Relations between carbon dioxide fluxes and environmental factors of Kobresia humilis meadows and Potentilla fruticosa meadows

Carbon dioxide fluxes of Kobresia humilis and Potentillafruticosa shrub meadows,two typical ecosystems in the Qinghai-Tibet Plateau,were measured by eddy covariance technology and the data collected in August 2003 were employed to analyze the relations between carbon dioxide fluxes and environmental factors of the ecosystems.August is the time when the two ecosystems reach their peak leaf area indexes and stay stable,and also the period when the net carbon absorptions of Kobresia humilis and Potentilla photo flux densities (PPFD),the carbon dioxide-uptake rate of the Kobresia humilis meadow is higher than that of the Potentilla fruticosa shrub meadow;where the PPFD are rates of the two ecosystems declined as air temperature increased,but the carbon dioxide uptake rate of the Kobresia humilis meadow decreased more quickly (-0.086) than that of the Potentilla fruticosa shrub meadow (-0.016).Soil moistures exert influence on the soil respirations and this varies with the vegetation type.The daily carbon dioxide absorptions of the ecosystems increase with increased diurnal temperature differences and higher diurnal temperature differences result in higher carbon dioxide exchanges.There exists a negative correlation between the vegetation albedos and the carbon dioxide fluxes.     

Application of pulsed light technology for fruits and vegetables disinfection: A review

Non-thermal technologies can maintain fruit and vegetable products quality better than traditional thermal processing. Pulsed light (PL) is a non-thermal method for microbial inactivation (vegetative cells and spores) in fruits and vegetables. The PL treatment involves the application of intense and short-duration pulses of broad spectrum wavelengths ranging from UV to near-infrared (100–1100 nm). This review summarized application of PL technology to control microbial contamination and increasing shelf-life of some fruits and vegetables including apple, blueberries, grape, orange, strawberries, carrot, lettuce, spinach, and tomato. The microbial inactivation in very short treatment times, low energy used by this system, flexibility for solid or liquid samples, few residual compounds and no synthetic chemicals that cause environmental pollution or harm humans, is benefits of PL technique. The efficiency of PL disinfection is closely associated with the input voltage, fluence (energy dose), composition of the emitted light spectrum, number of lamps, the distance between samples and light source, and frequency and number of applied pulses. The PL treatments control pathogenic and spoilage microorganisms, so it facilitates the growth and development of the starter microorganisms affecting product quality.     

Analytical comparison of absolute quantification strategies to investigate the insulin signaling pathway in fat cells

So far, mass spectrometry-based targeted proteomics is the most sensitive approach to answer and address specific biological questions in an accurate and quantitative fashion. However, the data analysis design used for such quantification varies in the field leading to discrepancies in the reported values. In this study, different quantification strategies based on calibration curves were evaluated and compared. The best accuracy and coefficient of variation was achieved by ratio to ratio calibration curves. We applied the ratio to ratio quantification approach to analyze very low abundant insulin signaling proteins such as PIK3RA (0.10–0.93 fmol/μg), AKT1 (0.1–0.39 fmol/μg), and the insulin receptor (0.22–2.62 fmol/μg) in a fat cell model and demonstrated the adaptation of this pathway at different states of insulin sensitivity.     

干细胞与再生医学技术发展态势研究

20世纪以来,干细胞与再生医学技术一直是国际生物医学领域的热点前沿之一,它为保障人类生命健康、改善人类生存质量和延长人类寿命发挥不可替代的巨大作用。因此,美国、欧洲国家、日本和中国等科技大国均将该领域纳入了国家科研与产业发展的重点战略中,并通过专项扶持、政策补贴、立法保障等方式激励该领域的创新发展。通过对近年来国际科技战略和科技研发态势的梳理分析,发现该领域的国际战略布局规律,揭示我国在该领域的领先优势与弱点,为我国未来干细胞与再生医学技术发展提出相关参考建议。     

Comprehensive analysis of lncRNA–miRNA–mRNA during proliferative phase of rat liver regeneration

This study aims to reveal the regulatory mechanism of lncRNAs–miRNAs–mRNAs network during the proliferative phase of liver regeneration (LR). High-throughput sequencing technology was performed, and a total of 1,738 differentially expressed lncRNAs (DE lncRNAs), 167 known differentially expressed miRNAs (DE miRNAs), and 2,727 differentially expressed mRNAs were identified. Then, the target DE lncRNAs and DE mRNAs regulated by the same miRNAs were screened and a ceRNA regulatory network containing 32 miRNAs, 107 lncRNAs, and 270 mRNAs was constructed. Insulin signaling pathway, pyrimidine metabolism, axon guidance, carbohydrate digestion and absorption, and pyruvate metabolism were significantly enriched in the network. Through literature review and the regulatory relationship between lncRNAs and miRNAs, nine core lncRNAs were identified, which might play important roles during the proliferative phase of rat LR. This study analyzed lncRNA–miRNA–mRNA regulatory network for the first time during the proliferative phase of rat LR, providing clues for exploring the mechanism of LR and the treatment of liver diseases.     

