N : P stoichiometry and protein : RNA ratios in vascular plants: an evaluation of the growth-rate hypothesis

The growth-rate hypothesis states that fast-growing organisms need relatively more phosphorus-rich RNA to support rapid rates of protein synthesis, and therefore predicts, within and among taxa, increases in RNA and phosphorus content (relative to protein and nitrogen content) with increased growth rate. Here, we present a test of this hypothesis in vascular plants. We determined nitrogen : phosphorus ratios and protein : RNA ratios in pines growing at different rates due to nutrient conditions. In general, when comparing leaves of the same species at low and high growth rates, the faster-growing plants had higher RNA content, higher %N and %P, and lower protein : RNA ratios, but not consistently lower N : P ratios. We found no link between growth rate and foliar N : P or protein : RNA when comparing multiple species of different inherent growth rates. We conclude that plants adjust the balance of protein and RNA to favour either speed or efficiency of protein synthesis, but this balance does not alone dictate leaf stoichiometry.     

Global trends in senesced-leaf nitrogen and phosphorus

Aim Senesced‐leaf litter plays an important role in the functioning of terrestrial ecosystems. While green‐leaf nutrients have been reported to be affected by climatic factors at the global scale, the global patterns of senesced‐leaf nutrients are not well understood. Location Global. Methods Here, bringing together a global dataset of senesced‐leaf N and P spanning 1253 observations and 638 plant species at 365 sites and of associated mean climatic indices, we describe the world‐wide trends in senesced‐leaf N and P and their stoichiometric ratios. Results Concentration of senesced‐leaf N was highest in tropical forests, intermediate in boreal, temperate, and mediterranean forests and grasslands, and lowest in tundra, whereas P concentration was highest in grasslands, lowest in tropical forests and intermediate in other ecosystems. Tropical forests had the highest N : P and C : P ratios in senesced leaves. When all data were pooled, N concentration significantly increased, but senesced‐leaf P concentration decreased with increasing mean annual temperature (MAT) and mean annual precipitation (MAP). The N : P and C : P ratios also increased with MAT and MAP, but C : N ratios decreased. Plant functional type (PFT), i.e. life‐form (grass, herb, shrub or tree), phylogeny (angiosperm versus gymnosperm) and leaf habit (deciduous versus evergreen), affected senesced‐leaf N, P, N : P, C : N and C : P with a ranking of senesced‐leaf N from high to low: forbs ≈ shrubs ≈ trees > grasses, while the ranking of P was forbs ≈ shrubs ≈ trees < grasses. The climatic trends of senesced‐leaf N and P and their stoichiometric ratios were similar between PFTs. Main conclusions Globally, senesced‐leaf N and P concentrations differed among ecosystem types, from tropical forest to tundra. Differences were significantly related to global climate variables such as MAT and MAP and also related to plant functional types. These results at the global scale suggest that nutrient feedback to soil through leaf senescence depends on both the climatic conditions and the plant composition of an ecosystem.     

太湖典型菜地土壤氮磷向水体径流输出与生态草带拦截控制

农业面源氮磷输出是导致太湖流域地表水富营养化主要原因之一,查明该地区农田土壤地表径流氮磷向水体迁移形态与通量,并实施径流控制,对水体富营养化治理具有重要现实意义。蔬菜地是太湖流域重要的农业种植方式。通过设置野外径流小区,观测了春夏季蔬菜地土壤氮磷径流输出,并探讨了生态拦截草带对径流中不同形态氮磷拦截效果。结果表明,2004年10月25日至2005年8月17日,菜地土壤氮磷径流输出总量分别为3 010.9和695.0 g.hm-2;其中颗粒态为主,分别占64%和75%。可溶态氮中,NH4 -N为主,占50%,可溶态磷中H2PO4-为主,占87%。生态拦截草带对径流氮和磷拦截效率分别为42%~91%,30%~92%。生态草带对颗粒态氮磷拦截效率大于可溶态。拦截草带可有效地控制蔬菜地土壤氮、磷通过径流向水体迁移。     

Rapid changes in fish community structure and habitat distribution following the precipitation of lake phosphorus with aluminium

