基于结构方程模型的吴起县农业生态经济系统耦合关系

基于2008年吴起县农户调查资料,利用结构方程模型对吴起县农业生态经济系统耦合关系进行了分析.结果表明：具有相关关系的农业资源和产业态势对系统耦合有一定影响,其影响系数分别为0.14和1.00;农业资源与产业态势之间的相关系数为-0.11,说明吴起县的产业发展并非建立在对农业资源有效利用基础之上,农业资源对经济效益的变化没有直接作用;产业的发展主要建立在对农业资源之外的能量和物质的开发利用上,导致产业态势对经济效益的直接路径系数为-2.95,总的路径系数仅为0.23.从农业生态系统与经济系统的关系及其耦合的角度看,目前研究区农业系统建立在不稳定的、较少依赖于本系统资源的耦合态势下,即在农业生态经济系统良性耦合机制的建立与形成过程中潜伏了较大危机.为此,需要提高牧草等农业资源的利用率,发展林草及其相关产业.     

Breeding ecology of the Seychelles Black Parrot Coracopsis barklyi

Knowledge of breeding ecology is required for many conservation interventions. The Seychelles Black Parrot Coracopsis barklyi, endemic to the island of Praslin, is vulnerable to extinction. We aimed to improve understanding of C. barklyi breeding ecology to aid conservation planning. We present the results of four years of research, including nesting cavity characteristics and availability, reproductive success, breeding parameters, parental behaviour and reproductive strategy. Thirty-six breeding attempts were studied over the four seasons. Nests were mainly located in Coco de Mer palms Lodoicea maldivica. Deeper cavities with more canopy cover were preferred. There may be a shortage of high-quality nesting cavities in intensive breeding seasons. Average clutch size was 2.2 eggs, incubation period was c. 15 d and egg fertility was 71%. Rats were key nest predators, causing the failure of up to 33% of breeding attempts. The probability of nest success was 53%. At least 57% of fledglings survived their first year. This species breeds cooperatively and practices a highly unusual side-by-side copulation. We discuss the implications of the results in the context of former, ongoing and potential conservation measures for C. barklyi including translocation, invasive species management, nest box provisioning, habitat restoration and further research.     

脑胶质瘤患者组织和血清MGMT、hMLH1和hMSH2基因启动子甲基化状态检测

目的探讨脑胶质瘤患者组织和血清中MGMT、hMLH1和hMSH2基因启动子CpG岛甲基化发生率及相关性。方法甲基化特异性PCR（MSP）检测39例脑胶质瘤组织样本及32例预处理的脑胶质瘤血清样本中MGMT、hMLH1和hMSH2基因启动子区的甲基化状态。结果脑胶质瘤组织MGMT、hMLH1和hMSH2基因启动子区甲基化发生率分别为46．2％、10．3％和20．5％,肿瘤组织中至少有一种基因甲基化的发生率为64．1％（25／39）;在脑胶质瘤患者外周循环血液中检测到了相关基因甲基化系列,并且与组织中基因甲基化发生率明显相关。结论MGMT、hMLH1和hMSH2基因启动子甲基化是脑胶质瘤发生过程中常见的分子事件,血清中相关基因DNA甲基化检测有可能为脑胶质瘤诊断和个体化化疗提供一种稳定的无创性检测指标。     

High Resolution Electron Microscopy of the Helicobacter pylori Cag Type IV Secretion System Pili Produced in Varying Conditions of Iron Availability

Helicobacter pylori is a helical-shaped, gram negative bacterium that colonizes the human gastric niche of half of the human population^1,2. H. pylori is the primary cause of gastric cancer, the second leading cause of cancer-related deaths worldwide³. One virulence factor that has been associated with increased risk of gastric disease is the Cag-pathogenicity island, a 40-kb region within the chromosome of H. pylori that encodes a type IV secretion system and the cognate effector molecule, CagA^4,5. The Cag-T4SS is responsible for translocating CagA and peptidoglycan into host epithelial cells^5,6. The activity of the Cag-T4SS results in numerous changes in host cell biology including upregulation of cytokine expression, activation of proinflammatory pathways, cytoskeletal remodeling, and induction of oncogenic cell-signaling networks^5-8. The Cag-T4SS is a macromolecular machine comprised of sub-assembly components spanning the inner and outer membrane and extending outward from the cell into the extracellular space. The extracellular portion of the Cag-T4SS is referred to as the “pilus”⁵. Numerous studies have demonstrated that the Cag-T4SS pili are formed at the host-pathogen interface^9,10. However, the environmental features that regulate the biogenesis of this important organelle remain largely obscure. Recently, we reported that conditions of low iron availability increased the Cag-T4SS activity and pilus biogenesis. Here we present an optimized protocol to grow H. pylori in varying conditions of iron availability prior to co-culture with human gastric epithelial cells. Further, we present the comprehensive protocol for visualization of the hyper-piliated phenotype exhibited in iron restricted conditions by high resolution scanning electron microscopy analyses.     

