Reactive oxygen species and gastric carcinogenesis: The complex interaction between Helicobacter pylori and host

Helicobacter pylori (H. pylori) is a highly successful human pathogen that colonizes stomach in around 50% of the global population. The colonization of bacterium induces an inflammatory response and a substantial rise in the production of reactive oxygen species (ROS) and reactive nitrogen species (RNS), mostly derived from host neutrophils and gastric epithelial cells, which play a crucial role in combating bacterial infections. However, H. pylori has developed various strategies to quench the deleterious effects of ROS, including the production of antioxidant enzymes, antioxidant proteins as well as blocking the generation of oxidants. The host's inability to eliminate H. pylori infection results in persistent ROS production. Notably, excessive ROS can disrupt the intracellular signal transduction and biological processes of the host, incurring chronic inflammation and cellular damage, such as DNA damage, lipid peroxidation, and protein oxidation. Markedly, the sustained inflammatory response and oxidative stress during H. pylori infection are major risk factor for gastric carcinogenesis. In this context, we summarize the literature on H. pylori infection-induced ROS production, the strategies used by H. pylori to counteract the host response, and subsequent host damage and gastric carcinogenesis.     

Influence of nitrogen stress on Isochrysis galbana strain U4, a candidate for biodiesel production

Lipid accumulation has been investigated in numerous microalgal species to assess their potential with respect to biodiesel production. The present work determines the effect of nitrogen stress on physiological and ultrastructural changes in Isochrysis galbana U4. This study is unique in showing the correlations between growth, lipid production, pigmentation and ultrastructural changes in Isochrysis cells undergoing nitrogen starvation. The continuation of algal growth after the complete depletion of external nitrogen was shown to be supported by internal nitrogen stores, possibly in the pyrenoid. Cell growth ceased and lipid accumulation was initiated after the internal store of nitrogen had become exhausted. The depletion of intracellular nitrogen reservoirs to critical thresholds initiated the onset of the stationary phase, a decline in chlorophyll content and the initiation of lipid and carotenoid accumulation. The most notable ultrastructural changes, upon nitrogen stress, were the accumulation of plastidial and cytoplasmic lipid bodies and the dismantling of the chloroplast. The size of the pyrenoid when external nitrogen became depleted was found to decrease significantly, up to four‐fold. This was attributed to the remobilization of nitrogen from Rubisco. The level of expression of heterochromatin was found to increase when cells were nitrogen starved. This is thought to favor long‐term dormancy in this species because aging cells have been noted to recover rapidly when returned to conditions favorable for growth. The observations of this study are consistent with the hypothesis that the responses of Isochrysis cells to nitrogen starvation are regulated by the internal reserves of nitrogen, and the depletion of these reserves is an important trigger for lipid accumulation in this species. The findings of this study also indicate that Isochrysis galbana U4 is a promising candidate for biodiesel lipid production.     

Detecting distant relatives of mammalian LPS-binding and lipid transport proteins.

In mammals, a family of four lipid binding proteins has been previously defined that includes two lipopolysaccharide binding proteins and two lipid transfer proteins. The first member of this family to have its three-dimensional structure determined is bactericidal/permeability-increasing protein (BPI). Using both the sequence and structure of BPI, along with recently developed sequence-sequence and sequence-structure similarity search methods, we have identified 13 distant members of the family in a diverse set of eukaryotes, including rat, chicken, Caenorhabditis elegans, and Biomphalaria galbrata. Although the sequence similarity between these 13 new members and any of the 4 original members of the BPI family is well below the "twilight zone," their high sequence-structure compatibility with BPI indicates they are likely to share its fold. These findings broaden the BPI family to include a member found in retina and brain, and suggest that a primitive member may have contained only one of the two similar domains of BPI.     

Temporal variation in body composition (C : N) helps explain seasonal patterns of zooplankton δ13C

1. The stable carbon isotope ratio δ¹³C is a useful tracer of energy flow in lake food webs, and the zooplankton signature is commonly used to establish a baseline for the pelagic habitat. However, sources of temporal variability in the δ¹³C of different zooplankton taxa are rarely considered. 2. Here, we investigate to what extent temporal variation in the δ¹³C of particulate organic matter (POM) (<41 μm) and the C : N of zooplankton can explain the temporal variability in δ¹³C of freshwater zooplankton. We compare temporal patterns of δ¹³C and C : N for Daphnia, Hesperodiaptomus franciscanus and Leptodiaptomus tyrelli over a 6‐month period at four sites in two oligotrophic lakes. 3. In all three taxa, seasonal variation in zooplankton C : N explained more of the variation in zooplankton δ¹³C than did the δ¹³C of POM. This suggests that variation in the lipid content of zooplankton can strongly influence temporal variation of δ¹³C in zooplankton. 4. Using these data, we evaluate procedures that estimate the δ¹³C of only the non‐lipid component of zooplankton. If zooplankton lipids are primarily dietary in origin, than extracting lipids or ‘normalising’δ¹³C based on C : N will exclude a major dietary source, and therefore may be inappropriate. 5. We conclude that temporal variation in body composition (C : N) of zooplankton can significantly influence the temporal variation of zooplankton δ¹³C signatures.     

Characterization of Alpine highland pastures located at different altitudes: forage evaluation,chemical composition,in vitro digestibility,fatty acid,and terpene contents

A survey was conducted over the summer of 2013 on two alpine pastures (P1 and P5), and three mountain pastures (P2, P3, and P4). The aim was to determine the botanical composition, pastoral value (PV), variation in chemical composition, gross energy, in vitro true digestibility (IVTD), in vitro indigestible neutral detergent fiber, fatty acid (FA), and terpene contents of pastures located at different altitudes. PV is highest in alpine pastures (25.7 and 26.9, for P1 and P5, respectively). Exploitation of pastures is intensive only for P1 and P2. Pastures differ in dry matter (DM), ash, crude protein, lipid, and gross energy content. Lignin content was significantly higher in P3 (125 g/kg DM), while in other pastures the variation in its average content (from 73 to 94 g/kg DM) was limited. All pastures had IVTD higher than 725 g/kg with the exception of P3 (659 g/kg). As far as FA content is concerned, in all pastures the most abundant were α-linolenic acid (from 495 to 583 g/kg of total FA) and linoleic acid (from 150 to 222 g/kg of total FA), while palmitic acid and oleic acid significantly differ among pastures. α-Pinene, β-pinene, and p-cymene were the most abundant terpenoids.