A spinach genome assembly with remarkable completeness,and its use for rapid identification of candidate genes for agronomic traits

Spinach (Spinacia oleracea) is grown as a nutritious leafy vegetable worldwide. To accelerate spinach breeding efficiency, a high-quality reference genome sequence with great completeness and continuity is needed as a basic infrastructure. Here, we used long-read and linked-read technologies to construct a de novo spinach genome assembly, designated SOL_r1.1, which was comprised of 287 scaffolds (total size: 935.7 Mb; N₅₀ = 11.3 Mb) with a low proportion of undetermined nucleotides (Ns = 0.34%) and with high gene completeness (BUSCO complete 96.9%). A genome-wide survey of resistance gene analogues identified 695 genes encoding nucleotide-binding site domains, receptor-like protein kinases, receptor-like proteins and transmembrane-coiled coil domains. Based on a high-density double-digest restriction-site associated DNA sequencing-based linkage map, the genome assembly was anchored to six pseudomolecules representing ∼73.5% of the whole genome assembly. In addition, we used SOL_r1.1 to identify quantitative trait loci for bolting timing and fruit/seed shape, which harbour biologically plausible candidate genes, such as homologues of the FLOWERING LOCUS T and EPIDERMAL PATTERNING FACTOR-LIKE genes. The new genome assembly, SOL_r1.1, will serve as a useful resource for identifying loci associated with important agronomic traits and for developing molecular markers for spinach breeding/selection programs.     

Melatonin: A master regulator of plant development and stress responses

Melatonin is a pleiotropic molecule with multiple functions in plants. Since the discovery of melatonin in plants, numerous studies have provided insight into the biosynthesis, catabolism, and physiological and biochemical functions of this important molecule. Here, we describe the biosynthesis of melatonin from tryptophan, as well as its various degradation pathways in plants. The identification of a putative melatonin receptor in plants has led to the hypothesis that melatonin is a hormone involved in regulating plant growth,aerial organ development, root morphology, and the floral transition. The universal antioxidant activity of melatonin and its role in preserving chlorophyll might explain its anti-senescence capacity in aging leaves. An impressive amount of research has focused on the role of melatonin in modulating postharvest fruit ripening by regulating the expression of ethylene-related genes.Recent evidence also indicated that melatonin functions in the plant's response to biotic stress,cooperating with other phytohormones and wellknown molecules such as reactive oxygen species and nitric oxide. Finally, great progress has been made towards understanding how melatonin alleviates the effects of various abiotic stresses, including salt, drought, extreme temperature, and heavy metal stress. Given its diverse roles, we propose that melatonin is a master regulator in plants.     

Fossil fruits of Illigera (Hernandiaceae) from the Eocene of central Tibetan Plateau

Illigera (Hernandiaceae) is a liana genus distributed mainly in the tropical Asia and Africa. Previous fossil records suggested that Illigera was restricted in western North America during the Eocene. Recent paleobotanical investigation has unveiled a Paleogene flora that is totally different from today's vegetation in central Tibet. This provides novel insights into the paleoenvironmental change during the evolution of the Tibetan Plateau (TP). Here, we investigated 10 fruit impressions of Illigera from the early middle Eocene Niubao Formation in the Bangor Basin, central TP. The fossil winged fruits are characterized by their eroded fruit wings, well preserved fusiform locular areas with a median ridge bisecting the fruit, and short veins fanning radially outward. These features allow us to assign these fossils to Illigera eocenica, a species originally discovered in the Eocene of western North America. This is the second fossil occurrence of Illigera worldwide, and the first in Asia. Our finding suggests a warm and humid climate in the central TP during the early middle Eocene, and a close floristic link between Asia and North America during the Paleogene. We also propose a Northern Hemisphere origin and a Paleogene dispersal event from Northern Hemisphere to Africa for Illigera.     

正交试验法优化桑叶多糖提取工艺

以脱除黄酮的桑叶为原料,采用热水浸提法提取桑叶多糖,研究了提取温度、提取时间、料液比、水溶液pH和提取次数对桑叶多糖得率的影响,通过正交实验优化了提取工艺条件。结果表明,在提取次数为2次条件下,桑叶多糖最佳提取工艺条件为提取温度100℃、提取时间4 h、提取液pH7、料液比(原料:提取液,g/mL)1:30,多糖得率为2.74%。该工艺稳定,桑叶多糖得率高,易于工业化生产。     

微波法提取楮实子多糖的工艺研究

采用单因素试验和正交试验,对微波法提取楮实子多糖的工艺进行研究,得到了最佳工艺条件:料液比1∶15,微波处理时间12 min,微波功率450 w,浸泡时间180min.在此条件下,楮实子多糖的提取率为8.79％.     

不同基因型梨木质素代谢对石细胞含量和果实口感的影响

以五种基因型梨果实为材料,对石细胞团的大小、分布进行解剖学观察,并测定石细胞、木质素含量和木质素相关合成酶PAL、POD、PPO活性,探讨不同基因型梨果实木质素代谢对石细胞含量及口感的影响.结果表明,不同基因型梨木质素含量高时,石细胞含量也高,石细胞团相对较大,分布较密集,口感差.各基因型的梨木质素、石细胞含量和大小为...     

Repeated phenotypic changes highlight molecular targets of convergent evolution

How predictable is evolution at the molecular level? An example of repeated evolution in rice and Brassica illustrates how selection might preferentially target certain genes and mutations.     

Analysis of a hyper-diverse seed dispersal network: modularity and underlying mechanisms

Mutualistic interactions involving pollination and ant-plant mutualistic networks typically feature tightly linked species grouped in modules. However, such modularity is infrequent in seed dispersal networks, presumably because research on those networks predominantly includes a single taxonomic animal group (e.g. birds). Herein, for the first time, we examine the pattern of interaction in a network that includes multiple taxonomic groups of seed dispersers, and the mechanisms underlying modularity. We found that the network was nested and modular, with five distinguishable modules. Our examination of the mechanisms underlying such modularity showed that plant and animal trait values were associated with specific modules but phylogenetic effect was limited. Thus, the pattern of interaction in this network is only partially explained by shared evolutionary history. We conclude that the observed modularity emerged by a combination of phylogenetic history and trait convergence of phylogenetically unrelated species, shaped by interactions with particular types of dispersal agents.     

Oviposition dynamics and larval development of Helicoverpa armigera on a highly preferred unsuitable host plant,Solanum viarum

Oogenesis and oviposition dynamics of female moths of tomato fruitworm, Helicoverpa armigera Hübner (Lepidoptera: Noctuidae), were compared in a monoculture of tomato (Solanum lycopersicum L.) and in mixtures with a highly preferred but unsuitable host plant, Solanum viarum Dunal. Female H. armigera provided with S. viarum laid many more eggs than those provided with tomato, both in choice and no‐choice experiments. Gravid female moths did not display any preference for oviposition neither between young or old plants of S. viarum or tomato, nor between young and old leaves of S. viarum. Larval mortality and larval developmental period significantly increased, with subsequent reduction in pupal weight, when H. armigera larvae fed on S. viarum leaves compared to a meridic diet. Oviposition of female moths significantly increased in tomato in the presence of S. viarum volatiles. However, in screen cages with an increasing percentage of S. viarum as a trap crop, the number of eggs laid on tomato as the main crop was the same. The results of this study are discussed in light of the possibility of using S. viarum as a ‘dead‐end’ trap crop.