化感水稻根际微生物类群及酶活性变化

以化感水稻PI312777（PI）和非化感水稻Lemont（LE）为材料,分别测定不同水稻叶龄期（3～7叶期）根际微生物区系变化及根际土壤酶活性.结果表明,化感水稻明显影响土壤根际微生物类群及相关酶活性.化感水稻PI根际细菌、放线菌、固氮菌的数量高于非化感水稻LE,增幅分别在11.2%～28.3%、40%～78.6%和111.5%～173.9%之间,而真菌数量低于非化感水稻LE,最高仅为其值的25.5％,说明化感水稻PI对绝大多数细菌、放线菌、固氮菌生长有促进作用,对一些真菌生长有抑制作用.进一步分析表明,化感水稻PI对氨化细菌、亚硝酸细菌、硝酸细菌、好气性固氮菌、好气性纤维素分解菌、硫化细菌的生长具有促进作用,其中以氨化细菌、好气性固氮菌的更为明显,最低增幅分别为53.7％和57.6％;而对反硫化细菌、反硝化细菌生长有抑制作用,其值最高分别为非化感水稻的54.2％和50.6％.此外,化感水稻PI根系分泌物对脲酶、磷酸酶、蔗糖酶的活性具有促进作用,而对过氧化氢酶则呈抑制作用.     

辽河铁岭段水生生物和微生物状况、评价及变化趋势

以2003年至2007年辽河铁岭段水生生物浮游植物、微生物监测数据为基础,应用Shannon-Wiener多样性指数法和Kolkwitz-Marsson污水生物系统法等生物学指标分析方法,分析辽河铁岭段水质状况,评价水质质量,划分水质污染等级,得出水质变化趋势。     

密云水库不同季节细菌群落多样性

为加强对密云水库水体状况的全面了解,对2006年11月到2007年11月不同季节水体中的微生物进行了研究.用流式细胞仪技术和LB固体培养基培养测定了水体中的细菌数目;利用PCR-DGGE技术对水体细菌的多样性和相似性进行分析.结果表明,细菌数目随季节变化有所不同,但利用流式细胞仪测定的每毫升水体细菌的数目基本上均为104数量级,而培养得到的细菌菌落数为102～103 CFU/ml,基本符合国家饮用水源的卫生标准.细菌的多样性指数也表现出随季节变化的规律,冬季(2006-11和2007-11)Shannon-Weaver多样性指数较低,为3.0左右;春季(2007-04)开始增大,至夏季(2007-07)时可高达3.3068;秋季(2007-09)又减小到3.1246.另外,密云水库细菌的优势类群有β-Proteobacteria、Actinobacteria、Cytophaga/Flexibacter/Bacteroides (CFB) 类群和Cyanobacteria. 这些资料有望为以后进一步从微生物角度评价水质提供参考.     

新疆石河子地区甜樱桃采后腐烂致病真菌的分离鉴定

【背景】甜樱桃果实柔软多汁,采后腐烂率高。石河子是新疆新兴的甜樱桃种植地区之一,但由于采后储运不当造成巨大的经济损失。【目的】鉴定石河子地区的甜樱桃果实腐烂病原菌,以期提高该地区甜樱桃的采后品质、延长货架期。【方法】从石河子136团种植的甜樱桃腐坏组织中分离真菌菌株,根据柯赫氏法则将分离得到的菌株重新接种到健康的甜樱桃果实上确定其致病性;结合形态学和真菌核糖体转录间隔区(r DNA-ITS)序列分析对致病真菌进行鉴定。【结果】从石河子地区甜樱桃腐烂的果肉中分离出5类丝状真菌,其中3类是甜樱桃果实的致病真菌,转录间隔区序列比对确定3类真菌中代表菌株分别为易脆毛霉(Mucorfragilis)、镰刀菌(Fusariumsp.)和干酪青霉(Penicillium camemberti)。【结论】导致新疆石河子地区甜樱桃果实腐烂的致病真菌主要有易脆毛霉(Mucor fragilis)、镰刀菌(Fusarium sp.)和干酪青霉(Penicillium camemberti)。     

Differential selection pressure exerted by root rot disease on the microbial communities in the rhizosphere of avocado (Persea americana Mill.)

Despite the high economic impact of root rot disease, knowledge regarding the rhizosphere microflora of avocado trees affected by root rot is limited. Metagenomics was applied to identify the difference in the rhizosphere microflora of avocado trees with and without visible symptoms of root rot. Approximately, 446,970 common gene catalogues differed between them, confirming that root rot affected the bacterial and fungal communities in the rhizosphere. The proportion of bacterial genera, namely, Labilithrix, Sorangium, Sandaracinus and Pedosphaera showed a decrease while Phenylobacterium, Rhizomicrobium, Candidatus Solibacter and Silvibacterium genera were increased by root rot. The proportion of fungal genera, namely, Pseudogymnoascus, Moelleriella, Mortierella, Lepidopterella, Babjeviella, Lachancea, Macrophomina, Pneumocystis, Sugiyamaella and Cyphellophora showed an increase while Cryptococcus, Verticillium, Bipolaris, Pyrenochaeta, Rhizophagus, Cenococcum and Neonectria genera were inhibited by root rot. Moreover, the proportion of the top 10 bacteria in the rhizosphere of symptomatic trees was significantly higher, and that of the top 10 fungi was significantly lower, compared to the asymptomatic trees. Principal component analysis based on abundance analysis and function prediction showed that in symptomatic trees, the bacterial community was more concentrated, while the fungal community was more dispersed. The differences in the responses of bacterial and fungal genera suggested that the pathogenic fungi exert varying selection pressure on the microflora. Moreover, root rot affected the metabolism of carbohydrates, lipids and amino acids in bacteria, and the global and overview maps, carbon metabolism and processing of genetic and environmental information in fungi, which might result in differential selection pressure.     

