The origin of the methyl groups of abscisic acid

(+)-Abscisic acid (ABA), biosynthesised from (±)[‴-¹⁴C,‴-³H]-mevalonolactone by avocado fruit, showed the same ¹⁴C: ³H ratio as t     

In vitro studies on the degradation of poly(cis‐1,4‐isoprene)

Cleavage of the backbone of poly(cis‐1,4‐isoprene) (IR) in solid rubber material was accomplished by the addition of partially purified latex clearing protein (Lcp1_VH2) using a 200‐mL enzyme reactor. Two strategies for the addition of Lcp1_VH2 were studied revealing that the daily addition of 50 µg mL^?1 of Lcp1_VH2 for 5 days was clearly a more efficient regime in comparison to a one‐time addition of 250 µg of Lcp1_VH2 at the beginning. Soluble oligo(cis‐1,4‐isoprene) molecules occurred as degradation products and were identified by ESI‐MS and GPC. Oxygenase activity of Lcp1_VH2 with solid IR particles as substrate was shown for the first time by measuring the oxygen consumption in the reaction medium. A strong decrease of the dissolved oxygen concentration was detected at the end of the assay, which indicates an increase in the number of cleavage reactions. The oligo(cis‐1,4‐isoprene) molecules comprised 1 to 11 isoprene units and exhibited an average molecular weight (M_n) of 885 g mol^?1. Isolation of the oligo(cis‐1,4‐isoprene) molecules was achieved by using silica gel column chromatography. The relative quantification of the isolated products was performed by HPLC‐MS after derivatization with 2,4‐dinitrophenilhydrazyne yielding a concentration of total degradation products of 1.62 g L^?1. Analysis of the polymer surface in samples incubated for 3 days with Lcp1_VH2 via ATR‐FTIR indicated the presence of carbonyl groups, which occurred upon the cleavage reaction. This study presents a cell‐free bioprocess as an alternative rubber treatment that can be applied for the partial degradation of the polymer. © 2018 American Institute of Chemical Engineers Biotechnol. Prog., 34:890–899, 2018     

Resistance of native oak to recurrent drought conditions simulating predicted climatic changes in the Mediterranean region

The capacity of a Quercus pubescens forest to resist recurrent drought was assessed on an in situ experimental platform through the measurement of a large set of traits (ecophysiological and metabolic) studied under natural drought (ND) and amplified drought (AD) induced by partial rain exclusion. This study was performed during the third and fourth years of AD, which correspond to conditions of moderate AD in 2014 and harsher AD in 2015, respectively. Although water potential (Ψ) and net photosynthesis (Pn) were noticeably reduced under AD in 2015 compared to ND, trees showed similar growth and no oxidative stress. The absence of oxidative damage could be due to a strong accumulation of α‐tocopherol, suggesting that this compound is a major component of the Q. pubescens antioxidant system. Other antioxidants were rather stable under AD in 2014, but slight changes started to be observed in 2015 (carotenoids and isoprene) due to harsher conditions. Our results indicate that Q. pubescens could be able to cope with AD, for at least 4 years, likely due to its antioxidant system. However, growth decrease was observed during the fifth year (2016) of AD, suggesting that this resistance could be threatened over longer periods of recurrent drought.     

Aerobic respiration in mutants of Escherichia coli accumulating quinone analogues of ubiquinone

The ability of three naturally occurring analogues of ubiquinone to function in aerobic respiration in Escherichia coli has been studied. The compounds, which differ from ubiquinone in terms of the substituents on the quinone ring, accumulate in the cytoplasmic membranes of ubiE^?, ubiF^? and ubiG^? mutants. One of the analogues (2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinone, MMQ), which lacks the 5-methoxyl group of the benzoquinone ring of ubiquinone promoted the oxidation of NADH, d-lactate and α-glycerophosphate but not succinate. Electron transport supported by MMQ was found to be coupled to phosphorylation. In contrast, 2-octaprenyl-6-methoxy-1,4-benzoquinone, which lacks both the 3-methyl and 5-methoxyl groups of ubiquinone, and 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinone, in which the 5-methoxyl group of ubiquinone is replaced by an hydroxyl group, were virtually inactive in the oxidases tested. The ability of MMQ to function in respiration in isolated membranes is consistent with the findings that the growth rate and yield of a ubiF^? strain, unlike other ubi^? strains, were only slightly lower than those of a ubiF⁺ strain.The fact that MMQ is active in some but not all oxidases provides further support for the concept that the quinones link the individual dehydrogenases to the respiratory chain and that each dehydrogenase has specific structural requirements for quinone acceptors.     

Role of quinones in electron transport to oxygen and nitrate in Escherichia coli. Studies with a ubiA− menA− double quinone mutant

A ubiA^? menA^? double quinone mutant of Escherichia coli K12 was constructed together with other isogenic strains lacking either ubiquinone or menaquinone. These strains were used to study the role of quinones in electron transport to oxygen and nitrate. Each of the four oxidases examined (NADH, d-lactate, α-glycerophosphate and succinate) required a quinone for activity. Ubiquinone was active in each oxidase system while menaquinone gave full activity in α-glycerophosphate oxidase, partial activity in d-lactate oxidase but was inactive in NADH and succinate oxidation. The aerobic growth rates, growth yields and products of glucose metabolism of the quinone-deficient strains were also examined. The growth rate and growth yield of the ubi⁺ menA^? strain was the same as the wild-type strain, whereas the ubiA^? men⁺ strain grew more slowly on glucose, had a lower growth yield (30% of wild type) and accumulated relatively large quantities of acetate and lactate. The growth of the ubiA^? menA^? strain was even more severely affected than that of the ubiA^? men⁺ strain.Electron transport from formate, d-lactate, α-glycerophosphate and NADH to nitrate was also highly dependent on the presence of a quinone. Either ubiquinone or menaquinone was active in electron transport from formate and the activity of the quinones in electron transport from the other substrates was the same as for the oxidase systems. In contrast, quinones were not obligatory carriers in the anaerobic formate hydrogenlyase system. It is concluded that the quinones serve to link the various dehydrogenases with the terminal electron transport systems to oxygen and nitrate and that the dehydrogenases possess a degree of selectivity with respect to the quinone acceptors.     

