Why Are There So Many Diverse Replication Machineries?

The replicon model has initiated a major research line in molecular biology: the study of DNA replication mechanisms. Until now, the majority of studies have focused on a limited set of model organisms, mainly from Bacteria or Opisthokont eukaryotes (human, yeasts) and a few viral systems. However, molecular evolutionists have shown that the living world is more complex and diverse than believed when the operon model was proposed. Comparison of DNA replication proteins in the three domains, Archaea, Bacteria, and Eukarya, have surprisingly revealed the existence of two distinct sets of non-homologous cellular DNA replication proteins, one in Bacteria and the other in Archaea and Eukarya, suggesting that the last universal common ancestor possibly still had an RNA genome. A major puzzle is the presence in eukaryotes of the unfaithful DNA polymerase alpha (Pol α) to prime Okazaki fragments. Interestingly, Pol α is specifically involved in telomere biosynthesis, and its absence in Archaea correlates with the absence of telomeres. The recent discovery of telomere-like GC quartets in eukaryotic replication origins suggests a link between Pol α and the overall organization of the eukaryotic chromosome. As previously proposed by Takemura, Pol α might have originated from a mobile element of viral origin that played a critical role in the emergence of the complex eukaryotic genomes. Notably, most large DNA viruses encode DNA replication proteins very divergent from their cellular counterparts. The diversity of viral replication machineries compared to cellular ones suggests that DNA and DNA replication mechanisms first originated and diversified in the ancient virosphere, possibly explaining why they are so many different types of replication machinerie.     

The relationship between consumption of tyrosine and phenylalanine as precursors of catecholamine at breakfast and the circadian typology and mental health in Japanese infants aged 2 to 5 years

Background

This study aims to examine the relationship between tyrosine and phenylalanine intake at breakfast as precursors of dopamine, and scores on the Torsvall-Åkerstedt Diurnal Type Scale and of mental health in Japanese infants aged 2 to 5 years.

Results

An integrated questionnaire was administered to parents of 1,367 infants attending one of ten nursery schools governed by Kochi City or a kindergarten affiliated with the Faculty of Education at Kochi University (775 answers for analysis: 56.7%) in May and June 2008. Questionnaires included the Torsvall-Åkerstedt Diurnal Type Scale and questions on sleep habits (onset, offset, quality, quantity, and so on), meal habits (content and regularity of timing), and mental health (depressive states). Amount of tyrosine and phenylalanine intake was calculated based on a breakfast content questionnaire and data on the components of amino acids in foods. Infants who ingested more than 800 mg of tyrosine or phenylalanine at breakfast per meal were more morning-type than those who ingested less than 800 mg (ANOVA: P= 0.005). However, this relationship disappeared in the ANCOVA analysis (with the covariance of tryptophan intake, P= 0.894). Infants who ingested more than 800 mg of the two amino acids at breakfast showed significantly higher mental health scores (lower frequency of depressive states) than those who ingested less than 800 mg (ANOVA: P = 0.004). This relationship remained significant when ANCOVA analysis was performed with the covariance of tryptophan (ANCOVA: P= 0.017).

Conclusions

These results suggest that tyrosine and phenylalanine ingested at breakfast are not related with circadian phase, but are relate with mental health in infants.     

Paleodistribution modeling suggests glacial refugia in Scandinavia and out‐of‐Tibet range expansion of the Arctic fox

Quaternary glacial cycles have shaped the geographic distributions and evolution of numerous species in the Arctic. Ancient DNA suggests that the Arctic fox went extinct in Europe at the end of the Pleistocene and that Scandinavia was subsequently recolonized from Siberia, indicating inability to track its habitat through space as climate changed. Using ecological niche modeling, we found that climatically suitable conditions for Arctic fox were found in Scandinavia both during the last glacial maximum (LGM) and the mid‐Holocene. Our results are supported by fossil occurrences from the last glacial. Furthermore, the model projection for the LGM, validated with fossil records, suggested an approximate distance of 2000 km between suitable Arctic conditions and the Tibetan Plateau well within the dispersal distance of the species, supporting the recently proposed hypothesis of range expansion from an origin on the Tibetan Plateau to the rest of Eurasia. The fact that the Arctic fox disappeared from Scandinavia despite suitable conditions suggests that extant populations may be more sensitive to climate change than previously thought.     

30年泰山繁殖鸟类种类变化

泰山位于山东省中部,是华北中东部地区海拔最高的山脉,地形多样,生境复杂,是鸟类重要的繁殖地和迁徙停歇地。根据1984~1988年和2013~2015年两个时期野外调查及访谈调查结果,比较了近30年泰山繁殖鸟类种类的组成变化。相比20世纪80年代记录的繁殖鸟类13目35科72种,2013~2015年的调查记录到繁殖鸟类11目34科84种,与30年前相比净增长12种繁殖鸟类,其中新增繁殖鸟类记录32种,消失鸟类记录20种。新增种类主要是林地和灌丛鸟类,多为东洋种,消失的种类主要是湿地和农田草地鸟类,多为古北种和广布种。鸟类新增和消失的原因多样,但主要是栖息地面积和质量的改变,同时私自放生也是一个重要原因。本研究结果可丰富泰山地区随时间尺度变化的鸟类本底数据,并为泰山鸟类的保护提供科学依据。     