Comparative Analysis of argK-tox Clusters and Their Flanking Regions in Phaseolotoxin-Producing Pseudomonas syringae Pathovars

DNA fragments containing argK-tox clusters and their flanking regions were cloned from the chromosomes of Pseudomonas syringae pathovar (pv.) actinidiae strain KW-11 (ACT) and P. syringae pv. phaseolicola strain MAFF 302282 (PHA), and then their sequences were determined. Comparative analysis of these sequences and the sequences of P. syringae pv. tomato DC3000 (TOM) (Buell et al., Proc Natl Acad Sci USA 100:10181–10186, 2003) and pv. syringae B728a (SYR) (Feil et al., Proc Natl Acad Sci USA 102:11064–11069, 2005) revealed that the chromosomal backbone regions of ACT and TOM shared a high similarity to each other but presented a low similarity to those of PHA and SYR. Nevertheless, almost-identical DNA regions of about 38 kb were confirmed to be present on the chromosomes of both ACT and PHA, which we named “tox islands.” The facts that the GC content of such tox islands was 6% lower than that of the chromosomal backbone regions of P. syringae, and that argK-tox clusters, which are considered to be of exogenous origin based on our previous studies (Sawada et al., J Mol Evol 54:437–457, 2002), were confirmed to be contained within the tox islands, suggested that the tox islands were an exogenous, mobile genetic element inserted into the chromosomes of P. syringae strains. It was also predicted that the tox islands integrated site-specifically into the homologous sites of the chromosomes of ACT and PHA in the same direction, respectively, wherein 34 common gene coding sequences (CDSs) existed. Furthermore, at the left end of the tox islands were three CDSs, which encoded polypeptides and had similarities to the members of the tyrosine recombinase family, suggesting that these putative site-specific recombinases were involved in the recent horizontal transfer of tox islands. Electronic Supplementary Material Electronic Supplementary material is available for this article at and accessible for authorised users.     

Cool birds: facultative use by an introduced species of mechanical air conditioning systems during extremely hot outdoor conditions

Rapid climate change across the globe is having dramatic effects on wildlife. Responses of organisms to shifting thermal conditions often include physiological and behavioural accommodations, but to date these have been largely viewed and studied as naturally evolved phenomena (e.g. heat avoidance, sweating, panting) and not necessarily as strategies where animals exploit other anthropogenic conditions or resources. Moreover, the degree to which native versus introduced species show thermal plasticity has generated much conservation and ecological interest. We previously have observed introduced rosy-faced lovebirds (Agapornis roseicollis) perching in the relief-air vents on building faces in the Phoenix, Arizona, USA, metropolitan area, but doing so only during summer. Here, we show that such vent-perching events are significantly associated with extreme outdoor summer temperatures (when daily local highs routinely exceed 40°C). In fact, the temperature threshold at which we detected lovebirds starting to perch in cool air vents mirrors the upper range of the thermoneutral zone for this species. These results implicate novel, facultative use of an anthropogenic resource—industrial air-conditioning systems—by a recently introduced species (within the last 35 years) to cool down and survive extremely hot conditions in this urban ‘heat-island'' environment.     

绿色基础设施的生态及社会功能研究进展

随着城市化进程的加快,城市硬化地表不断挤占透水表面,使得绿色基础设施规模不断下降、破碎化程度逐渐加大,严重影响了绿色基础设施服务功能的有效发挥。绿色基础设施的发展经历了早期萌芽、初步形成和快速发展三个阶段,主要在宏观尺度研究区域生态安全,中观尺度促进城市可持续发展,微观尺度解决社区生态环境问题。目前绿色基础设施的研究内容集中在其生态功能和社会功能两个方面,主要关注调蓄降雨径流、消减非点源污染、调节区域微气候、居民健康与福祉和空间布局公平性。而供需结构的合理配置也是决定绿色基础设施服务水平的关键因素。未来的研究应加强与相关学科的交叉融合,完善绿色基础设施功能的测度与评估方法,将绿色基础设施建设与实际规划相结合,以期为区域可持续发展和国家生态文明建设提供支撑与保障。     

