High cell density induces spontaneous bifurcations of dissolved oxygen controllers during CHO cell fermentations

High cell density cultures of CHO cells growing in a bioreactor under dissolved oxygen control were found to undergo spontaneous bifurcations and a subsequent loss of stability some time into the fermentation. This loss of stability was manifested by sustained and amplified oscillations in the bioreactor dissolved oxygen concentration and in the oxygen gas flow rate to the reactor. To identify potential biological and operational causes for the phenomenon, linear stability analysis was applied in a neighborhood of the experimentally observed bifurcation point. The analysis revealed that two steady state process gains, K(P1) and K(P2), regulated k(l)a and gas phase oxygen concentration inputs, respectively, and the magnitude of K(P1) was found to determine system stability about the bifurcation point. The magnitude of K(P1), and hence the corresponding open-loop steady state gain K(OL1), scaled linearly with the bioreactor cell density, increasing with increasing cell density. These results allowed the generation of a fermentation stability diagram, which partitioned K(C)-N operating space into stable and unstable regions separated by the loci of predicted critically stable controller constants, K(C,critical), as a function of bioreactor cell density. This consistency of this operating diagram with experimentally observed changes in system stability was demonstrated. We conclude that time-dependent increases in cell density are the cause of the observed instabilities and that cell density is the critical bifurcation parameter. The results of this study should be readily applicable to the design of a more robust controller.     

Hydration, structure, and molecular interactions in the headgroup region of dioleoylphosphatidylcholine bilayers: an electron spin resonance study

The relationship between bilayer hydration and the dynamic structure of headgroups and interbilayer water in multilamellar vesicles is investigated by electron spin resonance methods. Temperature variations of the order parameter of a headgroup spin label DPP-Tempo in DOPC in excess water and partially dehydrated (10 wt % water) show a cusp-like pattern around the main phase transition, Tc. This pattern is similar to those of temperature variations of the quadrupolar splitting of interbilayer D2O in PC and PE bilayers previously measured by 2H NMR, indicating that the ordering of the headgroup and the interbilayer water are correlated. The cusp-like pattern of these and other physical properties around Tc are suggestive of quasicritical fluctuations. Also, an increase (a decrease) in ordering of DPP-Tempo is correlated with water moving out of (into) interbilayer region into (from) the bulk water phase near the freezing point, Tf. Addition of cholesterol lowers Tf, which remains the point of increasing headgroup ordering. Using the small water-soluble spin probe 4-PT, it is shown that the ordering of interbilayer water increases with bilayer dehydration. It is suggested that increased ordering in the interbilayer region, implying a lowering of entropy, will itself lead to further dehydration of the interbilayer region until its lowered pressure resists further flow, i.e., an osmotic phenomenon.     

Two uncommon phospholipase D isoenzymes from poppy seedlings (Papaver somniferum L.)

Phospholipase D (PLD) has been detected in seedlings of Papaver somniferum L. cv. Lazúr (Papaveraceae). Purification of the enzyme revealed the existence of two forms of PLD (named as PLD-A and PLD-B). The two enzymes strongly differ in their catalytic properties. The pH optima were found at pH 8.0 for PLD-A and at pH 5.5 for PLD-B. While both enzymes show hydrolytic activity toward phosphatidylcholine (PC) and phosphatidyl-p-nitrophenol (PpNP), PLD-B only was able to catalyze the exchange of choline in PC by glycerol. Both enzymes were activated by Ca²⁺ ions with an optimum concentration of 10 mM. In contrast to PLDs from other plants, PLD-B was still more activated by Zn²⁺ ions with an optimum concentration of 5 mM. The apparent molecular masses of PLD-A and PLD-B, derived from sodium dodecylsulfate polyacrylamide gel electrophoresis (SDS-PAGE), were estimated to be 116.4 and 114.1 kDa. N-terminal protein sequencing indicated N-terminal blockage in both cases. The isoelectric points were found to be 8.7 for PLD-A and 6.7 for PLD-B. Both enzymes were shown to be N-linked glycoproteins. This paper is the first report on PLD in poppy and indicates some important differences of the two enzyme forms to other PLDs known so far.     

深海白色侧齿霉遗传转化体系建立及渗透压调控相关的EaSHO1基因功能

海洋中具有丰富的动植物及微生物资源,海洋真菌是其重要组成之一。我们前期的研究发现一株深海真菌白色侧齿霉Engyodontium album能产生具有抑菌活性的次级代谢产物engyodontiumin A,该化合物能抑制黑曲霉、金黄色葡萄球菌及创伤弧菌等病原菌的生长,是一种潜在的海洋源抗菌药物。目前,该菌遗传转化体系尚未建立,不利于开展次级代谢产物合成调控机制及其他功能基因研究。本研究成功制备了深海白色侧齿霉菌的原生质体,建立了借助聚乙二醇3350介导的原生质体转化体系,并将pCT74-sGFP载体成功导入白色侧齿霉的原生质体中,结果显示外源GFP能稳定表达。此外,为了明确白色侧齿霉菌是否能够开展基因敲除研究,通过氨基酸序列同源比对,我们选取酵母高渗甘油信号途径中的同源基因EaSHO1进行初步探究。利用同源重组的方法成功将目的基因EaSHO1的开放阅读框(ORF)替换成潮霉素磷酸转移酶基因(HPH),由此获得EaSHO1基因敲除突变体,并对突变体进行Southern杂交验证及初步的表型分析。结果表明,EaSHO1缺失不影响白色侧齿霉菌的营养生长及对高盐胁迫的响应,亚细胞定位结果显示EaS...     

