鸡减蛋综合征病毒(EDSV)基因组右末端结构的分析

从中国发病鸡中分离的鸡减蛋综合征病毒（ＥｇｇＤｒｏｐＳｙｎｄｒｏｍＶｉｒｕｓ,ＥＤＳＶ）弱毒株（ＡＡ－２）,其基因组全长约为３３ｋｂ。用限制性内切酶ＨｉｎｄⅢ水解ＥＤＳＶ全基因组,构建了以ｐＢｌｕｅｓｃｒｉｐｔⅡ（ＫＳ＋）为载体的右末端片段的克隆（约４．２ｋｂ）,对其进行了序列测定和结构分析。该片段全长４１８３个碱基对（ｂｐ）,位于基因组右末端８７．３ｍ．ｕ．－１００ｍ．ｕ．。结果显示,该片段与哺乳动物腺病毒右末端Ｅ４区结构不同,与禽Ⅰ型腺病毒代表株ＣＥＬＯ右末端片段亦无同源性。本文为深入了解ＥＤＳＶ基因组结构特点,ＥＤＳＶ与其他腺病毒基因结构与功能的进化关系和ＥＤＳＶ载体的构建奠定了分子生物学基础     

Detection of Short Protein Coding Regions within the Cyanobacterium Genome: Application of the Hidden Markov Model

The gene-finding programs developed so far have not paid muchattention to the detection of short protein coding regions (CDSs).However, the detection of short CDSs is important for the studyof photosynthesis. We utilized GeneHacker, a gene-finding programbased on the hidden Markov model (HMM), to detect short CDSs(from 90 to 300 bases) in a 1.0 mega contiguous sequence ofcyanobacterium Synechocystis sp. strain PCC6803 which carriesa complete set of genes for oxygenic photosynthesis. GeneHackerdiffers from other gene-finding programs based on the HMM inthat it utilizes di-codon statistics as well. GeneHacker successfullydetected seven out of the eight short CDSs annotated in thissequence and was clearly superior to GeneMark in this rangeof length. GeneHacker detected 94 potentially new CDSs, 9 ofwhich have counterparts in the genetic databases. Four of thenine CDSs were less than 150 bases and were photosynthesis-relatedgenes. The results show the effectiveness of GeneHacker in detectingvery short CDSs corresponding to genes.     

period基因的Thr—Gly区段在果蝇和部分双翅目昆虫中的分子进化特征

以亲缘关系极近的近缘种类群、中等距离的远缘种类群为对象,分析生物钟基因period的Thr-Gly区段的分子进化特征,发现Thr-Gly区段在果蝇和部分双翅目昆虫中未曾经历性选择和其他定向的正选择。Thr-Gly区段在果蝇nasuta亚群中的分子进化速率为10.4×10     

Evidence for genotypic differences between the two siderovars of Pseudomonas tolaasii,cause of brown blotch disease of the cultivated mushroom Agaricus bisporus

Sixteen representative isolates of Pseudomonas tolaasii, the causal agent of brown blotch of the cultivated mushroom Agaricus bisporus, were previously assigned to two siderovars (sv1 and sv2) on the basis of pyoverdines synthesized. Each isolate was pathogenic and produced a typical white line precipitate when cultured adjacent to Pseudomonas "reactans" strain LMG 5329. These 16 isolates of P. tolaasii, representing sv1 and sv2, were further characterized using genotypic methods to examine the relationships between the isolates. Rep-PCR studies revealed two distinct patterns from these isolates, which were consistent with the siderovar grouping. Ribotyping differentiated P. tolaasii LMG 2342T (sv1) and PS 3a (sv2) into two distinct ribotypes. A pair of primers, targeted to a 2.1-kb fragment of tl1 (encoding a tolaasin peptide synthetase), yielded the same PCR product from P. tolaasii LMG 2342T (sv1) and PS 22.2 (sv1), but not from PS 3a (sv2). Southern blot analysis indicated that homologues of tl1 are present in PS 3a, but the pattern of hybridization differed from PS 22.2 and LMG 2342T. Sequence determination and analysis of the internally transcribed spacer region ITSI for P. tolaasii LMG 2342T, LMG 6641, and PS 3a strains further supported the presence of the two siderovars. It is concluded that considerable genotypic differences exist among Finnish isolates of P. tolaasii causing brown blotch disease on the cultivated mushroom, which is in agreement with the phenotypic diversity highlighted through previous siderotyping studies.     