The impacts of introduced House Mice on the breeding success of nesting seabirds on Gough Island

Invasive species are the main threat to island biodiversity; seabirds are particularly vulnerable and are one of the most threatened groups of birds. Gough Island, a UNESCO World Heritage Site in the South Atlantic Ocean, is an Important Bird and Biodiversity Area, and one of the most important seabird colonies globally. Invasive House Mice Mus musculus depredate eggs and chicks of most seabird species on the island, but the extent of their impact has not been quantified. We used field data and bootstrapped normal distributions to estimate breeding success and the number of surviving chicks for 10 seabird species on Gough Island, and compared estimates with those of analogous species from predator‐free islands. We examined the effects of season and nest‐site location on the breeding success of populations on Gough Island, predicting that the breeding success of Gough birds would be lower than that of analogues, particularly among small burrow‐nesting species. We also predicted that winter‐breeding species would exhibit lower breeding success than summer‐breeding species, because mice have fewer alternative food sources in winter; and below‐ground nesters would have lower breeding success than surface nesters, as below‐ground species are smaller so their chicks are easier prey for mice. We did indeed find that seabirds on Gough Island had low breeding success compared with analogues, losing an estimated 1 739 000 (1 467 000–2 116 000) eggs/chicks annually. Seven of the 10 focal species on Gough Island had particularly high chick mortality and may have been subject to intense mouse predation. Below‐ground and winter breeders had lower breeding success than surface‐ and summer‐breeders. MacGillivray's Prion Pachyptila macgillivrayi, Atlantic Petrel Pterodroma incerta and Tristan Albatross Diomedea dabbenena are endemic or near‐endemic to Gough Island and are likely to be driven to extinction if invasive mice are not removed.     

土壤有机质转化及CO2释放的温度效应研究进展

土壤有机质转化对温度变化的响应,是气候变暖与全球碳循环关系中的核心问题.掌握土壤有机质对温度变化的响应规律,对准确评价气候变暖背景下,全球土壤有机质的转化至关重要.综述了国内外大量研究成果,对基质成分、基质损耗、测试方法、微生物、水分含量等因素,对土壤有机质转化与温度关系的影响机理与影响规律以及Q10的变化规律进行了探讨.提出稳定有机质与不稳定有机质温度敏感性异同问题,应作为土壤有机质转化与温度关系中的核心问题进行深入研究.同时通过分析,提出室内短期培养是首选测试方法.分析认为微生物生长温度曲线与微生物呼吸之间不存在必然联系,而在过低和过高之间,水分含量是否会影响土壤呼吸,有待进一步试验验证.提出随着城市热岛效应这一环境问题的加剧,研究及评价更大温度区间内的城市土壤有机质对温度变化的响应规律十分重要.     

Habitat amount hypothesis and passive sampling explain mammal species composition in Amazonian river islands

Nested structures of species assemblages have been frequently associated with patch size and isolation, leading to the conclusion that colonization–extinction dynamics drives nestedness. The ‘passive sampling’ model states that the regional abundance of species randomly determines their occurrence in patches. The ‘habitat amount hypothesis’ also challenges patch size and isolation effects, arguing that they occur because of a ‘sample area effect’. Here, we (a) ask whether the structure of the mammal assemblages of fluvial islands shows a nested pattern, (b) test whether species’ regional abundance predicts species’ occurrence on islands, and (c) ask whether habitat amount in the landscape and matrix resistance to biological flow predict the islands’ species composition. We quantified nestedness and tested its significance using null models. We used a regression model to analyze whether a species’ relative regional abundance predicts its incidence on islands. We accessed islands’ species composition by an NMDS ordination and used multiple regression to evaluate how species composition responds to habitat amount and matrix resistance. The degree of nestedness did not differ from that expected by the passive sampling hypothesis. Likewise, species’ regional abundance predicted its occurrence on islands. Habitat amount successfully predicted the species composition on islands, whereas matrix resistance did not. We suggest the application of habitat amount hypothesis for predicting species composition in other patchy systems. Although the island biogeography perspective has dominated the literature, we suggest that the passive sampling perspective is more appropriate for explaining the assemblages’ structure in this and other non‐equilibrium patch systems. Abstract in Portuguese is available with online material.