Amino acid sequence of myoglobin from the chitonLiolophura japonica and a phylogenetic tree for molluscan globins

Myoglobin was isolated from the radular muscle of the chitonLiolophura japonica, a primitive archigastropodic mollusc.Liolophura contains three monomeric myoglobins (I, II, and III), and the complete amino acid sequence of myoglobin I has been determined. It is composed of 145 amino acid residues, and the molecular mass was calculated to be 16,070 D. The E7 distal histidine, which is replaced by valine or glutamine in several molluscan globins, is conserved inLiolophura myoglobin. The autoxidation rate at physiological conditions indicated thatLiolophura oxymyoglobin is fairly stable when compared with other molluscan myoglobins. The amino acid sequence ofLiolophura myoglobin shows low homology (11–21%) with molluscan dimeric myoglobins and hemoglobins, but shows higher homology (26–29%) with monomeric myoglobins from the gastropodic molluscsAplysia, Dolabella, andBursatella. A phylogenetic tree was constructed from 19 molluscan globin sequences. The tree separated them into two distinct clusters, a cluster for muscle myoglobins and a cluster for erythrocyte or gill hemoglobins. The myoglobin cluster is divided further into two subclusters, corresponding to monomeric and dimeric myoglobins, respectively.Liolophura myoglobin was placed on the branch of monomeric myoglobin lineage, showing that it diverged earlier from other monomeric myoglobins. The hemoglobin cluster is also divided into two subclusters. One cluster contains homodimeric, heterodimeric, tetrameric, and didomain chains of erythrocyte hemoglobins of the blood clamsAnadara, Scapharca, andBarbatia. Of special interest is the other subcluster. It consists of three hemoglobin chains derived from the bacterial symbiont-harboring clamsCalyptogena andLucina, in which hemoglobins are supposed to play an important role in maintaining the symbiosis with sulfide bacteria.     

The value of figs to chimpanzees

Nine Ugandan figs have consistent differences in nutrient concentration between the pulp and seed fractions. Pulp has more water-soluble carbohydrates, complex carbohydrates, calories, and ash, while the seed fraction has more condensed tannins, lipids, and fiber. Because species differ, nutrient concentration in pulp could not be predicted from analysis of whole figs. Chimpanzees in Kibale Forest relied heavily on figs throughout 29 months, feeding relatively intensely at large trees. Fig size varied between species, between individuals of the same species, and between fruiting cycles of the same tree. Larger figs had higher water concentrations but still led to higher rates of nutrient intake per minute for chimpanzees, monkeys, and hornbills. Chimpanzees ate more than 40 cal/min, excluding calories derived from insoluble fiber, when harvesting large figs.Deceased, July 1990.     

The subtidal macrobenthic assemblages of Bahía San Sebastián (Tierra del Fuego,Argentina)

Bahía San Sebastián (BSS), a shallow and protected environment on the eastern coast of Tierra del Fuego (Argentina), is a prime habitat for several species of nearctic migratory birds that visit the area during summer to feed in its huge intertidal mudflats. The area has also great economic value due to the extraction and transport of hydrocarbons. Twenty-three dredge stations were analysed and presence/absence data were used to classify stations and species by cluster analysis. Two algae and 113 taxa of macrobenthic invertebrates from 12 animal phyla were identified. Species richness was one order of magnitude higher (mean 29.0 sp st⁻¹) in stations located outside or in the southern unprotected section of BSS than in most muddy or sandy stations within the bay (mean 3.7 sp st⁻¹). Hard bottom stations outside BSS were dominated by a rich assemblage of sessile filter-feeders, mainly bryozoans, hydrozoans, ascidians, sponges, and the bivalve Aulacomya atra. Soft bottom areas inside BSS were mainly populated by relatively few species of deposit-feeders, such as the orbiniid polychaete Phylo felix, which was particularly frequent and widespread. Shells of the clam Mulinia edulis are very common, representing one of the few hard substrata available for sessile species on soft bottoms. Epibenthic assemblages within BSS were dominated by the detritivorous isopod Serolis paradoxa and the crab Eurypodius latreillei. The macrobenthic fauna of BSS can be regarded as typical of the Magellan region, showing affinities with those of other localities around Tierra del Fuego, the Straits of Magellan and the southern Chilean fjords.     

Odonates as Indicators of Shallow Lake Restoration by Liming: Comparing Adult and Larval Responses

Odonate assemblages were compared between replicate sets of shallow lakes that had been created and acidified by open‐cast mining across a large area (2,451 ha) of southwest France (Arjuzanx, Landes); one set of lakes (n = 5) was experimentally restored by liming with calcium carbonate, whereas another group (n = 5) was left as untreated reference lakes. Both odonate adults and exuviae were sampled bimonthly during May–August 1998. Elevated turbidity and conductivity in limed lakes were the only physicochemical measures differing between restored and reference lakes, because deacidification occurred naturally, even in reference lakes during the 17 years after the onset of restoration. Restoration by liming can apparently lead to effects on lake turbidity that might be considered adverse. Twenty‐four and 19 odonate species occurred among adults and exuviae, respectively, but there were no significant differences in richness between restored and reference sites. However, significantly, more exuviae were collected from the reference sites (588 vs. 180), where exuvial diversity and rank abundance indicated more evenly structured assemblages than those in restored lakes. Ordination showed that adult assemblages differed significantly between restored and reference lakes, and varied highly significantly with lake turbidity. This effect occurred because a small group of generally scarce adults were characteristic of reference sites (Chalcolestes viridis, Lestes virens, Cordulia aenae, Leucorrhinia albifrons, and Sympetrum sanguineum). Exuviae of these same species were less abundant at restored sites, but exuvial assemblages overall did not discriminate between restored and reference lakes. We conclude that lake restoration by liming can reduce diversity and larval numbers among odonates and subtly affects adult assemblages. In this case study, adult assemblages discriminated best between the lake types involved in the experiment, but important additional information arose from exuvial abundance and structure. This study indicates that natural recovery processes after acidification in formerly open‐cast areas––rather than chemical intervention through liming––might lead to preferable conservation outcomes.     

