Polymorphic microsatellite loci from the red urchin,Strongylocentrotus franciscanus,with comments on heterozygote deficit

Strongylocentrotus sea urchins are common subjects for studies in developmental and cell biology, reproductive biology, ecology, and evolution. We report 14 microsatellite loci from the red urchin, S. franciscanus, isolated for the purpose of estimating paternal success of males in experimental group spawns. Most of these loci were found to be highly polymorphic in a population from British Columbia. A high frequency of null alleles appears responsible for heterozygote deficit at a majority of these loci, but if used with appropriate caution, these microsatellites should be effective markers for studies of Strongylocentrotus populations.     

Hydrodynamic properties of rigid macromolecules composed of ellipsoidal and cylindrical subunits.

A procedure is devised for the calculation of hydrodynamic properties of rigid macromolecules composed subunits that are modeled as ellipsoids of revolution and cylinders. Owing to the axial symmetry of these shapes, smooth shell models can be constructured for the subunit structure. The bead shell model so constructed is employed for the calculation of the properties. A computer program, HYDROSUB, has been written implementing both the model building and the hydrodynamic calculation. A detailed example of the use of this methodology is presented for the case of the solution properties of the human antibody molecule immunoglobulin G3 (IgG3). Finally, hints are given on other uses and applications of the procedure.     

Distribution of macroinvertebrates in relation to physical and biological variables in the littoral zone of nine New Zealand lakes

Macroinvertebrates play a key role in the littoral zone of lakes. Macroinvertebrate community composition is closely linked to habitat conditions. To date, there have been few attempts to relate macroinvertebrates to habitat factors in lakes. In this study, nine mainly oligotrophic lakes from throughout New Zealand were surveyed for macroinvertebrates. The lakes were selected to represent a range of suspended sediment loading and lake level regimes. Within each lake, several sites were selected to provide a range of exposure to wave action. A multiple regression approach was taken to relate macroinvertebrate community composition and habitat characteristics. The results of the analysis suggest that the littoral zone of the lakes we studied could be divided into four general habitats. The first is the wave wash zone characterised by coarse substrates and macroinvertebrate taxa usually associated with lotic environments, such as Ephemeroptera and Plecoptera. The second habitat is associated with macrophytes and is limited at the top by wave action and at depth by light attenuation. In this zone, the snail Potamopyrgus antipodarum is dominant, along with Trichoptera and Odonata. At the base of the macrophytes is the detrital habitat characterised by fine, organic rich sediments and dominated by chironomids, oligochaetes and Trichoptera. At depths below the macrophyte zone, fine sediments are found, and bivalves such as the freshwater mussel Hyridella menziesi are common. While macroinvertebrate abundance can be highly variable, some general predictions of community structure can be made based on a few key environmental factors. Abundance of snails Odonata and Trichoptera was positively related to macrophyte biomass. Some macroinvertebrate groups such as oligochaetes, chironomids, snails and bivalves were more common in fine substrates, while Ephemeroptera were characteristic of coarse substrates. Detrital biomass was important for most of the macroinvertebrate groups studied showing a positive relationship for oligochaetes and Trichoptera and a negative relationship for Ephemeroptera and Plecoptera.     

A Gradualist Theory of Discovery in Ecology

The distinction between the context ofdiscovery and the context of justificationrestricts philosophy of science to the rationalreconstruction of theories, and characterizesscientific discovery as rare, theoreticalupheavals that defy rational reconstruction. Kuhnian challenges to the two contextsdistinction show that non-rational elementspersist in the justification of theories, butgo no further to provide a positive account ofdiscovery. A gradualist theory of discoverydeveloped in this paper shows, with supportfrom ecological cases, that discoveries areroutinely made in ecology by extending modelsto new domains, or by making additions toearlier models. The logic of discovery isphilosophically accessible once it isappreciated that model truth is presumed, evenif counterfactually, in ecologists' applicationof models. A gradualist view shows thatmodels' heuristic power routinely leads todiscoveries.     

