The phosphorus‐rich signature of fire in the soil–plant system: a global meta‐analysis

The biogeochemical and stoichiometric signature of vegetation fire may influence post‐fire ecosystem characteristics and the evolution of plant ‘fire traits’. Phosphorus (P), a potentially limiting nutrient in many fire‐prone environments, might be particularly important in this context; however, the effects of fire on P cycling often vary widely. We conducted a global‐scale meta‐analysis using data from 174 soil studies and 39 litter studies, and found that fire led to significantly higher concentrations of soil mineral P as well as significantly lower soil and litter carbon:P and nitrogen:P ratios. These results demonstrate that fire has a P‐rich signature in the soil–plant system that varies with vegetation type. Further, they suggest that burning can ease P limitation and decouple the biogeochemical cycling of P, carbon and nitrogen. These effects resemble a transient reversion to an earlier stage of ecosystem development, and likely underpin at least some of fire's impacts on ecosystems and organisms.     

毛乌素沙地南缘沙漠化临界区域土壤养分的空间异质性

毛乌素沙地南缘沙漠化临界区域是沙地-草地景观界面的关键部位,研究该区域土壤养分的空间格局和生态学过程,对于土地沙漠化的机理研究具有重要的意义。采用经典统计与地统计学相结合的方法,通过半变异函数及其模型、克里格局部插值估计、空间分布图等研究了毛乌素沙地南缘沙漠化临界区域土壤养分的空间异质性特征。结果表明:研究区土壤速效钾含量符合球状模型,全氮和速效磷含量符合指数模型;速效钾含量具有强空间自相关性,其结构方差比为0.882,而全氮和速效磷含量表现为中等程度的空间自相关性,其结构方差比分别为0.501和0.514;3种土壤养分空间自相关距离存在差异,其中全氮和速效钾的变程均为511m,而速效磷的变程为143m;3种土壤养分的分布格局呈现明显的空间规律性,从牛枝子群落到黑沙蒿群落,速效钾和速效磷含量先降低后升高,与研究区的界面变化过程一致,而全氮含量逐渐降低,与研究区的植被覆盖度变化一致;3种土壤养分的标准差都较小,Kriging插值结果比较可靠。     

Flux balance analysis in the production of clavulanic acid by Streptomyces clavuligerus

In this work, in silico flux balance analysis is used for predicting the metabolic behavior of Streptomyces clavuligerus during clavulanic acid production. To choose the best objective function for use in the analysis, three different optimization problems are evaluated inside the flux balance analysis formulation: (i) maximization of the specific growth rate, (ii) maximization of the ATP yield, and (iii) maximization of clavulanic acid production. Maximization of ATP yield showed the best predictions for the cellular behavior. Therefore, flux balance analysis using ATP as objective function was used for analyzing different scenarios of nutrient limitations toward establishing the effect of limiting the carbon, nitrogen, phosphorous, and oxygen sources on the growth and clavulanic acid production rates. Obtained results showed that ammonia and phosphate limitations are the ones most strongly affecting clavulanic acid biosynthesis. Furthermore, it was possible to identify the ornithine flux from the urea cycle and the α‐ketoglutarate flux from the TCA cycle as the most determinant internal fluxes for promoting clavulanic acid production. © 2015 American Institute of Chemical Engineers Biotechnol. Prog., 31:1226–1236, 2015     

Identification and molecular characterization of the nicotianamine synthase gene family in bread wheat

Nicotianamine (NA) is a non‐protein amino acid involved in fundamental aspects of metal uptake, transport and homeostasis in all plants and constitutes the biosynthetic precursor of mugineic acid family phytosiderophores (MAs) in graminaceous plant species. Nicotianamine synthase (NAS) genes, which encode enzymes that synthesize NA from S‐adenosyl‐L‐methionine (SAM), are differentially regulated by iron (Fe) status in most plant species and plant genomes have been found to contain anywhere from 1 to 9 NAS genes. This study describes the identification of 21 NAS genes in the hexaploid bread wheat (Triticum aestivum L.) genome and their phylogenetic classification into two distinct clades. The TaNAS genes are highly expressed during germination, seedling growth and reproductive development. Fourteen of the clade I NAS genes were up‐regulated in root tissues under conditions of Fe deficiency. Protein sequence analyses revealed the presence of endocytosis motifs in all of the wheat NAS proteins as well as chloroplast, mitochondrial and secretory transit peptide signals in four proteins. These results greatly expand our knowledge of NAS gene families in graminaceous plant species as well as the genetics underlying Fe nutrition in bread wheat.     

