New insights into the functional roles of reactive oxygen species during embryo sac development and fertilization in Arabidopsis thaliana

Previously considered as toxic by-products of aerobic metabolism, reactive oxygen species (ROS) are emerging as essential signaling molecules in eukaryotes. Recent evidence showed that maintenance of ROS homeostasis during female gametophyte development is crucial for embryo sac patterning and fertilization. Although ROS are exclusively detected in the central cell of mature embryo sacs, the study of mutants deficient in ROS homeostasis suggests that controlled oxidative bursts might take place earlier during gametophyte development. Also, a ROS burst that depends on pollination takes place inside the embryo sac. This oxidative response might be required for pollen tube growth arrest and for sperm cell release. In this mini-review, we will focus on new insights into the role of ROS during female gametophyte development and fertilization. Special focus will be made on the mitochondrial Mn-Superoxide dismutase (MSD1), which has been recently reported to be essential for maintaining ROS homeostasis during embryo sac formation.     

Figs (Ficus spp.) and fig wasps (Chalcidoidea, Agaonidae): hypotheses for an ancient symbiosis

Figs and their pollinating fig wasps are dependent on one another for propagation of their own kinds. The wasps reproduce by ovipositing through the styles of female flowers within the closed fig receptacles (syconia). About half of the female flowers within the syconia of monoecious figs have styles which are longer than the ovipositors of the wasp, and they will therefore produce seeds rather than wasp larvae. Since a longer ovipositor would enable a wasp to reach more ovules and deposit more eggs, the question arises at to why longer ovipositors have not evolved.
In an attempt to answer this question, four seemingly plausible hypotheses are examined but each is shown to be problematical in some way. Consideration is then given to a fifth hypothesis which proposes that ovipositor length is constrained by abortion of syconia with relatively few seed embryos and many agaonid larvae. It is argued first that this pattern of abortion will be selected during a sustained period of heavy wasp infestation because seeds will then become scarce relative to pollen-carrying wasps. Increased expenditure by the fig on seed production would therefore be favoured by natural selection. A greater expenditure on seeds would occur if young syconia with exceptionally heavy wasp infestations were dropped and the saved nutrients invested in syconia of a subsequent crop containing average levels of wasp larvae and seeds. Provided that the energy and nutrient cost of dropping young syconia is small, the selective advantage to the wasp of longer ovipositors is eliminated in this way. A stable coexistence of figs and wasps is therefore possible. The paper concludes by discussing two general predictions of the abortion hypothesis, and how these may be tested.     

Pollinator preferences and the persistence of crop genes in wild radish populations (Raphanus raphanistrum, Brassicaceae)

Crop-weed hybridization can potentially influence the evolutionary ecology of wild populations. Many crops are known to hybridize with wild relatives, but few studies have looked at the long-term persistence of crop genes in the wild. This study investigated one factor in the hybridization process in radish: differential pollinator visitation to wild radish (Raphanus raphanistrum) vs. crop-wild F1 hybrids (R. sativus x R. raphanistrum). Wild genotypes had yellow flowers, a recessive single-locus trait, whereas hybrids always had white or pale pink flowers. In experimental arrays in northern Michigan, total pollinator visitation was significantly biased toward wild plants when the frequencies of wild and hybrid plants were equal. Syrphid flies, the most frequent visitors, preferred wild plants while bumble bees showed no preference. This pattern was also observed when hybrid plants were overrepresented in the array (12 hybrid:2 wild). In contrast, when hybrid plants were rare (2 hybrid:12 wild), neither morph was preferred by any pollinator group. Later in the summer, pollinators were also observed in a large experimental garden with nearly equal frequencies of wild and hybrid plants. Cabbage butterflies (Pieris rapae) strongly overvisited wild plants, while bumble bees showed a slight preference for hybrids. Taken together, these studies suggest that F1 hybrids may not be at a disadvantage with regard to pollinator visits when they occur at low frequencies or when bumble bees are frequent flower visitors. Thus, variation in the proportion of white-flowered morphs among wild radish populations could be influenced by different histories of crop-to-wild hybridization, as well as by variation in the composition of local pollinator taxa.     