1. Fish community structure and habitat distribution of the abundant species roach, perch and ruffe were studied in Lake Nordborg (Denmark) before (August 2006) and after (August 2007) aluminium treatment to reduce internal phosphorus loading. 2. Rapid changes in fish community structure, abundance and habitat distribution occurred following a decline in in‐lake phosphorus concentrations from 280 to 37 μg P L^?1 and an increase in Secchi depth transparency from 1.1 to 1.9 m (August). The proportion of perch in overnight gill net catches increased, whilst roach decreased, and the average weight of all key species increased. 3. The habitat distribution of perch and roach changed from a high proportion in the upper pelagic and littoral zones in 2006, towards enhanced proportions in the deeper pelagic and profundal zone in 2007. The abundance of large‐bodied zooplankton increased and the abundance of benthic invertebrates decreased in the same period, suggesting that the habitat shift was not induced by food limitation. 4. Ruffe shifted from the littoral and upper profundal zones towards the deep profundal zone, likely reflecting an increased predation risk in the littoral zone and better oxygen conditions in the deep profundal. 5. Our results indicate that enhanced risk of predation in the upper pelagic and the littoral zones and perhaps improved oxygen concentrations in the deeper profundal zone at decreasing turbidity are responsible for the observed habitat shift. The results indicate that fish respond rapidly to changes in nutrient state, both in terms of community structure and habitat use.     

The effect of Stratiotes aloides L. and nutrients on the growth rate of Lemna minor L.

We tried to find the reasons for frequently observed low biomass of Lemna minor among floating rosettes of Stratiotes aloides as opposed to the abundance of Spirodela polyrhiza in these stands. The effect of S. aloides on L. minor was analysed in outdoor culture experiments. The duckweed collected from among dense stands of the floating form of S. aloides (test sites) showed a significantly lower growth rate than that from stands free of the water soldier (control sites). Water from the latter stands was significantly richer in nitrate-nitrogen and ammonium-nitrogen, but not in soluble reactive phosphorus suggesting possible nutrient depletion as a reason for observed differences. Growth rates of L. minor were indeed significantly correlated with in situ concentrations of all dissolved nutrients and showed saturation at around 0.18 mg N-NH₄ dm⁻³ and 0.05 mg SRP dm⁻³ above which the growth rates did not increase significantly. We used stepwise regression to test the combined effect of nutrients and the presence/absence of S. aloides on the growth rate of L. minor. The regression showed a negligible effect of ammonium ions and nitrates on the growth rate of the duckweed. At low concentrations of soluble reactive phosphorus the presence of both the S. aloides and SRP concentrations significantly affected the growth of L. minor. Above saturating SRP concentrations none of the two effects was significant. Results of our experiments seem to suggest that the presence of S. aloides exerts a negative effect on the growth of L. minor only at low concentrations of soluble phosphorus. Since the depletion of nutrients in water by the floating form of S. aloides is unlikely, we point to S. polyrhiza as a superior competitor for nutrients and suggest a possible allelopathic effect of the water soldier on L. minor.     

QTL analysis of root traits as related to phosphorus efficiency in soybean

Background and Aims

Low phosphorus (P) availability is a major constraint to soybean growth and production, especially in tropical and subtropical areas. Root traits have been shown to play critical roles in P efficiency in crops. Identification of the quantitative trait loci (QTLs) conferring superior root systems could significantly enhance genetic improvement in soybean P efficiency.

Methods

A population of 106 F₉ recombinant inbred lines (RILs) derived from a cross between BD2 and BX10, which contrast in both P efficiency and root architecture, was used for mapping and QTL analysis. Twelve traits were examined in acid soils. A linkage map was constructed using 296 simple sequence repeat (SSR) markers with the Kosambi function, and the QTLs associated with these traits were detected by composite interval mapping and multiple-QTL mapping.

Key Results

The first soybean genetic map based on field data from parental genotypes contrasting both in P efficiency and root architecture was constructed. Thirty-one putative QTLs were detected on five linkage groups, with corresponding contribution ratios of 9·1–31·1 %. Thirteen putative QTLs were found for root traits, five for P content, five for biomass and five for yield traits. Three clusters of QTLs associated with the traits for root and P efficiency at low P were located on the B1 linkage group close to SSR markers Satt519 and Satt519-Sat_128, and on the D2 group close to Satt458; and one cluster was on the B1 linkage group close to Satt519 at high P.

Conclusions

Most root traits in soybean were conditioned by more than two minor QTLs. The region closer to Satt519 on the B1 linkage group might have great potential for future genetic improvement for soybean P efficiency through root selection.     

Thermal-induced conformational changes in the product release area drive the enzymatic activity of xylanases 10B: Crystal structure, conformational stability and functional characterization of the xylanase 10B from Thermotoga petrophila RKU-1

Recent studies have demonstrated that tocotrienol (T3) is superior to tocopherol (Toc) for cancer chemoprevention. However, there is little information on whether Toc influences the anticancer property of T3. In this study, we investigated the influence of Toc on the cytotoxic effects of δ-T3 in DLD-1 human colorectal adenocarcinoma cells. Toc, especially α-Toc, attenuated δ-T3-induced cytotoxicity and apoptosis in DLD-1 cells, whereas Toc alone did not exhibit any cytotoxic effect. δ-T3-induced cell cycle arrest and proapoptotic gene/protein expression (e.g., p21, p27, and caspases) were abrogated by α-Toc. Furthermore, coadministration of α-Toc decreased δ-T3 uptake into DLD-1 cells in a dose-dependent manner. These results indicate that α-Toc is not only less cytotoxic to cancer cells, but it also reduces the cytotoxicity of δ-T3 by inhibiting its cellular uptake.     

