Bottom‐up Conservation

Conservation initiatives that have worked well in temperate and developed regions have often been applied in the tropics but with only limited success. Part of this failure is due to top–down conservation planning that has been conducted without taking local socio‐economic considerations into adequate account. Here, we argue that conservation approaches would benefit from a deeper understanding of human–nature interactions.     

Waterlogging and fire impacts on nitrogen availability and utilization in a subtropical wet heathland (wallum)

Protein, amino acids and ammonium were the main forms of soluble soil nitrogen in the soil solution of a subtropical heathland (wallum). After fire, soil ammonium and nitrate increased 90- and 60-fold, respectively. Despite this increase in nitrate availability after fire, wallum species exhibited uniformly low nitrate reductase activities and low leaf and xylem nitrate. During waterlogging soil amino acids increased, particularly γ-aminobutyric acid (GABA) which accounted for over 50% of amino nitrogen. Non-mycorrhizal wallum species were significantly (P < 0.05) ¹⁵N-enriched (0.3–4.3‰) compared to species with mycorrhizal associations (ericoid-type, ecto-, va-mycorrhizal) which were strongly depleted in ¹⁵N (-6.3 to -1.8‰). Lignotubers and roots had δ¹⁵N signatures similar to that of the leaves of respective species. The exceptions were fine roots of ecto-, ecto/va-, and ericoid type mycorrhizal species which were enriched in ¹⁵N (0.1–2.4‰). The 5¹⁵N signatures of δ¹⁵N_{total soil N} and δ¹⁵N_{soil NH4+} were in the range 3.7–4.5‰, whereas δ¹⁵N_{soil NO3?} was significantly (P < 0.05) more enriched in ¹⁵N (9.2–9.8‰). It is proposed that there is discrimination against ¹⁵N during transfer of nitrogen from fungal to plant partner. Roots of selected species incorporated nitrogen sources in the order of preference: ammonium > glycine > nitrate. The exception were proteoid roots of Hakea (Proteaceae) which incorporated equal amounts of glycine and ammonium.     

Adaptive Admixture of HLA Class I Allotypes Enhanced Genetically Determined Strength of Natural Killer Cells in East Asians

Human natural killer (NK) cells are essential for controlling infection, cancer, and fetal development. NK cell functions are modulated by interactions between polymorphic inhibitory killer cell immunoglobulin-like receptors (KIR) and polymorphic HLA-A, -B, and -C ligands expressed on tissue cells. All HLA-C alleles encode a KIR ligand and contribute to reproduction and immunity. In contrast, only some HLA-A and -B alleles encode KIR ligands and they focus on immunity. By high-resolution analysis of KIR and HLA-A, -B, and -C genes, we show that the Chinese Southern Han (CHS) are significantly enriched for interactions between inhibitory KIR and HLA-A and -B. This enrichment has had substantial input through population admixture with neighboring populations, who contributed HLA class I haplotypes expressing the KIR ligands B*46:01 and B*58:01, which subsequently rose to high frequency by natural selection. Consequently, over 80% of Southern Han HLA haplotypes encode more than one KIR ligand. Complementing the high number of KIR ligands, the CHS KIR locus combines a high frequency of genes expressing potent inhibitory KIR, with a low frequency of those expressing activating KIR. The Southern Han centromeric KIR region encodes strong, conserved, inhibitory HLA-C-specific receptors, and the telomeric region provides a high number and diversity of inhibitory HLA-A and -B-specific receptors. In all these characteristics, the CHS represent other East Asians, whose NK cell repertoires are thus enhanced in quantity, diversity, and effector strength, likely augmenting resistance to endemic viral infections.     

Evolutionary trade-offs at the Arabidopsis WRR4A resistance locus underpin alternate Albugo candida race recognition specificities

The oomycete Albugo candida causes white rust of Brassicaceae, including vegetable and oilseed crops, and wild relatives such as Arabidopsis thaliana. Novel White Rust Resistance (WRR) genes from Arabidopsis enable new insights into plant/parasite co-evolution. WRR4A from Arabidopsis accession Columbia (Col-0) provides resistance to many but not all white rust races, and encodes a nucleotide-binding, leucine-rich repeat immune receptor. Col-0 WRR4A resistance is broken by AcEx1, an isolate of A. candida. We identified an allele of WRR4A in Arabidopsis accession Øystese-0 (Oy-0) and other accessions that confers full resistance to AcEx1. WRR4A^Oy-0 carries a C-terminal extension required for recognition of AcEx1, but reduces recognition of several effectors recognized by the WRR4A^Col-0 allele. WRR4A^Oy-0 confers full resistance to AcEx1 when expressed in the oilseed crop Camelina sativa.     