The Influence of Light and Temperature on Isoprene Emission Rates from Live Oak

There is a growing awareness of the role of vegetation as a source of reactive hydrocarbons that may serve as photochemical oxidant precursors. A study was designed to assess independently the influence of variable light and temperature on isoprene emissions from live oak (Quercus virginiana Mill.). Plants were conditioned in a growth chamber and then transferred to an environmentally controlled gas-exchange chamber. Samples of the chamber atmosphere were collected; isoprene was concentrated cryogenically and measured by gas chromatography. A logistic function was used to model isoprene emission rates. Under regimes of low temperature (20°C) or darkness, isoprene emissions were lowest. With increasing temperature or light intensity, the rate of isoprene emission increased, reaching maxima at 800 μE m^-2 s^-1 and 40–44°C, respectively. Higher temperatures caused a large decrease in emissions. Since the emissions of isoprene were light-saturated at moderate intensities, temperature appeared to be the main factor controlling emissions during most of the day. Carbon lost through isoprene emissions accounted for 0.1 to 2% of the carbon fixed during photosynthesis depending on light intensity and temperature.     

浙江省毛竹异戊二烯排放规律及其影响

主要对中国南方广泛分布的毛竹进行了异戊二烯排放的观测和模拟研究 ,以浙江省为例进行了毛竹异戊二烯排放量的估算 ,并将太湖流域的竹子分布与 O3浓度观测结果进行了比较 ,以期探索毛竹对区域对流层大气化学环境变化的贡献。观测结果表明毛竹是异戊二烯排放潜力较大的植被 ,其值为 1 1 6± 2 3 .4ug.g- 1.h- 1,浙江省 1 996年毛竹的异戊二烯排放量为 0 .75 9Mkg,排放在夏季达到峰值 ,其中 6、7、8三个月的排放量占全年总排放量的 5 8.9%。通过将 O3观测结果与竹林分布比较分析推断 ,农村地区 (临安 )出现的高 O3浓度可能与大面积竹林的异戊二烯排放有关。如果这种假设能够得到证明 ,将为一些农村地区大气高臭氧浓度的形成提供一种理论解释     

Is Pentane a Normal Constituent of Human Breath?

Breath analysis is a non-invasive method for investigation of the volatile compounds produced by humans. Pentane has often been taken as an indicator of lipid peroxidation. Our purpose in this study was to determine its normal concentration in the breath of healthy humans. Using a specific and sensitive gas chromatography-mass spectrometry technique pentane concentrations in breath were lower than 10 pmoles/1. The high levels of pentane found by some authors in healthy humans were probably due to the coelution of pentane with isoprene, a volatile hydrocarbon present in human breath.     

The impact of local surface changes in Borneo on atmospheric composition at wider spatial scales: coastal processes, land-use change and air quality

We present results from the OP3 campaign in Sabah during 2008 that allow us to study the impact of local emission changes over Borneo on atmospheric composition at the regional and wider scale. OP3 constituent data provide an important constraint on model performance. Treatment of boundary layer processes is highlighted as an important area of model uncertainty. Model studies of land-use change confirm earlier work, indicating that further changes to intensive oil palm agriculture in South East Asia, and the tropics in general, could have important impacts on air quality, with the biggest factor being the concomitant changes in NO(x) emissions. With the model scenarios used here, local increases in ozone of around 50 per cent could occur. We also report measurements of short-lived brominated compounds around Sabah suggesting that oceanic (and, especially, coastal) emission sources dominate locally. The concentration of bromine in short-lived halocarbons measured at the surface during OP3 amounted to about 7 ppt, setting an upper limit on the amount of these species that can reach the lower stratosphere.     

Isoprene emissions from plants are mediated by atmospheric CO2 concentrations

The tropical African tree species Acacia nigrescens Oliv. was grown in environmentally controlled growth chambers at three CO₂ concentrations representative of the Last Glacial Maximum (～180 ppmv), the present day (～380 ppmv), and likely mid‐21st century (～600 ppmv) CO₂ concentrations. Isoprene (C₅H₈) emissions, per unit leaf area, were greater at lower‐than‐current CO₂ levels and lower at higher‐than‐current CO₂ levels relative to controls grown at 380 ppmv CO₂. Changes in substrate availability and isoprene synthase (IspS) activity were identified as the mechanisms behind the observed leaf‐level emission response. In contrast, canopy‐scale emissions remained unaltered between the treatments as changes in leaf‐level emissions were offset by changes in biomass and leaf area. Substrate concentration and IspS activity‐CO₂ responses were used in a biochemical model, coupled to existing isoprene emission algorithms, to model isoprene emissions from A. nigrescens grown for over 2 years at three different CO₂ concentrations. The addition of the biochemical model allowed for the use of emission factors measured under present day CO₂ concentrations across all three CO₂ treatments. When isoprene emissions were measured from A. nigrescens in response to instantaneous changes in CO₂ concentration, the biochemical model satisfactorily represented the observed response. Therefore, the effect of changes in atmospheric CO₂ concentration on isoprene emission at any timescale can be modelled and predicted.