Forecasting airborne pollen concentrations: Development of local models

People's sensitivity to allergies may representone of the most important health factors of thenext century to which attention must be paid inorder to reduce the incidence of social costsand improve the quality of life.Taking into consideration the earnest requestsof the medical-scientific communityEmilia-Romagna ARPA (Regional Agency for thePrevention of the Environment) moved theattention from the monitoring to a short andmedium term prediction of the concentration ofallergenic pollens in the air in order toachieve a more effective therapeutic action.Our main objectives are to improve seasonalforecasts and to interpret anomalous years.A neural network model for grass pollenforecasting has been implemented. Inputvariables were meteorological situations, i.e.,daily temperature (max., min. and average) andrainfall, in addition to combinations ofindividual variables and their thresholds. Theoutput was daily pollen concentration.The model was able to understand and predictanomalous years. We demonstrate that therelationships between pollen concentrations andmeteorological situations are independent fromsite. This means that such models canunderstand the differences in differentareas.     

Highly polymorphic microsatellite markers developed for the social halictine bee Lasioglossum (Chilalictus) hemichalceum

Lasioglossum ( Chilalictus ) hemichalceum is a social halictine bee species for which we developed 10 polymorphic microsatellite loci in order to investigate detailed genetic structure of cooperating indvididuals. The loci are highly polymorphic with allele numbers ranging between eight and 22. A null allele was detected at one locus in the absence of pedigree information.     

An in situ estimate of food consumption of five cyprinid species in Lake Balaton

Daily rations of five cyprinid species, bream Abramis brama , silver bream Blicca bjoerkna , roach Rutilus rutilus , gibel Carassius auratus gibelio and carp Cyprinus carpio , in Lake Balaton, a large shallow lake, estimated by the Eggers model differed from that of the Elliott – Persson model by only − 4.3 to +7.3% (the differences were insignificant). Daily rations varied within the range of 0.23–0.69 in bream, 0.55–3.61 in silver bream, 0.69–4.65 in roach, 0.38–3.16 in gibel and 0.50–9.74 g dry 100 g wet fish mass⁻¹ day ⁻¹ in carp at temperatures ranging from 8.7–25.8% C. Daily ration was related exponentially with temperature in silver bream, roach, gibel and carp. For bream, a significant relationship was obtained only when a daily ration value was excluded from the analysis. Annual rations were assessed using the relationships between the daily ration estimates from the Elliott—Persson model and water temperature, and the long-term averages of the monthly water temperature data. From these estimates the bream population consumed 104%, silver bream 424%, roach 487%, gibel 363% and carp 913% dry mass of food of its wet biomass annually.     

DIVING BEHAVIOR OF SUBADULT AND ADULT HARBOR SEALS IN PRINCE WILLIAM SOUND, ALASKA

Satellite-linked depth recorders (SDRs) were attached to 47 harbor seals in Prince William Sound, Alaska, during 1992–1996. Parameters describing diving effort, diving focus, and focal depth (depth bin to which diving was focused) were calculated from binned data on maximum dive depth and time spent at depth, and analyzed using repeated-measures mixed models. This analysis method accounted for individual variability, temporal autocorrelation, and the binned nature of SDR data, which are often ignored using standard statistical techniques. Results indicated that diving effort remained steady from September to April, when seals spent 68%-75% of their overall time in the water. Time spent in the water declined to 60% in May and to about 40% in July. Seals spent the most time in the water at night and the least in the morning. The diving of all seals in all months was highly focused. Overall, diving was focused to one depth bin approximately 75% of the time. Diving was more focused for females than for males and subadults. Focal dive depth was deepest in winter and shallowest during May-July. Focal depth and diving focus varied by region. Collinearity between month and region in the focal depth model suggests that seals move in winter to regions where prey are found deeper in the water column. Variations in diving behavior presumably result from combinations of regional bathymetry, seasonal cycles in type or depth distribution of prey, and seal life-cycle events such as reproduction and molting.