Vitamin E as a novel enhancer of macroautophagy in rat hepatocytes and H4-II-E cells

Autophagy is an intracellular bulk degradation process induced by nutrient starvation, and contributes to macromolecular turnover and rejuvenation of cellular organelles. We demonstrated that vitamin E was a novel nutritional enhancer of autophagy in freshly isolated rat hepatocytes and rat hepatoma H4-II-E cells. Supplementation of fresh hepatocytes with vitamin E (up to 100 μM) increased proteolysis significantly in the presence or absence of amino acids in a dose-dependent manner. The cytosolic LC3 ratio, a newly established index of autophagic flux, was significantly increased by vitamin E, strongly suggesting that the possible site of action is the LC3 conversion step, an early step in autophagosome formation. A typical antioxidant, α-lipoic acid, exerted autophagy suppression, while H₂O₂ stimulated autophagy. It is conceivable that autophagy was stimulated by oxidative stress and this stimulation was cancelled by cellular antioxidative effects. However, in our studies, vitamin E could have enhanced autophagy over-stimulation by H₂O₂, rather than suppress it. From these results, using a new cytosolic LC3 ratio, vitamin E increases autophagy by accelerating LC3 conversion through a new signaling pathway, emerging as a novel enhancer of autophagy.     

Photoautotrophic nutrient utilization and limitation during semi‐continuous growth of Synechocystis sp. PCC6803

Microbial photosynthesis presents a valuable opportunity to capture abundant light energy to produce renewable bioenergy and biomaterials. To understand the factors that control the productivity of photosynthetic microorganisms, we conducted a series of semi‐continuous experiments using bench‐scale photobioreactor (PBR) systems, the cyanobacterium Synechocystis PCC6803 (PCC6803), and light conditions imitating actual day–night light irradiance (LI). Our results demonstrate that using normal BG‐11 medium resulted in severe phosphate (P_i) limitation for continuous operation. Mitigation of P_i‐limitation, by augmenting the P_i content of BG‐11, allowed higher biomass productivity; however, once P_i‐limitation was alleviated, limitation by inorganic carbon (C_i) or LI occurred. C_i‐limitation was detected by a low total C_i concentration (<5 mg C/L) and high and fluctuating pH. C_i‐limitation was relieved by delivering more CO₂, which led to a stable pH in the range of 7–9 and at least 5 mg/L of C_i in HCO. LI limitation, evidenced by an average LI <14 W/m² for PCC6803, was induced by a high biomass concentration of 1,300 mg/L. Thus, this work provides quantitative tools of stoichiometry and kinetics to evaluate limitation on PBRs. Biotechnol. Bioeng. 2010;106: 553–563. © 2010 Wiley Periodicals, Inc.     

Why is Abundance of Herbaceous Legumes Low in African Savanna? A Test with Two Model Species

Although fire is frequent in African savanna ecosystems and may cause considerable loss of nitrogen (N), N₂-fixing herbaceous legumes—which could be expected to benefit from low N conditions—are usually not abundant. To investigate possible reasons for this scarcity, we conducted a pot experiment using two common plants of humid African savannas as model species, the legume Cassia mimosoides and the C₄ grass Hyperthelia dissoluta. These species were grown at different levels of water, N and phosphorus (P), both in monoculture and in competition with each other. In the monocultures, yields were significantly increased by the combined addition of N and P in pots receiving high water supply. In pots with interspecific competition, the legume grew poorly unless P was added. Foliar δ¹⁵N values of legume plants grown in mixtures were considerably lower than those in monocultures, suggesting that rates of symbiotic N-fixation were higher in the presence of the grass. Grass δ¹⁵N values, however, were also lower in mixtures, while N concentrations were higher, indicating a rapid transfer of N from the legume to the grass. We conclude that the main reason for the low abundance of C. mimosoides is not low P availability as such, but a greater ability of H. dissoluta to compete for soil N and P, and a much higher N-use efficiency. If other C₄ grasses have a similar competitive advantage, it could explain why herbaceous legumes are generally sparse in African savannas. We encourage others to test these findings using species from other types of savanna vegetation.