Cellular interactions: lessons from the nitrogen‐fixing cyanobacteria

Marine nitrogen‐fixing cyanobacteria play a central role in the open‐ocean microbial community by providing fixed nitrogen (N) to the ocean from atmospheric dinitrogen (N₂) gas. Once thought to be dominated by one genus of cyanobacteria, Trichodesmium, it is now clear that marine N₂‐fixing cyanobacteria in the open ocean are more diverse, include several previously unknown symbionts, and are geographically more widespread than expected. The next challenge is to understand the ecological implications of this genetic and phenotypic diversity for global oceanic N cycling. One intriguing aspect of the cyanobacterial N₂ fixers ecology is the range of cellular interactions they engage in, either with cells of their own species or with photosynthetic protists. From organelle‐like integration with the host cell to a free‐living existence, N₂‐fixing cyanobacteria represent the range of types of interactions that occur among microbes in the open ocean. Here, we review what is known about the cellular interactions carried out by marine N₂‐fixing cyanobacteria and where future work can help. Discoveries related to the functional roles of these specialized cells in food webs and the microbial community will improve how we interpret their distribution and abundance patterns and contributions to global N and carbon (C) cycles.     

Extinction vulnerability of coral reef fishes

With rapidly increasing rates of contemporary extinction, predicting extinction vulnerability and identifying how multiple stressors drive non-random species loss have become key challenges in ecology. These assessments are crucial for avoiding the loss of key functional groups that sustain ecosystem processes and services. We developed a novel predictive framework of species extinction vulnerability and applied it to coral reef fishes. Although relatively few coral reef fishes are at risk of global extinction from climate disturbances, a negative convex relationship between fish species locally vulnerable to climate change vs. fisheries exploitation indicates that the entire community is vulnerable on the many reefs where both stressors co-occur. Fishes involved in maintaining key ecosystem functions are more at risk from fishing than climate disturbances. This finding is encouraging as local and regional commitment to fisheries management action can maintain reef ecosystem functions pending progress towards the more complex global problem of stabilizing the climate.     

Emerging and Reemerging Infectious Diseases: Biocomplexity as an Interdisciplinary Paradigm

Understanding factors responsible for reemergence of diseases believed to have been controlled and outbreaks of previously unknown infectious diseases is one of the most difficult scientific problems facing society today. Significant knowledge gaps exist for even the most studied emerging infectious diseases. Coupled with failures in the response to the resurgence of infectious diseases, this lack of information is embedded in a simplistic view of pathogens and disconnected from a social and ecological context, and assumes a linear response of pathogens to environmental change. In fact, the natural reservoirs and transmission rates of most emerging infectious diseases primarily are affected by environmental factors, such as seasonality or meteorological events, typically producing nonlinear responses that are inherently unpredictable. A more realistic view of emerging infectious diseases requires a holistic perspective that incorporates social as well as physical, chemical, and biological dimensions of our planet’s systems. The notion of biocomplexity captures this depth and richness, and most importantly, the interactions of human and natural systems. This article provides a brief review and a synthesis of interdisciplinary approaches and insights employing the biocomplexity paradigm and offers a social–ecological approach for addressing and garnering an improved understanding of emerging infectious diseases. Drawing on findings from studies of cholera and other examples of emerging waterborne, zoonotic, and vectorborne diseases, a “blueprint” for the proposed interdisciplinary research framework is offered which integrates biological processes from the molecular level to that of communities and regional systems, incorporating public health infrastructure and climate aspects.     

不同起源格氏栲林分下土壤微生物生态分布的初步研究

本文研究了福建三明小湖天然起源和人工起源的格氏栲林下土壤微生物的生态分布。两种起源的格氏栲林下土壤微生物中细菌占绝对优势,人工林芽孢杆菌所占细菌总数比例远大于天然林;天然林微生物总数、细菌、真菌以及固氮菌等生理类群的数量均高于人工林,而且,随着坡位的下降表现为由低至高的递增趋势。青霉和木霉是土壤真菌的优势种属,链霉菌属中的白色类群和黄色类群构成了土壤放线菌的主要组分,但在天然林中的数量明显低于人工林。     

Environmental Life Cycle Assessment of a Canned Sardine Product from Portugal

This study aims to assess the environmental impacts of canned sardines in olive oil, by considering fishing, processing, and packaging, using life cycle assessment (LCA) methodology. The case study concerns a product of a canning factory based in Portugal and packed in aluminum cans. It is the first LCA of a processed seafood product made with the traditional canning method. The production of both cans and olive oil are the most important process in the considered impact categories. The production of olives contributes to the high environmental load of olive oil, related to cultivation and harvesting phases. The production of aluminum cans is the most significant process for all impact categories, except ozone depletion potential and eutrophication potential, resulting from the high energy demand and the extraction of raw materials. To compare to other sardine products consumed in Portugal, such as frozen and fresh sardines, transport to the wholesaler and store was added. The environmental cost of canned sardines is almost seven times higher per kilogram of edible product. The main action to optimize the environmental performance of canned sardines is therefore to replace the packaging and diminish the olive oil losses as much as possible. Greenhouse gas emissions are reduced by half when plastic packaging is considered rather than aluminum. Frozen and fresh sardines represent much lower environmental impacts than canned sardines. Nevertheless, when other sardine products are not possible, it becomes feasible to use sardines for human consumption, preventing them from being wasted or used suboptimally as feed.     

