimating changes in mean population age using the death distributions of live‐captured medflies

1. A simple, low‐cost approach to estimating population ageing was introduced based on a modified version of the captive cohort method – a technique developed earlier (Carey et al., Aging Cell, 7 , 426–437, 2008) in which information on the remaining lifespans of live‐captured medflies of unknown age is used to estimate the overall population age structure. 2. To test this approach approximately 1200 medflies near Volos, Greece were live captured from daily sampling over a 3‐month field season. 3. This simplified method reported: (i) an extraordinary post‐capture longevity of wild medflies in early season (>200 days in longest lived); (ii) a decrease of 50–75 days in the mean longevity from early‐season to late‐season flies; (iii) seasonality of frailty as indicated by the shorter‐lived flies in late autumn; (iv) cessation of fly emergence in late season as indicated by the absence of long‐lived individuals (indicating newly emerged at capture) sampled in the autumn; and (v) increase in mean age from about 20 days in early season to approximately 60 days in late season. 4. The applications of this simplified captive cohort method are discussed, including its use in the analysis of insect vector populations, Drosophila ecology and ageing in the wild, demographic toxicology, and age bias in sampling.