血培养标本中病原菌的分布特征、耐药性变迁和耐药基因分型

目的 分析嘉兴市中医医院血培养标本中病原菌的分布特征、耐药性变迁和耐药基因分型。方法 将本院2013年1月至2016年12月送检的血培养标本进行培养、转种、分离鉴定和药敏试验,采用聚合酶链反应（PCR）技术进行产超广谱β-内酰胺酶（ESBLs）革兰阴性菌和革兰阳性菌的耐药基因检测,并对阳性菌株、科室分布、耐药性等相关数据进行分析。结果 2013年1月至2016年12月共送检血培养标本27 003份,共分离出病原菌（剔除重复菌株）978株,阳性率为3.62%,2015‒2016年阳性率显著低于2013‒2014年,差异有统计学意义（P<0.01）。血培养阳性株数前三位为ICU、儿科和肾内科,2015‒2016年与2013‒2014年相比,ICU的阳性株数构成比显著下降,儿科、呼吸内科和其他科室显著上升,差异有统计学意义（P<0.01）。血培养致病菌检出率最高的为大肠埃希菌,占18.51%,其次为表皮葡萄球菌,占10.53%,不可忽视的是真菌,占4.91%。2015‒2016年与2013‒2014年相比,金黄色葡萄球菌检出率显著上升,粪肠球菌和近平滑假丝酵母菌的检出率显著下降,差异有统计学意义（P<0.05）。血培养分离的大肠埃希菌对氨苄西林的耐药率最高,肺炎克雷伯菌对呋喃妥因的耐药率最高。2015‒2016年与2013‒2014年相比,大肠埃希菌对氨苄西林/舒巴坦和庆大霉素的耐药率显著下降（P<0.01）,肺炎克雷伯菌对庆大霉素的耐药率显著上升（P<0.01）。分离的表皮葡萄球菌和金黄色葡萄球菌对青霉素的耐药率最高,2015‒2016年与2013‒2014年相比,表皮葡萄球菌对红霉素和氯洁霉素的耐药率显著下降（P<0.01）,金黄色葡萄球菌对环丙沙星和左氧氟沙星的耐药率显著下降（P<0.01）。大肠埃希菌ESBLs（+）菌株对氨苄西林、氨苄西林/舒巴坦、头孢唑啉等的耐药率以及所有基因型表达率均显著高于ESBLs（‒）菌株（P<0.05或P<0.01）;肺炎克雷伯菌ESBLs（+）菌株对头孢唑啉、头孢曲松、庆大霉素等的耐药率以及TEM、SHV、CTX-MⅡ基因型表达率均显著高于ESBLs（‒）菌株（P<0.05或P<0.01）。表皮葡萄球菌检出mecA基因（+）72株,金黄色葡萄球菌检出mecA基因（+）53株。屎肠球菌和粪肠球菌分离株中,未发现有vanA（+）、vanB（+）和vanM（+）万古霉素耐药株。结论 了解本院血培养致病菌整体变化趋势、病区分布特点及耐药性变迁和耐药基因分型,对临床合理使用抗生素和院内感染的控制有重要意义。     

Negative emotional biases in late chronotypes

Increasing evidence suggests evening chronotypes are at increased risk for developing depression. Here, we examined if, similar to acutely depressed patients, evening chronotype individuals display biases in emotional face recognition. Two hundred and twenty-six individuals completed an online survey including measures of sleep quality, depression/anxiety and chronotype followed by a simple emotion recognition task presenting male and female faces morphed in 10 steps between 0 (neutral) and 100% sad or happy. Evening chronotype was associated with increased recognition of sad facial expressions independently of sleep quality, mood, age and gender. The current results extend previous work indicating that negative biases in emotional processing are present in evening chronotypes and may have important implications for the prevention and treatment of depression in these vulnerable individuals.     