Conservation implications of adaptation to tropical climates from a historical perspective

Tropical climates and the biodiversity associated with them have long interested natural historians. Alexander von Humboldt inspired a generation of scientists, such as Charles Darwin and Alfred Russel Wallace, to observe and study tropical ecosystems. More recently, the mid‐20th century saw Theodosius Dobzhansky and Daniel Janzen lay the foundations for studying adaptation to tropical climates. Now in the 21st century, we are beginning to realize the threats posed by current and future climate change to tropical populations which, despite relatively low levels of projected warming for low‐latitude regions, face potentially significant detrimental impacts. Building on the insights of researchers in decades and centuries past, improved understanding of tropical ecology, evolution and biogeography will help us to conceive how future global change will impact on biodiversity.     

The Blue Water Footprint of Primary Copper Production in Northern Chile

Water consumption related to the life cycle of metals is seldom reported, even though mines are often situated in very dry regions. In this study we quantified the life cycle consumption of groundwater and fresh surface water (blue water footprint [WF_blue]) for the extraction and production of high‐grade copper refined from both a copper sulfide ore and a copper oxide ore in the Atacama Desert of northern Chile. Where possible, we used company‐specific data. The processes for extracting copper from the two types of ore are quite different from each other, and the WF_blue of the sulfide ore refining process is 2.4 times higher than that of the oxide ore refining process (i.e., 96 cubic meters per metric ton [tonne] of copper versus 40 cubic meters per tonne of copper). Most of the water consumption (59% of WF_blue) in the sulfide ore process occurred at the concentrator plant, via seepage, accumulation, and also by evaporation. In the oxide ore process, the main user of water is the heap‐leaching process, with 45% of WF_blue. The crushing and agglomeration operations, electrowinning cells, and solution pools are also significant contributors to the total consumption of water in the oxide ore process. Most of the water consumed in the oxide ore process was lost to evaporation. The WF_blue of the oxide ore process can be reduced by preventing water evaporation and using more sophisticated devices during irrigation of the leaching heaps. The WF_blue of the sulfide ore refining process can be reduced by improving water recovery (i.e., reducing seepage, accumulation, and evaporation) from the tailings dam at the concentrator plant. Using seawater in the production of copper is also a promising option to reduce the WF_blue by up to 62%.     

Selection of flowering forbs for conserving natural enemies in rice fields

The diversity of natural enemies harboured by flowering forbs on rice field bunds was recorded. Ageratum conozoides with a maximum Shannon diversity index of 1.8 followed by Acmella uliginosa, Eclipta alba and Tridax procumbens are amenable for ecological engineering, providing nectar, pollen and alternate prey to natural enemies.     

Evaluation of Antibacterial Activity of Lavandulapedunculata subsp. atlantica (Braun‐Blanq.) Romo Essential Oil and Selected Terpenoids against Resistant Bacteria Strains–Structure–Activity Relationships

The genus Lavandula is known for its different uses in traditional medicine. This study is interested in the chemical composition of Lavandulapedunculata subsp.atlantica (Braun‐Blanq. ) Romo as well as evaluating its antibacterial potential against multi‐resistant strains. The analysis of Lavandulaatlantica essential oil (LAEO) allows the identification of 47 components representing 93.6 % of all identified. The main constituent of LAEO was camphor (50.4 %), followed by fenchone (14.1 %) and camphene (5.6 %). The antibacterial assays revealed that LAEO was active against all the studied bacteria. A preliminary study of the relationship between certain terpenoids and antibacterial activity was also carried out in order to note the compound(s) that are responsible for LAEO's antibacterial activity. This study showed that the activity of the essential oil may be due to the presence of certain minor compounds such as carvone, considering the presence of the synergistic effect between the essential oil.