Impact of mate availability, population size, and spatial aggregation of morphs on sexual reproduction in a distylous, aquatic plant

In distylous, self-incompatible plants, clonal propagation, unbalanced floral morph frequencies, and reduced population size can interfere with the functioning of distyly by compromising legitimate intermorph pollinations, resulting in reduced reproductive output. Here, we examined the mating system and the impact of mate availability, population size, and spatial aggregation of morphs on reproductive output in the distylous, clonal, aquatic plant Hottonia palustris. Controlled pollinations under greenhouse conditions detected no spontaneous selfing without the action of a pollen vector (autonomous autogamy) and demonstrated very low fruit and seed development after self-pollination. Intermorph (legitimate) crossings resulted in high reproductive output in both floral morphs (long- and short-styled individuals), whereas intramorph (illegitimate) crossings decreased fruit and seed development by more than 50%, indicating that the species has partial intramorph-incompatibility. In natural populations, small population size and increasing deviation of floral morph frequencies negatively affected reproductive outcome. Individuals of the majority morph type developed significantly fewer fruit and seeds than individuals of the minority morph type. This rapid decline in fecundity was symmetrical, indicating that regardless of which morph was in the majority, the same patterns of negative frequency-dependent mating occurred. Increasing spatial isolation between compatible morphs significantly reduced fruit and seed set in both morphs similarly. This study provides clear indications of frequency- and context-dependent mating in natural populations of a distylous plant species.     

Effect of three pollination methods on embryo development and seedset in intra- and interspecific crosses between seven Lilium species

Summary Interspecific crosses were made between seven Lilium species, viz. L. candidum, L. concolor, L. dauricum, L. henryi, L. longiflorum, L. nepalense and L. rubellum. A complete diallel cross was carried out between these seven species, including self- and intraspecific pollinations using three pollination methods: normal pollination on the stigma, pollination on the ovary after cutting the style, and pollination on the stigma with the aid of mentor (non-functional, compatible) pollen. Embryo rescue, starting 35 days after pollination, was applied to all interspecific combinations. The percentage of successful crosses was about 2.8% after normal pollination, 5.4% after cut-style pollination and 3.8% with the mentor pollen technique. Crosses with L. nepalense were exceptional in that embryos died during the embryo culture phase. Seventeen cross combinations (including 4 reciprocals) yielded 62 embryo plantlets from 839 interspecific pollinations.     

Binding of methacycline to human serum albumin at subdomain IIA using multispectroscopic and molecular modeling methods

This study was designed to examine the interaction of methacyline (METC) with human serum albumin (HSA) by multispectroscopy and a molecular modeling method under simulative physiological conditions. The quenching mechanism was suggested to be static quenching based on fluorescence and ultraviolet–visible (UV–Vis) spectroscopy. According to the Vant' Hoff equation, the values of enthalpy (?H) and entropy change (?S) were calculated to be ?95.29 kJ/mol and ?218.13 J/mol/K, indicating that the main driving force of the interaction between HSA and METC were hydrogen bonds and van der Waals's forces. By performing displacement measurements, the specific binding of METC in the vicinity of Sudlow's site I of HSA was clarified. An apparent distance of 3.05 nm between Trp214 and METC was obtained via the fluorescence resonance energy transfer (FRET) method. Furthermore, the binding details between METC and HSA were further confirmed by molecular docking studies, which revealed that METC was bound at subdomain IIA through multiple interactions, such as hydrophobic effect, polar forces, hydrogen bonding, etc. The results of three‐dimensional fluorescence and Fourier transform infrared (FTIR) spectroscopy showed that METC caused conformational and some microenvironmental changes in HSA and reduced the α‐helix significantly in the range of 52.3?40.4% in HSA secondary structure. Moreover, the coexistence of metal ions such as Ca²⁺, Al³⁺, Fe³⁺, Zn²⁺, Cu²⁺, Cr³⁺ and Cd²⁺ can decrease the binding constants of METC–HSA. Copyright © 2012 John Wiley & Sons, Ltd.     

苦苣苔科镜像花的多样性及演化

泛热带分布的苦苣苔科(Gesneriaceae)在我国南方具有极高的物种丰富度与特有率,花部特征变化丰富,是研究物种形成与适应演化的代表类群。镜像花(mirror-image flowers)是极为特化的传粉系统,在苦苣苔科中出现了较多的不同类型,可能与苦苣苔科物种多样性形成与维持有关。该研究总结与分析了苦苣苔科镜像花的类型多样性以及系统分布与适应演化等,讨论了镜像花对苦苣苔科物种形成与维持的积极意义。结果表明:镜像花仅分布在亚洲和非洲的苦苣苔亚科(Didymocarpoideae)的7个属,在历史上就至少发生了5次独立起源。长冠苣苔属(Rhabdothamnopsis)、南洋苣苔属(Henckelia)及长蒴苣苔属(Didymocarpus)镜像花的花柱与可育雄蕊分别向左、右两侧偏转,形成互补镜像花;蛛毛苣苔属(Paraboea)、喜鹊苣苔属(Ornithoboea)、非洲堇属(Saintpaulia)镜像花缺乏与花柱对应侧偏的可育雄蕊(非互补镜像花);而海角苣苔属(Streptocarpus)直立堇兰亚属(subg.Streptocarpella Engler)则同时出现了互补、非互补镜像花。不同于其他被子植物(离瓣花、缺乏花冠筒),苦苣苔科中的镜像花大多伴随着明显的花冠筒、内藏的雄蕊、合生的花药,以非互补镜像花为主;传粉者以小型的无垫蜂(Amegilla spp.)和熊蜂(Bombus spp.)为主。这些特殊的花部综合征与特化的传粉机制,提高了传粉精确性,可能促进了传粉隔离与物种适应辐射。今后的一个研究重点应通过分子系统发育方法,进一步揭示苦苣苔亚科互补与非互补镜像花的进化顺序及其在物种分化与长距离扩散过程中的可能作用。     