陕北黄土丘陵沟壑区坡沟立地环境下幼苗的存活特征

幼苗是植被恢复演替的基础, 在生态系统中具有非常重要的作用。为了探索黄土丘陵沟壑区坡沟立地环境下幼苗的存活特征, 在陕西省安塞县宋家沟和纸坊沟流域设置15个固定样地进行定点动态监测, 运用单因素方差分析法和系统聚类分析法对不同立地环境下的幼苗密度和幼苗存活率进行了分析。结果表明: 1)不同坡沟立地环境下, 幼苗存活特征差异明显, 整体表现为阳坡幼苗密度较小而存活率较高, 阴坡幼苗密度较大但存活率较低。2)细裂叶莲蒿(Artemisia gmelinii)、菊叶委陵菜(Potentilla tanacetifolia)、阿尔泰狗娃花(Heteropappus altaicus)等物种具有较高的幼苗存活率, 在生存竞争中幼苗是以“质”取胜; 而猪毛蒿(Artemisia scoparia)、中华苦荬菜(Ixeris chinensis)、阴行草(Siphonostegia chinensis)等物种具有较高的幼苗密度, 在生存竞争中是以“量”取胜。3)同一物种在坡沟立地环境下表现出不同的存活曲线, 不同物种在不同立地环境下也可呈现同一存活曲线; 细裂叶莲蒿、菊叶委陵菜、长芒草(Stipa bungeana)、阿尔泰狗娃花、兴安胡枝子(Lespedeza davurica)等物种, 幼苗不仅在雨季存活能力强且具有较强的越冬能力; 猪毛蒿、香青兰(Dracocephalum moldavica)、臭蒿(Artemisia hedinii)等物种在雨季前幼苗存活能力较强, 但冬季存活能力弱。4)坡面不同微环境下幼苗存活特征也存在差异, 即微环境的改变在一定程度上影响着幼苗的生长、存活和越冬。因此, 在黄土丘陵沟壑区应根据物种幼苗存活特性对幼苗进行适当的抚育管理, 这将有利于幼苗的建植和植被更新。     

肾素(原)受体在大鼠肾小球系膜细胞和肾脏的表达

近年发现的肾素（原）受体（renin／prorenin receptor,RnR）已被证明具有生物学功能,在心、肾及多种细胞表达。本文旨在观察RnR在体外培养的大鼠肾小球系膜细胞（mesangial cells,MCs）和肾脏中是否表达,及其表达的细胞部位,并用RnR的多肽阻断剂肾素原“柄区肽”（handle region peptide,HRP）与RnR结合后观察受体复合物进入细胞的过程与定位。结果显示,RnR主要存在于大鼠肾脏皮质肾小球系膜区和体外培养的MCs的细胞核周围胞浆和细胞膜。将FITC标记的HRP（FITC-HRP）加入细胞培养液后30S到30min期间,可观察到FITC-HRP由培养液转移到胞浆内并进入细胞核。用免疫荧光和激光共聚焦技术观察到,HRP与RnR的共定位主要位于细胞膜和细胞核周围胞浆;在30min时,一部分HRP已进入细胞核,而RnR没有进入细胞核内,仍主要位于细胞核周围胞浆。上述结果提示,RnR与其配基结合后进入细胞内并发挥生物学效应。     

Identification of glyoxalase 1 polymorphisms associated with enzyme activity

The glyoxalase system and its main enzyme, glyoxalase 1 (GLO1), protect cells from advanced glycation end products (AGEs), such as methylglyoxal (MG) and other reactive dicarbonyls, the formation of which is increased in diabetes patients as a result of excessive glycolysis. MG is partly responsible for harmful protein alterations in living cells, notably in neurons, leading to their dysfunction, and recent studies have shown a negative correlation between GLO1 expression and tissue damage. Neuronal dysfunction is a common diabetes complication due to elevated blood sugar levels, leading to high levels of AGEs. The aim of our study was to determine whether single nucleotide polymorphisms (SNPs) in the GLO1 gene influence activity of the enzyme. In total, 125 healthy controls, 101 type 1 diabetes, and 100 type 2 diabetes patients were genotyped for three common SNPs, rs2736654 (A111E), rs1130534 (G124G), and rs1049346 (5′-UTR), in GLO1. GLO1 activity was determined in whole blood lysates for all participants of the study.     