The zoophilic fruitfly Phortica variegata: morphology, ecology and biological niche

Abstract.  Flies belonging to the subfamily Steganinae (Drosophilidae) display unusual zoophilic feeding habits at the adult and/or larval stage. Phortica variegata (Fallén) feeds on tears or eye liquid around the eyes of humans and carnivores. When feeding it is a potential vector of Thelazia callipaeda (Railliet and Henry) eyeworms. Adult and larval stages of this fly may be easily confused with other species belonging to the same genus, and little is known on the biology and ecology of P. variegata . In April–November 2005, a total of 969 P. variegata were collected in an area with a high prevalence of canine thelaziosis. The number of flies collected weekly was then related to climatic and environmental parameters (e.g. temperature, relative humidity and total rainfall) recorded daily at the collection site. The highest number of Phortica were collected during July–August. The sex ratio (number of males : females) rose from ∼ 0.5 during May–July, to ∼ 3.0 in August and 181 during September–October. Distributional data, representing 242 sites at which P. variegata has been collected in Europe, were analysed using a desktop implementation of the genetic algorithm for rule-set prediction (GARP) to model ecological requirements across Europe, as well as in Italy. P. variegata is shown to be mainly active at 20–25 °C and 50–75% RH. The ecological niche model suggests with a high degree of confidence that large areas of Europe are likely to represent suitable habitat for this species, mostly concentrated in central Europe. The results reported here contribute basic knowledge on the ecology and geographical distribution of P. variegata flies, which will be fundamental to gaining a better understanding of their role as vectors of human and animal pathogens.     

2009年第五届“现代生态学讲座”国际会议综述

"现代生态学讲座"系列会议是由国内外华人生态学家联合发起、为加强现代生态学的新理论、新观点、新方法和热点问题的交流与合作的国际会议.总结了2009年6月27～29日在兰州大学举行的第五届现代生态学讲座国际会议的全部二十五场报告,围绕"宏观生态学和可持续发展科学"的会议主题,分别从森林生态学、草地生态学、全球变化生态学、根际和土壤生态学、分子和行为生态学以及农业生态学等角度进行了分类总结.全部报告可归纳为"生态系统服务功能的物质基础"和"生态系统服务的生态学机制"两个大的基础理论问题,而解决问题的途径必须在人类-自然耦合生态系统的大框架下进行探索.对该会议的进一步改善提出了一些建议.     

Effects of exotic plant invasion on soil nitrogen availability

外来植物入侵对土壤氮循环和氮有效性的影响是入侵成功或进一步加剧的重要原因。通过对比相同研究地点入侵区域和无入侵区域的土壤原位氮状态差异, 探讨了外来植物入侵对土壤氮有效性的影响程度和生理生态学机制。基于107篇相关研究文献数据的整合, 发现植物入侵区域相对于无入侵区域土壤总氮、铵态氮、硝态氮、无机氮、微生物生物量氮含量显著增加, 增幅分别为(50 ± 14)%、(60 ± 24)%、(470 ± 115)%、(69 ± 25)%、(54 ± 20)%。土壤硝态氮含量增幅较大反映硝化作用增强, 这可能增加入侵植物硝态氮利用以及喜硝植物的共存。温带地区植物入侵后土壤的硝态氮含量增幅显著高于亚热带地区。固氮植物入侵后土壤的总氮和无机氮含量增幅均显著高于非固氮植物入侵。木本和常绿植物入侵后土壤的总氮含量增幅分别高于草本和落叶植物入侵; 而土壤铵态氮含量的增幅没有显著差异且与固氮入侵植物占比无明显关系; 然而硝态氮含量的增幅普遍较高且与固氮入侵植物占比显著正相关。外来入侵植物固氮功能以及凋落物质量和数量是影响土壤氮矿化和硝化过程的关键因素。该研究为理解外来植物入侵成功和加剧的机制以及入侵植物功能性状与土壤氮动态之间的关系提供了新的见解。     

丛枝菌根真菌伴生细菌的研究进展

在丛枝菌根真菌（Arbuscular mycorrhizal fungi,AMF）的孢子、菌丝的表面或内部栖息着细菌,称之为AMF伴生细菌。AMF伴生细菌种类多样、分布广泛,生态位点包括孢子壁的表面或内部、细胞质、菌丝、孢子果等。其可能的生物学意义包括影响AMF孢子萌发、菌丝生长、菌根形成等过程。由于伴生细菌与AMF联系紧密,其对AMF和土壤微生物生态学具有重要的意义。国际上在该领域的研究已有30多年的历史,就其研究进展进行综述。