Invertebrate community and stream substrate responses to woody debris removal from an ice storm-impacted stream system, NY USA

We assessed the influence of ice-storm-derived debris dams on aquatic macroinvertebrates and stream substrates in a high-gradient watershed in the eastern Adirondack Mountains of New York State. Using a modification of electrofishing techniques, invertebrates were collected once before (June 2000) and once after (June 2001) wood removal from the downstream reach in each of six pairs of reaches (second and third-order streams). Stream substrates were also mapped in 2000 and 2001 to evaluate shifts in dominant substrates within a reach following wood removal. The following metrics were used to compare the invertebrate communities before and after wood removal: genera similarity, Shannon–Weiner equitability, taxa richness, dominant taxon, percent dominance and functional feeding group relative abundance. The changes in removal reaches were evaluated relative to changes in upstream reference reaches using a Before-After Control-Impact (BACI) design and analysis. Stream substrates did not change significantly in response to wood removal, although a trend toward coarser substrates was observed following removal. Following wood removal, the relative proportion of grazers increased upstream and downstream from removed dams in all streams; however, comparisons of other metrics indicated no significant response to removal. Invertebrate responses to wood removal were lower than expected, perhaps due to the presence of abundant boulder-formed pools in this high gradient system. Electronic supplementary material Electronic supplementary material is available for this article at and accessible for authorised users.     

短时高温对烟蚜生长发育、繁殖和取食行为的影响

【目的】烟蚜Myzus persicae是一种世界性的重要农业害虫,本研究测定了短时高温对烟蚜生长发育、繁殖和取食行为的影响。【方法】测定初产若蚜每天在30, 35和40℃下处理1, 2和4 h的发育历期及成蚜在相同处理下的繁殖力,应用刺吸电位技术（electronic penetration graph, EPG）测定成蚜在30和35℃下处理1和2 h后以及在25, 28, 30和35℃恒温下的取食行为。【结果】短时高温（30~35℃）对各龄若蚜发育历期影响较小,但40℃下处理2 h后其发育历期显著增加（P<0.05）;若蚜存活率、成蚜寿命及其繁殖历期随温度和处理时间的增加而降低;在25~35℃下,随温度和处理时间的增加,成蚜繁殖率变化较小,但40℃下处理2和4 h后,其繁殖率显著降低（P< 0.01）;短时高温对烟蚜的取食行为影响显著,随温度和处理时间的增加,非刺探波np数量（P<0.05）及其持续时间（P<0.01）显著减少,而韧皮部刺吸波E持续时间显著增加（P<0.05）;但持续高温下,随温度升高,np波数量及其持续时间先减少后增加,而E波则相反。【结论】短时高温对烟蚜若蚜发育速率影响较小,但使若蚜存活率、成蚜寿命及其繁殖历期显著降低,且对成蚜繁殖有一定的抑制作用,而对成蚜的取食有一定的促进作用。研究结果有助于了解烟蚜不同年份间夏季种群数量的变化机制。     

采用高效液相色谱技术分析烟草体内的维生素B6化合物

维生素B6 (VB6)是一类化合物的总称.近年来研究发现VB6在植物体内发挥抗逆作用.烟草作为模式植物其体内VB6的存在形态还未见报道.本研究采用高效液相色谱结合荧光检测技术对烟草体内VB6的存在形态进行了分析.结果表明:土壤栽培烟草叶、茎和根中VB6的含量依次为2.9、1.7、3.0 μg/g鲜重;组培烟草叶片的VB...     

Structural similarities among the high molecular weight protein fractions of oilseeds

Data on the physico-chemical properties of proteins from soybean, groundnut, sesame seed, sunflower seed, safflower seed, mustard seed, rapeseed and cotton seed are fairly extensive. An examination of the available data on high molecular weight proteins suggests that there are similarities in many of their properties. In this report the similarity in amino acid composition, size and shape, molecular weight, secondary structure, subunit composition, association-dissociation at high and low pH, stability towards denaturants, hydrolysis by enzymes and quaternary structure of the high molecular weight proteins is discussed. Based on these similarities a model has been proposed for the associationdissociation, denaturation and reassociation behaviour of the high molecular weight proteins of oilseeds.     

Ascorbate in thylakoid lumen as an endogenous electron donor to Photosystem II: Protection of thylakoids from photoinhibition and regeneration of ascorbate in stroma by dehydroascorbate reductase

Photoinhibition of the electron transport activity from tyrosine Z (Y_Z) in PS II to NADP⁺in Tris-treated thylakoids was suppressed by electron donation with either diphenylcarbazide or ascorbate (AsA) during the photoinhibition treatment. This suggests that AsA prevents donor side-induced photoinhibition in vivo as an endogenous donor. AsA in the lumen is photooxidized to monodehydroascorbate (MDA) in Tris-treated thylakoids, as detected by electron spin resonance spectrometry, but not in oxygenic thylakoids. Redox analysis of pyridine nucleotide in the presence of either MDA reductase or dehydroascorbate (DHA) reductase showed that the MDA photoproduced in the lumen is disproportionated to AsA and DHA, and the DHA leaking into the stroma is reduced to AsA by DHA reductase. No leakage of MDA through the thylakoid membrane was observed. Thus, the DHA-reducing enzyme system is indispensable in maintaining AsA concentrations in chloroplasts.