Habitat requirements of Tetanocera elata (Diptera: Sciomyzidae): case study of a dry meadow in western Ireland

1. Terrestrial slugs are pervasive pests of agriculture throughout temperate regions and have the potential to disrupt the germination of seedlings, cause damage to fruiting bodies of crops, and vector plant pathogens.
2. Tetanocera elata Fabricius (Diptera: Sciomyzidae), a widely distributed Palaearctic species, is an obligate mesoparasitoid and predator of pestiferous slugs including Deroceras reticulatum Müller (Stylommatophora: Agriolimacidae). It has the potential to be developed as a native natural enemy in a conservation biological control programme as an alternative to chemical molluscicides.
3. To better understand the ecological requirements of this species, a detailed observational study was conducted at a site in the west of Ireland possessing naturally occurring T. elata populations.
4. Comparison of local patches where T. elata were recovered revealed no association with plant community composition.
5. Taller dead vegetation was associated with T. elata presence throughout the site. Within the area of greatest T. elata aggregation, there was a significantly greater percentage cover of dead vegetation where T. elata occurred. Abundance of T. elata was also significantly correlated to hedgerow proximity. Results of this study are directly applicable for the design of a conservation biological control programme, which effectively satisfies the principal habitat requirements of T. elata populations.

     

Mollusc community patterns and species response curves along a mineral richness gradient: a case study in fens

Aim The goals of this study were to: (1) compare water conductivity and pH as proxy measures of mineral richness in relation to mollusc assemblages in fens, (2) examine the patterns of mollusc species richness along the gradient of mineral richness based on these factors, (3) model species–response curves and analyse calcicole–calcifuge behaviour of molluscs, and (4) compare the results with those from other studies concerning non‐marine mollusc ecology. Location Altogether, 135 treeless spring fen sites were sampled within the area of the Western Carpathians (east Czech Republic, north‐west Slovakia and south Poland; overall extent of study area was 12,000 km²). Methods Mollusc communities were recorded quantitatively from a homogeneous area of 16 m². Water conductivity and pH were measured in the field. The patterns of local species diversity along selected gradients, and species–response curves, were modelled using generalized linear models (GLM) and generalized additive models (GAM), both using the Poisson distribution. Results When the most acid sites (practically free of molluscs) were excluded, conductivity expressed the sites’ mineral richness and base saturation within the entire gradient, in contrast to pH. In the base‐rich sites, pH did not correlate with mineral richness. A unimodal response of local species diversity to mineral richness (expressed as conductivity) was found. In the extremely mineral‐rich, tufa‐forming sites (conductivity > 600 μS cm^?1) a decrease in species diversity was encountered. Response curves of the most common species showed clear differentiation of their niches. Significant models of either unimodal or monotonic form were fitted for 18 of the 30 species analysed. Species showed five types of calcicole–calcifuge behaviour: (1) a decreasing monotonic response curve and a preference for the really acid sites; (2) a skewed unimodal response curve with the optimum shifted towards the slightly acid sites; (3) a symmetrical unimodal model response curve with the optimum in the base‐rich sites, with no or slight tufa precipitation; (4) a skewed unimodal response curve but with the optimum shifted to the more mineral‐rich sites; and (5) an increasingly monotonic response curve, the optimum in the extremely base‐rich sites with strong tufa precipitation. Main conclusions Conductivity is the only reliable proxy measure of mineral richness across the entire gradient, within the confines of this study. This information is of great ecological significance in studies of fen mollusc communities. Species richness does not increase with increasing mineral richness along the entire gradient: only a few species are able to dwell in the extremely base‐rich sites. The five types of calcicole–calcifuge behaviour seen in species living in fens have a wider application: data published so far suggest they are also applicable to mollusc communities in other habitats.     

Structure of two macrolepidopteran assemblages on Salix nigra (Marsh) and Acer negundo L.: abundance,diversity, richness,and persistence of scarce species

1. Most insect species occur at low abundance but a greater research effort has been devoted to so‐called outbreak species and little research is available on scarce (low abundance) species that are typical of most insect species. 2. Larval free‐feeding macrolepidoptera of two riparian trees Salix nigra (Marsh) (black willow) and Acer negundo L. (box elder) were sampled and sorted by species and abundance. 3. Data collected established that the majority of species in the assemblages in each tree species occurred at low abundance in each of the 5 years when larvae were sampled. 4. Species in the Noctuidae and Geometridae dominated both assemblages. 5. On both trees, assemblages were dominated numerically by relatively few species, a pattern that has been observed for insect assemblages on plants in managed and unmanaged habitats.