影响人肠道微生物菌群结构的因素

肠道微生物与人类健康状况直接相关。目前,微生物研究者已对影响人及模式动物(主要为鼠和猪)肠道微生物菌群结构的因素展开了广泛研究,取得了较大研究进展。本文综述了影响肠道微生物菌群结构的因素,主要有年龄、宿主基因型、宿主所处环境、食物和抗生素等,以使人们了解和控制这些因素,从而保持良好的健康状态。     

改革教学内容，促进高职院校食品营养与检测专业食品微生物检验能力的培养

基于课程内容是课程的核心要素,分析高职院校针对食品营养与检测专业学生食品微生物检验能力培养的教学及教学内容改革中存在的问题;结合行业的实际要求和职业标准,阐述教学内容改革的必要性、迫切性和教学内容应涵盖哪些具体内容,重在食品微生物学检验教学内容的构建,目的是促进学生食品微生物检验能力的培养。实践证明,此教学内容的全面改革能够达到上述培养目的。     

氮磷添加和栽植密度对大叶相思林土壤微生物群落功能多样性的影响

土壤微生物群落是土壤质量潜在的生态指标,在维持生态系统功能和服务中起着关键的作用。采用Biolog-ECO微平板法,探讨氮磷添加与不同栽植密度交互对大叶相思林(Acacia auriculiformis)土壤微生物功能多样性的影响,以便为建立合理的林分密度和氮磷施肥模式,提高土壤质量提供理论参考。以大叶相思林为研究对象,选择氯化铵(NH4Cl)作为氮肥模拟大气氮沉降,用二水合磷酸二氢钠(NaH2PO4·2H2O)进行磷添加。氮磷处理设置4个水平,即CK、施N、施P和施N+P。种植密度设置4个水平,即1667、2500、4444、10000株/hm²(分别以低密度、中密度、较高密度、高密度表示)。研究结果表明,施P显著提高了4个密度大叶相思林土壤微生物的AWCD值、碳源利用丰富度指数、McIntosh指数、Shannon指数和Simpson指数,而施N和N+P则相反。随着林分密度的减小,各处理的土壤微生物AWCD值趋于减少。通常低密度林分的土壤微生物的丰富度指数、Shannon-Wiener指数、McIntosh指数和Simpson指数较小。     

原位核酸杂交检测宫颈癌中金黄色葡萄球菌L型DNA

应用病原微生物培养、改良革兰氏染色、免疫组化染色及原位核酸杂交等方法,对５０例宫颈癌和３３例慢性宫颈炎进行了研究。结果发现宫颈癌病原微生物培养细菌及其Ｌ型阳性感染率为５８％（２９／５０例）,以金黄色葡萄球菌（金葡菌）及其Ｌ型多见（１３／２９例）;宫颈癌和慢性宫颈炎组织切片革兰氏染色,细菌Ｌ型检出率分别为６６％和４５．５％;免疫组化染色（ＡＢＣ法）金葡菌Ｌ型抗原阳性率各为６８％和４８．５％。Ｌ型主要分布于癌间质、癌巢及宫颈上皮下结缔组织内。１２例宫颈癌金葡菌Ｌ型ＤＮＡ探针原位杂交显示,１０／１２例癌细胞核内有金葡菌Ｌ型ＤＮＡ杂交阳性信号,表明金葡菌Ｌ型ＤＮＡ已进入宫颈癌细胞内,可能会在基因水平上影响宫颈上皮恶变,提示宫颈癌发生与金葡菌Ｌ型感染关系密切,值得进一步研究。     

Structural and Biochemical Analysis of Human Pathogenic Astrovirus Serine Protease at 2.0 Å Resolution

Astroviruses are single-stranded RNA viruses with a replication strategy based on the proteolytic processing of a polyprotein precursor and subsequent release of the viral enzymes of replication. So far, the catalytic properties of the astrovirus protease as well as its structure have remained uncharacterized. In this study, the three-dimensional crystal structure of the predicted protease of human pathogenic astrovirus has been solved to 2.0 Å resolution. The protein displays the typical properties of trypsin-like enzymes but also several characteristic features: (i) a catalytic Asp-His-Ser triad in which the aspartate side chain is oriented away from the histidine, being replaced by a water molecule; (ii) a non-common conformation and composition of the S1 pocket; and (iii) the lack of the typical surface β-ribbons together with a “featureless” shape of the substrate-binding site. Hydrolytic activity assays indicate that the S1 pocket recognises Glu and Asp side chains specifically, which, therefore, are predicted to occupy the P1 position on the substrate cleavage site. The positive electrostatic potential featured by the S1 region underlies this specificity. The comparative structural analysis highlights the peculiarity of the astrovirus protease, and differentiates it from the human and viral serine proteases.