Higher climatic sensitivity of Scots pine (Pinus sylvestris L.) subjected to tourist pressure on a hiking trail in the Brodnica Lakeland,NE Poland

Climate condtions constitute some of the main factors affecting variation in annual tree-ring growth. However other exogenous processes including geomorphic activity can affect substantially the rate of tree growth. Currently little is known on how human activity such as trampling affects tree growth along hiking trails.We analyzed annual growth variation in 42 Scots pine trees (Pinus sylvestris L.) subjected to what is known as tourist pressure on a heavily used hiking trail in the Brodnica Lakeland located in Northeastern Poland and compared them with 45 pin. trees growing under natural conditions. Specifically, we compared the climate sensitivity of pine trees growing under trampling pressure with a pine reference site using climate variables such as mean, minimum and maximum monthly air temperature and monthly precipitation. Positive and negative pointer years for two sites were designated using the Becker algorithm and compared.Results revealed that Scots pine annual growth at both sites was highly correlated with winter (January, February) and spring (March) air temperatures and February precipitation. However, both the response function analysis and pointer year analysis revealed higher climatic sensitivity of trees subjected to trampling. It was revealed that thermal and pluvial conditions play an important role for Scots pine growth at the trampling site (PRES), especially in June and July when cambium is probably most active. At the same time, these are the months during which tourist activity is the most intense. Tree growth on a hiking trail was positively correlated with higher precipitation and lower maximum air temperature in June and July. This may indicate that pine trees subjected to trampling are threatened by a potential moisture limitation that occurs within and around the studied hiking trail due to an increase in soil compaction. Additionally, the study revealed growth reduction in pine trees subjected to trampling pressure starting from the late 1970s, i.e., right at a time when a strong increase in tourist traffic was noted across the Brodnica Lakeland.The study shows that human impact associated with trampling on hiking trails significantlly affects the growth of Scots pine and should be taken into account in future dendroecological studies.     

1990年和2019年中国心血管疾病负担及危险因素研究

摘要 目的：分析1990年和2019年中国心血管发病、死亡和疾病负担情况。方法：利用2019年全球疾病负担数据库,分析总人群、不同年龄组间1990年和2019年我国心血管发病、死亡、伤残调整寿命年（DALY）、过早死亡损失寿命年(YLL)和伤残损失寿命年(YLD)。并对心血管进行危险因素归因分析。结果：2019年中国心血管发病人数为1234.1万 ,发病率为867.65/10万,较1990年分别增长了132.82%和93.75% 。2019年死亡人数458.43万 ,死亡率为322.30/10万,较1990年分别上升了89.12%和57.39%。2019年中国心血管DALY、YLD和YLL分别为9193.31万人年、1038.39万人年和8154.93万人年。较1990年分别上升了50.07%、146.82%和45.48%。2019年发病率、死亡率和DALY率最高的年龄组均为＞70年龄组,分别为4646.78/10万、3057.82/10万和52696.68/10万。中国心血管归因于代谢危险导致的死亡人数、DALY和YLL最多,分别为3272924人、67112754人年和59934426人年。结论：我国心血管的疾病负担在1990-2019年间有较大增长,应采取积极的预防措施以减轻心血管的疾病负担。     

Tree-ring distinctness,dating potential and climatic sensitivity of laurel forest tree species in Tenerife Island

Macaronesian laurel forests are the only remnants of a subtropical palaeoecosystem dominant during the Tertiary in Europe and northern Africa. These biodiverse ecosystems are restricted to cloudy and temperate insular environments in the North Atlantic Ocean. Due to their reduced distribution area, these forests are particularly vulnerable to anthropogenic disturbances and changes in climatic conditions. The assessment of laurel forest trees’ response to climate variation by dendrochronological methods is limited because it was assumed that the lack of marked seasonality would prevent the formation of distinct annual tree rings. The aims of this study were to identify the presence of annual growth rings and to assess the dendrochronological potential of the most representative tree species from laurel forests in Tenerife, Canary Islands. We sampled increment cores from 498 trees of 12 species in two well-preserved forests in Tenerife Island. We evaluated tree-ring boundary distinctness, dating potential, and sensitivity of tree-ring growth to climate and, particularly, to drought occurrence. Eight species showed clear tree-ring boundaries, but synchronic annual tree rings and robust tree-ring chronologies were only obtained for Laurus novocanariensis, Ilex perado subsp. platyphylla, Persea indica and Picconia excelsa, a third of the studied species. Tree-ring width depended on water balance and drought occurrence, showing sharp reductions in growth in the face of decreased water availability, a response that was consistent among species and sites. Inter-annual tree-ring width variation was directly dependent on rainfall input in the humid period, from previous October to current April. The four negative pointer years 1995, 1999, 2008 and 2012 corresponded to severe drought events in the study area. This study gives the first assessment of dendrochronological potential and tree-ring climate sensitivity of tree species from the Tenerife laurel forest, which opens new research avenues for dendroecological studies in Macaronesian laurel forests.