Hydrophobins DGH1, DGH2, and DGH3 in the lichen-forming basidiomycete Dictyonema glabratum

Dictyonema glabratum is a lichen-forming basidiomycete whose symbiotic phenotype shares similarities to both lichens and its non-lichen-forming relatives. In the photobiont layer of D. glabratum intercellular gas-filled spaces are present even when the lichen is water-saturated. The walls of hyphae lining air cavities are covered by a hydrophobic, rodlet-patterned layer, assumed to be formed by hydrophobins. Hot SDS-insoluble, but trifluoroacetic acid-soluble lichen cell wall extracts contained seven proteins. The N-terminal sequence of the most abundant 14-kDa protein was used to carry out cDNA cloning by RT-PCR. The deduced amino acid sequence of the amplified fragment encoded a class I hydrophobin, called DGH1. The cDNA sequence encoding the signal peptide was cloned by RACE-PCR, which also coamplified cDNA fragments encoding two additional class I hydrophobins, DGH2 and DGH3. The three proteins share 54 to 66% amino acid identity. The D. glabratum hydrophobin extract containing either all proteins or primarily DGH1 self-assembled and formed a rodlet mosaic similar to the one observed in situ. Concentration of the protein extract was shown to influence the length of the self-assembled rodlets.     

广西地衣新记录属——炭刺文衣属

该文报道了文字衣科(Graphidaceae)地衣一广西新记录属——炭刺文衣属(Carbacanthographis).该属主要特征是子囊盘面闭合,果壳炭化,盘唇具白色粉霜层,类缘丝具疣,子囊孢子砖壁型或横隔双透镜型,I-或微I+.枯炭刺文衣,标本采自广西金秀圣堂山,该种特征是线盘明显、盘被两侧炭化、子囊孢子无色砖壁型、孢子大小(12.5-20)×(5-7.5)μm、地衣体含有水杨嗪酸.该属是中国稀有属,迄今仅有1种报道.该种首次在内陆自然环境中发现,这对于炭刺文衣属及其类群的区系研究、物种保护和利用具有很重要的意义.     

石耳属ITS条形码物种的快速鉴定

生物DNA条码是利用一个短的DNA标记进行生物的快速鉴定。以真菌界的石耳目、石耳科中的石耳属地衣的部分种类为材料,应用地衣共生菌的rDNA-ITS序列,对29种石耳属地衣进行鉴定,并初步探究其中部分种类特异的微型条码,为石耳属地衣的快速鉴定提供依据。     

十二种地卷目地衣固氮活性的种间差异

地卷目地衣是对许多生态系统的氮素循环具有重要影响的固氮类群,但其固氮活性的种间差异研究甚少。将不同产地和不同馆藏时间的12种地卷目地衣于相同条件下培养,即：亚石胶衣Collema subflaccidum、亚黑胶衣C. subnigrescens、坚韧胶衣C. tenax、裸果猫耳衣Leptogium hildenbrandii、猫耳衣L. menziesii、柄猫耳衣L. pedicellatum、土星猫耳衣L. saturninum、黑猫耳衣L. trichophorum、犬地卷Peltigera canina、分指地卷P. didactyla、裂芽地卷P. praetextata和地卷P. rufescens。以乙炔还原法（acetylene reduction assay）于培养1d、10d和15d测定其固氮活性,结果显示所有地衣的固氮活性在培养10d与15d之间差异不显著,表明经过至多10d的培养后地衣固氮活性即可完全恢复;培养10d和15d的固氮活性平均值表现出显著的种间差异（P＜0.001）：黑猫耳衣Leptogium trichophorum固氮活性最高[（4.532±0.368）μmol C2H4/gdw·h],约为犬地卷Peltigera canina的2倍[（2.349±0.223）μmol C2H4/gdw·h];其他10种地衣固氮活性大致相近。显示地衣固氮作用的可塑性较大,是地衣具有较强适应能力的又一例证。     

A DNA barcoding approach for identification of hidden diversity in Parmeliaceae (Ascomycota): Parmelia sensu stricto as a case study

Accurate specimen identification is challenging in groups with subtle or scarce taxonomically diagnostic characters, and the use of DNA barcodes can provide an effective means for consistent identification. Here, we investigate the utility of DNA barcode identification of species in a cosmopolitan genus of lichen‐forming fungi, Parmelia (Parmeliaceae). Two hundred and two internal transcribed spacer (ITS) sequences generated from specimens collected from all continents, including Antarctica, were analysed, and DNA barcodes of 14 species of Parmelia s.s. are reported. Almost all species show a barcode gap. Overall, intraspecific divergence values were lower than the threshold previously established for Parmeliaceae. However, the mean and range were elevated by deep barcode divergences in three species, indicating the likely occurrence of overlooked species‐level lineages. Here, we provide a DNA barcode reference library with well‐identified specimens sampled worldwide and sequences from most of the type material to enable easy and fast accurate sample identification and to assist in uncovering overlooked species in Parmelia s.s. Further, our results confirm the efficiency of the ITS region in the identification of species of Parmelia s.s. © 2015 The Linnean Society of London, Botanical Journal of the Linnean Society, 2016, 180 , 21–29.     

中国地衣1新记录属——珐氏衣属及其新记录种

在对中国网衣类地衣进行研究时,发现1个中国新记录属——珐氏衣属及其新记录种——微型珐氏衣。该研究利用形态学和化学的手段,对微型珐氏衣的分类学特征进行了详细描述,并提供了相关照片。     

Geographic variation in algal partners of Cladonia subtenuis (Cladoniaceae) highlights the dynamic nature of a lichen symbiosis

Multiple interacting factors may explain variation present in symbiotic associations, including fungal specificity, algal availability, mode of transmission and fungal selectivity. To separate these factors, we sampled the lichenized Cladonia subtenuis and associated Asterochloris algae across a broad geographic range. We sampled 87 thalli across 11 sites using sequence data to test for fungal specificity (phylogenetic range of association) and selectivity (frequency of association), fungal reproductive mode, and geographic structure among populations. Permutation tests were used to examine symbiont transmission. Four associated algal clades were found. Analysis of molecular variation (amova) and partial Mantel tests suggested that the frequency of associated algal genotypes was significantly different among sites and habitats, but at random with respect to fungal genotype and clade. The apparent specificity for Clade II algae in the fungal species as a whole did not scale down to further within-species lineage-dependent specificity for particular algae. Fungal genotypes were not structured according to site and appeared to be recombining. We suggest that ecological specialization exists for a specific lichen partnership and a site, and that this selectivity is dynamic and environment-dependent. We present a working model combining algal availability, fungal specificity and selectivity, which maintains variation in symbiotic composition across landscapes.