藜麦及其资源开发利用

藜麦Chenopodium quinoa Willd.英文名:quinoa,原产于南美洲安第斯山区,是印加土著居民的主要传统食物,至今已有5 000~7 000多年的利用和种植历史。古代印加人将它称之为"粮食之母"。藜麦在20世纪80年代,被美国宇航局用于宇航员的太空食品。联合国粮农组织认为藜麦是唯一的单一植物即可满足人体基本营养需求的食物,正式推荐藜麦为最适宜人类的完美的全营养食品。本文对藜麦的植物形态、生态特性、营养价值以及在我国种植展望作了综合报道。     

抗黄矮病小麦-中间偃麦草易位系基因组可转化人工染色体文库的构建及初步筛选

利用抗黄矮病小麦 -中间偃麦草易位系HW6 4 2的细胞核DNA构建了一个可转化人工染色体 (transformation competentartificialchromosome,TAC)文库 ,文库由 2 .3× 10 6 克隆构成 ,重组率为 90 .4 8% ,平均插入片段大小为 2 2kb左右 ,约覆盖普通小麦单倍体基因组 2 .5倍 ,在该文库中分离得到单拷贝DNA序列的几率约是 95 .77%。文库保存在 2 4块 96孔板中 ,每个孔中约含有 10 0 0个不同的重组克隆 ,可以采用PooledPCR的方法对文库进行筛选。用来源于小麦的简单重复序列 (simplesequencerepeat,SSR)引物wms37扩增中间偃麦草、抗病易位系及感病材料 ,得到一条与抗性共分离的特异条带 ,约 4 5 0bp。将此特异标记条带转化为SCAR(sequencecharacterizedamplifiedregion)标记 ,用于筛选HW6 4 2基因组TAC文库 ,得到 12个阳性克隆。对阳性克隆进行了PCR Southern验证 ,以中间偃麦草基因组总DNA为探针与限制酶HindⅢ消化后的阳性克隆杂交 ,其中 10个阳性克隆分别有 1～ 6条杂交带 ,结果表明 ,这 10个阳性克隆可作为抗黄矮病相关基因筛选的候选克隆     

中亚热带红壤区油桐(Vernicia fordii)林冠水文效应特征

于从2004年7月到2005年9月,对南方红壤区油桐人工林的穿透雨、树干流和林冠截留的水文特征进行了监测,并对其影响因素进行初步分析,结果表明：在整个测定期间,油桐林穿透雨占总降雨量75.6%±8.6%,树干流占3.6%±1.1%,而截留量占20.8%±9.1%。油桐林冠对降雨的再分配受到降雨量和降雨强度的影响,随着雨量的增加,穿透雨、树干流和截留量相应地提高,并且树干流和截留量在高的雨量下逐渐趋于稳定;随着降雨强度的增加,穿透雨率逐渐升高,而树干流率和截留率降低。在不同雨量级间,油桐穿透雨具有显著性的差异,但树干流的差异不显著。油桐林下水分输入存在明显的空间异质性,穿透雨在不同观测点间具有显著性差异,靠近树干的林冠内部穿透雨低于林冠边缘,而且随着降雨量或降雨强度的增加,穿透雨的空间异质性(穿透雨率的变异系数CV)降低;树干流对降雨也具有明显的汇集作用,在树干周围输入的雨量是林外降雨量20~70倍,并且随着降雨量的增加,这种汇集效应（漏斗比率）先提高后降低。同时油桐单株树干流(cm³•mm^-1)与胸径、树高和冠层面积均呈显著正相关(p<0.05),但是与枝下高的相关性不显著(p>0.05)。