不同灌水量下限对高羊茅绿期及抗寒性生理指标的影响

采用盆栽试验的方法,研究了秋末冬初不同灌水量下限\[分别占田间持水量(FC)的80%、70%、60%、50%\]对高羊茅绿期及抗寒性生理指标的影响.结果表明：在冬季低温条件下,80%和70%FC灌水处理使高羊茅叶片相对含水量、保护酶(SOD、POD和CAT)活性、叶绿素、可溶性糖和游离脯氨酸含量维持在较高水平,丙二醛含量和电解质外渗率降低,高羊茅的抗寒性增强.80%FC灌水处理分别较70%、60%和50%FC处理的草坪草绿期延长4、22和28 d,到达枯黄休眠的时间最晚,完成返青的时间最早.综合考虑节水和提高水分利用效率等多种因素,70%FC灌水处理为高羊茅秋末冬初季节最佳的灌水下限.     

Variation patterns of bilateral characters: variation among characters and among populations in the White Sea herring, Clupea pallasi marisalbi (Berg) (Clupeidae, Teleosti)

Phenotypic variation in two populations of the White Sea herring Clupea pallasi marisalbi (Berg) (spring spawners and summer spawners), based on 21 meristic and 21 morphometric bilateral characters, has been studied. Total phenotypic variance was partitioned into a within-individual or stochastic component (fluctuating asymmetry) and an among-individual or factorial component, reflecting heterogeneity among individuals and resulting from the diversity of genotypes and environments. Both standardized stochastic and factorial components show clear negative correlations with means across characters. Negative correlation of the factorial components with means is in contradiction to the commonly accepted explanation of negative means-standardized variances association. Slopes of regression of standardized stochastic variances on means in meristic characters was significantly higher in summer spawners than in spring spawners, and results in discordance of stochastic variance across characters: it is higher in spring spawners for low and average variability characters and does not differ for both populations for high variability characters. The populations do not show notable differences in variation of morphometric characters. Consideration of other available data on these populations, such as spawning behaviour and salinity resistance of larvae, suggests that the lower slope of regression of stochastic variances on means is associated with the reduced viability of spring spawners     

Five fundamental ways in which complex food webs may spiral out of control

Theory suggests that increasingly long, negative feedback loops of many interacting species may destabilize food webs as complexity increases. Less attention has, however, been paid to the specific ways in which these ‘delayed negative feedbacks’ may affect the response of complex ecosystems to global environmental change. Here, we describe five fundamental ways in which these feedbacks might pave the way for abrupt, large-scale transitions and species losses. By combining topological and bioenergetic models, we then proceed by showing that the likelihood of such transitions increases with the number of interacting species and/or when the combined effects of stabilizing network patterns approach the minimum required for stable coexistence. Our findings thus shift the question from the classical question of what makes complex, unaltered ecosystems stable to whether the effects of, known and unknown, stabilizing food-web patterns are sufficient to prevent abrupt, large-scale transitions under global environmental change.     

A comparison of four different conformations adopted by human telomeric G‐quadruplex using computer simulations

The telomeric G‐quadruplexes for their unique structural features are considered as potential anticancer drug targets. These, however, exhibit structural polymorphism as different topology types for the intra‐molecular G‐quadruplexes from human telomeric G‐rich sequences have been reported based on NMR spectroscopy and X‐ray crystallography. These techniques provide detailed atomic‐level information about the molecule but relative conformational stability of the different topologies remains unsolved. Therefore, to understand the conformational preference, we have carried out quantum chemical calculations on G‐quartets; used all‐atom molecular dynamics (MD) simulations and steered molecular dynamics (SMD) simulations to characterize the four human telomeric G‐quadruplex topologies based on its G‐tetrad core‐types, viz., parallel, anti‐parallel, mixed‐(3 + 1)‐form1 and mixed‐(3 + 1)‐form2. We have also studied a non‐telomeric sequence along with these telomeric forms giving a comparison between the two G‐rich forms. The structural properties such as base pairing, stacking geometry and backbone conformations have been analyzed. The quantum calculations indicate that presence of a sodium ion inside the G‐tetrad plane or two potassium ions on both sides of the plane give it an overall planarity which is much needed for good stacking to form a helix. MD simulations indicate that capping of the G‐tetrad core by the TTA loops keep the terminal guanine bases away from water. The SMD simulations along with equilibrium MD studies indicate that the parallel and non‐telomeric forms are comparatively less stable. We could come to the conclusion that the anti‐parallel form and also the mixed‐(3 + 1)‐form1 topology are most likely to represent the major conformation., 2016. © 2015 Wiley Periodicals, Inc. Biopolymers 105: 83–99, 2016     