Signification des technologies bifaciales au Paléolithique moyen des montagnes de l’Altaï

Previously the single bifacial tools found in different industrial variants of the Altai Middle Paleolithic (Sibiryachikha and Kara-bom) were not considered to be cultural markers that could be used to differentiate the technological/cultural variants, but rather a bright, but situational manifestation of the typological variability, especially in the case of the Sibiryachika assemblages. As a result of recent studies of Chagyrskaya Cave, the key-site of Sibiryachikha, it was found that all the bifaces are made using plano-convex technology. In the Chagyrskaya Cave assemblage all stages of bifacial production have been found: pre-forms, bifacial tools and tools made on the bifacial thinning flakes, accompanied by numerous bifacial thinning flakes and bifacial thinning chips. A preliminary study of the bifaces from the second Sibiryachikha site, Okladnikov Cave evidenced the use of the same plano-convex technology. On the other hand, in the Kara-bom complexes (Kara-Bom, Ust-Karakol-1, Anuy-3), all bifacial tools are made using bi-convex bifacial technology. Thus, the criteria for the technological distinction of bifacial production assume special importance as a cultural marker that allows the differentiation the Altai Middle Paleolithic technological variants. Taking into account the fact that Chagyrskaya Cave and Okladnikov Cave are associated only with Neanderthal remains, it can be assumed that bifacial plano-convexe technology in the Middle Paleolithic of Altai is linked to the appearance and existence of their population in the region.     

Breakpoint mapping of a novel de novo translocation t(X;20)(q11.1;p13) by positional cloning and long read sequencing

Disease associated chromosomal rearrangements often have break points located within disease causing genes or in their vicinity. The purpose of this study is to characterize a balanced reciprocal translocation in a girl with intellectual disability and seizures by positional cloning and whole genome sequencing. The translocation was identification by G- banding and confirmed by WCP FISH. Fine mapping using BAC clones and whole genome sequencing using Oxford nanopore long read sequencing technology for a 1.46 X coverage of the genome was done. The positional cloning showed split signals with BAC RP11-943 J20. Long read sequencing analysis of chimeric reads carrying parts of chromosomes X and 20 helped to identify the breakpoints to be in intron 2 of ARHGEF9 gene on Xp11.1 and on 20p13 between RASSF2 and SLC23A2 genes. This is the first report of translocation which successfully delineated to single base resolution using Nanopore sequencing. The genotype-phenotype correlation is discussed.     

国家人勇担国家责，积极推动中国生物经济与生物产业发展

作为国家级研究机构,中国科学院各级研究所一直以来的重要使命就是心系国家事、肩扛国家责、永做国家人,站在国际科学发展前沿的高度,紧抓国家社会发展中重大需求的科学与技术问题,布局研究所及其项目和吸引人才。本文以个人视角,回顾了2004年回国接任微生物研究所所长后,开始思考工业生物技术的发展,布局天津研发中心,经过多年努力,在院党组的领导与支持下,中国科学院天津工业生物技术研究所建成,已经取得了重要成果;还回顾了建所初衷和早期成长发展历程以及与微生物研究所的关系。通过思考科学、技术、工程(医学)之间的关系,提出从事基础科学研究的科研人员进行转化应用的路径,即“想法-假说-实验-概念-论文-技术-样品-产品-商品”的9层逻辑关系,希望科学家能够做出解决实际问题的实用工作,并展望了未来工业生物技术的远景。     

高茶氨酸茶树新品系‘福黄2号’黄化变异机理

为了探讨茶树黄化变异和高茶氨酸形成机理,文中选用‘福云6号’和高茶氨酸茶树新品系‘福黄2号’为试验材料,利用超微电镜、广泛靶向代谢组学、靶向代谢组学和转录组学联合分析了茶树黄化变异的相关色素、代谢组及转录组数据。结果表明,通过靶向测定主要生化成分,共鉴定到5种儿茶素、可可碱和咖啡碱,以及20种游离氨基酸,包括茶氨酸、谷氨酰胺、精氨酸和谷氨酸等,其中,‘福黄2号’的氨基酸含量显著高于‘福云6号’,茶氨酸含量高达57.37 mg/g。叶片的超微结构显示,‘福黄2号’叶绿体细胞结构模糊,基粒片层大部分排列散乱、间隙大,类囊体呈丝状。色素测定显示,叶绿素a和叶绿素b、类胡萝卜素、类黄酮等色素含量显著下降,叶绿素酶（chlorophyllase,CLH）、9-顺式-环氧类胡萝卜素双加氧酶（9-cis-epoxycarotenoid dioxygenase,NCED）、类黄酮3β-羟化酶（flavonoid 3β-hydroxylase,F3H）和类黄酮3'',5''-羟化酶（flavonoid 3'',5''-hydroxylase,F3''5''H）等相关关键调控基因发生显著变化。与‘福云6号’相比,‘福黄2号’中共鉴定出138个差异代谢物（significantly changed metabolites,SCMs）和658个差异表达基因（differentially expressed genes,DEGs）,KEGG富集分析表明,SCMs和DEGs显著富集到与氨基酸生物合成、谷胱甘肽代谢以及三羧酸循环等途径。‘福黄2号’黄化表型可能是光合作用蛋白、叶绿素代谢基因和叶绿素含量的缺乏所致。高茶氨酸的积累可能由于黄化叶中低氮消耗,以及碳骨架的缺乏,氨基和氮资源被更有效地储存,使得氨基酸合成通路中的代谢物及相关基因表达上调,茶氨酸成为黄化叶中显著积累的含氮化合物。     

Patented Biologically-inspired Technological Innovations： A Twenty Year View

1 Introduction Biomimetics or bionics is having an increasing role in innovation[1]. It offers the promise of novel routes to technological innovation; a recent paper highlighted the potential of studies of biological systems to initiate patents in the engineering sciences and technology[2]. Media coverage, particularly in business periodicals is increasing, for example, The Economist recently re- ported on the growth of biomimetics and its impact on technology[3]. There are two principal rou…