基于高通量测序的闽楠幼林根际土壤丛枝菌根真菌群落变化

[背景]闽楠是珍贵用材树种.阐明闽楠根际土壤微生物特征,对科学经营闽楠人工林有指导作用.[目的]明确闽楠人工林恢复过程中根际土壤丛枝菌根群落随林龄的变化特征.[方法]采用高通量Illumina MiSeq测序的方法,评估不同林龄闽楠幼林根际土壤丛枝菌根真菌(Arbuscular Mycorrhiza Fungi,AMF...     

GHRP-6 mimics ghrelin-induced stimulation of food intake and suppression of locomotor activity in goldfish

Ghrelin was first identified and characterized from rat stomach as an endogenous ligand for the growth hormone secretagogue (GHS) receptor (GHS-R). Ghrelin also acts as an orexigenic factor and regulates energy balance in rodents. In goldfish, native ghrelin consists of 11 molecular variants, the major form being a 17-residue peptide with n-octanoic acid modification (n-octanoyl ghrelin17), and intraperitoneal (IP) administration of n-octanoyl ghrelin17 induces central actions such as stimulation of food intake and suppression of locomotor activity through capsaicin-sensitive afferents. Four types of GHS-Rs (1a-1, 1a-2, 2a-1 and 2a-2) have been identified in goldfish, and one GHS, GHRP-6, can activate only GHS-R2a-1 in vitro. However, there is no information about the effect of GHRP-6 on food intake and locomotor activity in goldfish in vivo. Therefore, in the present study, we examined whether IP-administered GHRP-6 would mimic the orexigenic action of n-octanoyl ghrelin17 and its suppression of locomotor activity. IP administration of GHRP-6 at 1pmol/g body weight (BW) stimulated food intake, and was equipotent to the orexigenic action of n-octanoyl ghrelin17 at 10 pmol/g BW. IP-injected GHRP-6 at 1 pmol/g BW also induced a significant decrease of locomotor activity, as was the case for IP-injected n-octanoyl ghrelin17 at 10 pmol/g BW. The action of GHRP-6 was blocked by IP-preinjected capsaicin at 160 nmol/g BW. These results suggest that the central action of GHRP-6 might be mediated via the GHS-R2a-1-signaling pathway, and subsequently through capsaicin-sensitive afferents in goldfish.     

Fifteen years of climate change manipulations alter soil microbial communities in a subarctic heath ecosystem

Soil microbial biomass in arctic heaths has been shown to be largely unaffected by treatments simulating climate change with temperature, nutrient and light manipulations. Here, we demonstrate that more than 10 years is needed for development of significant responses, and that changes in microbial biomass are accompanied with strong alterations in microbial community composition. In contrast to slight or nonsignificant responses after 5, 6 and 10 treatment years, 15 years of inorganic NPK fertilizer addition to a subarctic heath had strong effects on the microbial community and, as observed for the first time, warming and shading also led to significant responses, often in opposite direction to the fertilization responses. The effects were clearer in the top 5 cm soil than at the 5–10 cm depth. Fertilization increased microbial biomass C and more than doubled microbial biomass P compared to the non-fertilized plots. However, it only increased microbial biomass N at the 5–10 cm depth. Fertilization increased fungal biomass and the relative abundance of phospholipid fatty acid (PLFA) markers of gram-positive bacteria. Warming and shading decreased the relative abundance of fungal PLFAs, and shading also altered the composition of the bacterial community. The long time lag in responses may be associated with indirect effects of the gradual changes in the plant biomass and community composition. The contrasting responses to warming and fertilization treatments show that results from fertilizer addition may not be similar to the effects of increased nutrient mineralization and availability following climatic warming.