线性规划法在植物生态学数学模型参数估计中的应用初探

本文提出了一种植物生态学数学模型参数估计的新方法——线性规划法,并结合最小二乘法对模型参数的估计进行了实例分析。认为某种程度上前者更优于后者。是一种值得进一步研究的方法。     

Biases in the estimation of the demographic parameters of a snowshoe hare population

1. Survival rates and natalities for a population of snowshoe hares in the Yukon were estimated independently of and simultaneously with estimates of population change during the increase phase of a hare cycle.
2. Simple demographic models are used to show that even though the estimated survival rates and natalities were high relative to previously published estimates, the observed demographic parameters are unable to explain the extent of population increase, and we conclude that some of these parameters must be underestimates.
3. A sensitivity analysis is used to examine the potential influence of changes in these demographic parameters on the population growth rate. During most years of the hare cycle the population growth rate is potentially most sensitive to changes in juvenile postweaning survival. Only during crash years is adult survivorship likely to be a more important determinant of the rate of population change.
4. Examination of previously published data sets on two full population cycles suggests that while survival rates are positively correlated with population growth rates, their incorporation into demographic models results in frequent underestimation of the rate of population increase.     

Negative control of BAK1 by protein phosphatase 2A during plant innate immunity

Recognition of pathogen‐associated molecular patterns (PAMPs) by surface‐localized pattern‐recognition receptors (PRRs) activates plant innate immunity, mainly through activation of numerous protein kinases. Appropriate induction of immune responses must be tightly regulated, as many of the kinases involved have an intrinsic high activity and are also regulated by other external and endogenous stimuli. Previous evidences suggest that PAMP‐triggered immunity (PTI) is under constant negative regulation by protein phosphatases but the underlying molecular mechanisms remain unknown. Here, we show that protein Ser/Thr phosphatase type 2A (PP2A) controls the activation of PRR complexes by modulating the phosphostatus of the co‐receptor and positive regulator BAK1. A potential PP2A holoenzyme composed of the subunits A1, C4, and B’η/ζ inhibits immune responses triggered by several PAMPs and anti‐bacterial immunity. PP2A constitutively associates with BAK1 in planta. Impairment in this PP2A‐based regulation leads to increased steady‐state BAK1 phosphorylation, which can poise enhanced immune responses. This work identifies PP2A as an important negative regulator of plant innate immunity that controls BAK1 activation in surface‐localized immune receptor complexes.     

An assessment of the DNA barcodes of Indian freshwater fishes

Freshwater fishes in India are poorly known and plagued by many unresolved cryptic species complexes that masks some latent and endemic species. Limitations in traditional taxonomy have resulted in this crypticism. Hence, molecular approaches like DNA barcoding, are needed to diagnose these latent species. We have analyzed 1383 barcode sequences of 175 Indian freshwater fish species available in the databases, of which 172 sequences of 70 species were generated. The congeneric and conspecific genetic divergences were calculated using Kimura's 2 parameter distance model followed by the construction of a Neighbor Joining tree using the MEGA 5.1. DNA barcoding principle at its first hand approach, led to the straightforward identification of 82% of the studied species with 2.9% (S.E = 0.2) divergence between the nearest congeners. However, after validating some cases of synonymy and mislabeled sequences, 5% more species were found to be valid. Sequences submitted to the database under different names were found to represent single species. On the other hand, some sequences of the species like Barilius barna, Barilius bendelisis and Labeo bata were submitted to the database under a single name but were found to represent either some unexplored species or latent species. Overall, 87% of the available Indian freshwater fish barcodes were diagnosed as true species in parity with the existing checklist and can act as reference barcode for the particular taxa. For the remaining 13% (21 species) the correct species name was difficult to assign as they depicted some erroneous identification and cryptic species complex. Thus, these barcodes will need further assay and inclusion of barcodes of more specimens from same and sister species.