Large scale maximum average power multiple inference on time-course count data with application to RNA-seq analysis

Experiments that longitudinally collect RNA sequencing (RNA-seq) data can provide transformative insights in biology research by revealing the dynamic patterns of genes. Such experiments create a great demand for new analytic approaches to identify differentially expressed (DE) genes based on large-scale time-course count data. Existing methods, however, are suboptimal with respect to power and may lack theoretical justification. Furthermore, most existing tests are designed to distinguish among conditions based on overall differential patterns across time, though in practice, a variety of composite hypotheses are of more scientific interest. Finally, some current methods may fail to control the false discovery rate. In this paper, we propose a new model and testing procedure to address the above issues simultaneously. Specifically, conditional on a latent Gaussian mixture with evolving means, we model the data by negative binomial distributions. Motivated by Storey (2007) and Hwang and Liu (2010), we introduce a general testing framework based on the proposed model and show that the proposed test enjoys the optimality property of maximum average power. The test allows not only identification of traditional DE genes but also testing of a variety of composite hypotheses of biological interest. We establish the identifiability of the proposed model, implement the proposed method via efficient algorithms, and demonstrate its good performance via simulation studies. The procedure reveals interesting biological insights, when applied to data from an experiment that examines the effect of varying light environments on the fundamental physiology of the marine diatom Phaeodactylum tricornutum.     

绵枣儿的开花物候与传粉特性

该文对绵枣儿的开花物候与传粉特性进行了研究,分析了绵枣儿的开花进程、开花物候指数、开花物候指数对其生殖成功的影响,重点探讨了绵枣儿对传粉昆虫的种类及其活动规律。结果表明:(1)绵枣儿始花日期为7月中下旬,单株持续时间15 d左右,种群持续时间30~35 d。呈现出"M"型开花物候曲线,其两年的开花同步指数分别为0.862、0.885,表明开花的年际间差异较小。并且分析出植株的相对开花强度分布在30%~60%之间。(2)相关分析表明:绵枣儿的开花数目与坐果数和持续时间呈现出极显著正相关(P0.01),绵枣儿的持续时间与坐果数之间呈现出显著相关(P0.05),而其始花日期与开花数目、坐果数和持续时间并没有显现出相关性,即绵枣儿植株开花的数目越多,其坐果率越高,持续时间也就越长。(3)绵枣儿的访花昆虫总共有14种,可分属为5目10科。其中传粉昆虫有5科10种。该研究结果表明各传粉昆虫在单花停留的时间和其访花频率上呈现出显著的差异,在日访花频率上也差异明显。     

Demonstration of pollinator‐mediated competition between two native Impatiens species,Impatiens noli‐tangere and I. textori (Balsaminaceae)

Plant–plant interspecific competition via pollinators occurs when the flowering seasons of two or more plant species overlap and the pollinator fauna is shared. Negative sexual interactions between species (reproductive interference) through improper heterospecific pollen transfer have recently been reported between native and invasive species demonstrating pollination‐driven competition. We focused on two native Impatiens species (I. noli‐tangere and I. textori) found in Japan and examined whether pollinator‐mediated plant competition occurs between them. We demonstrate that I. noli‐tangere and I. textori share the same pollination niche (i.e., flowering season, pollinator fauna, and position of pollen on the pollinator's body). In addition, heterospecific pollen grains were deposited on most stigmas of both I. noli‐tangere and I. textori flowers that were situated within 2 m of flowers of the other species resulting in depressed fruit set. Further, by hand‐pollination experiments, we show that when as few as 10% of the pollen grains are heterospecific, fruit set is decreased to less than half in both species. These results show that intensive pollinator‐mediated competition occurs between I. noli‐tangere and I. textori. This study suggests that intensive pollinator‐mediated competition occurs in the wild even when interacting species are both native and not invasive.