Genomic and phenomic analysis of island ant community assembly

Island biodiversity has long fascinated biologists as it typically presents tractable systems for unpicking the eco‐evolutionary processes driving community assembly. In general, two recurring themes are of central theoretical interest. First, immigration, diversification, and extinction typically depend on island geographical properties (e.g., area, isolation, and age). Second, predictable ecological and evolutionary trajectories readily occur after colonization, such as the evolution of adaptive trait syndromes, trends toward specialization, adaptive radiation, and eventual ecological decline. Hypotheses such as the taxon cycle draw on several of these themes to posit particular constraints on colonization and subsequent eco‐evolutionary dynamics. However, it has been challenging to examine these integrated dynamics with traditional methods. Here, we combine phylogenomics, population genomics and phenomics, to unravel community assembly dynamics among Pheidole (Hymenoptera, Formicidae) ants in the isolated Fijian archipelago. We uphold basic island biogeographic predictions that isolated islands accumulate diversity primarily through in situ evolution rather than dispersal, and population genomic support for taxon cycle predictions that endemic species have decreased dispersal ability and demography relative to regionally widespread taxa. However, rather than trending toward island syndromes, ecomorphological diversification in Fiji was intense, filling much of the genus‐level global morphospace. Furthermore, while most endemic species exhibit demographic decline and reduced dispersal, we show that the archipelago is not an evolutionary dead‐end. Rather, several endemic species show signatures of population and range expansion, including a successful colonization to the Cook islands. These results shed light on the processes shaping island biotas and refine our understanding of island biogeographic theory.     

叶面喷施亚精胺对高温胁迫下番茄叶绿素合成代谢的影响

以设施番茄栽培品种‘金棚朝冠’幼苗为试验材料,研究叶面喷施0.25 mmol·L~(-1)亚精胺(Spd)对高温胁迫下(38℃/28℃,昼/夜)番茄幼苗生长及叶绿素合成过程中前体物质含量、关键酶活性和叶绿素含量的影响,探讨Spd缓解番茄高温胁迫伤害的生理机制。结果表明:(1)高温胁迫显著抑制了番茄幼苗的生长,叶面喷施Spd可有效缓解高温胁迫对番茄幼苗地上部生长的抑制作用,但对于地下部的生长无显著缓解作用。(2)高温胁迫下番茄叶片叶绿素合成前体物质δ-氨基酮戊酸(ALA)和胆色素原(PBG)的含量显著提高,而尿卟啉原Ⅲ(UroⅢ)、原卟啉Ⅸ(ProtoⅨ)、镁-原卟啉Ⅸ(Mg-protoⅨ)和原叶绿素酸(Pchl)的含量显著降低,证明叶绿素前体由PBG向UroⅢ的转化受阻,导致叶绿素a(Chla)、总叶绿素(Chlt)含量和Chla/Chlb显著降低。(3)叶面喷施Spd能增强高温胁迫下胆色素原脱氨酶(PBGD)活性,有效缓解了高温胁迫对PBG到UroⅢ转化的阻碍作用,促进PBG之后叶绿素合成前体物质的合成,Chla含量和Chla/Chlb显著增加。研究发现,高温胁迫显著抑制番茄幼苗的生长,叶面喷施Spd可通过显著增强PBGD活性来缓解由PBG向UroⅢ的受阻程度,促进高温胁迫下番茄叶片的叶绿素前体合成,提高叶绿素含量和番茄植株的生长量,减轻高温胁迫对番茄幼苗生长的伤害。     

Study of the independent gametophytes found on Jeju Island in South Korea and the first record of the obligate independent gametophyte of Antrophyum obovatum Baker

Fern gametophytes have often been neglected in research; however, studies on gametophytes are crucial for a better understanding of the evolution of ferns. During their life cycle, some gametophytes produce large and long‐lived populations without producing sporophytes and reproduce independently through asexual means, such as through the formation of gemmae. In this study, we investigated independent gametophytes on the Jeju Island of Korea, which was located on the land bridge between East China and Japan during the glacial periods. Fourteen gametophyte populations were collected from seven sites, of which 13 populations were clearly identified as belonging to four fern species known to occur in Jeju Island with BLAST searches using rbcL and trnL‐F sequences. Surprisingly, the last remaining population constituted undescribed taxa in Korea. We presented the first report of the independent gametophytes of Antrophyum obovatum Baker which has not been previously recorded in Korea. It has been supposed that many ferns sought suitable habitat throughout the land bridge between China and Japan. However, Jeju Island might be unsuitable for vittarioid ferns that prefer a tropical or subtropical environment. Consequently, only two species of vittariod ferns (A. obovatum and Haplopteris flexuosa (Fée) E.H. Crane) in the form of a gametophyte and sporophyte, respectively, exist on Jeju Island. Therefore, this gametophyte population must be protected and managed from a conservation perspective. In the case of the independent gametophyte of Hymenophyllum wrightii Bosch, haplotype analysis was conducted based on the rbcL sequences and the result supported that the North American populations were migrated from Japan through land bridge during the glacial periods and Jeju populations were recently established by long‐distance dispersal of the Japanese populations.     

An Experimental Test of Adaptive Introgression in Locally Adapted Populations of Splash Pool Copepods

As species struggle to keep pace with the rapidly warming climate, adaptive introgression of beneficial alleles from closely related species or populations provides a possible avenue for rapid adaptation. We investigate the potential for adaptive introgression in the copepod, Tigriopus californicus, by hybridizing two populations with divergent heat tolerance limits. We subjected hybrids to strong heat selection for 15 generations followed by whole-genome resequencing. Utilizing a hybridize evolve and resequence (HER) technique, we can identify loci responding to heat selection via a change in allele frequency. We successfully increased the heat tolerance (measured as LT₅₀) in selected lines, which was coupled with higher frequencies of alleles from the southern (heat tolerant) population. These repeatable changes in allele frequencies occurred on all 12 chromosomes across all independent selected lines, providing evidence that heat tolerance is polygenic. These loci contained genes with lower protein-coding sequence divergence than the genome-wide average, indicating that these loci are highly conserved between the two populations. In addition, these loci were enriched in genes that changed expression patterns between selected and control lines in response to a nonlethal heat shock. Therefore, we hypothesize that the mechanism of heat tolerance divergence is explained by differential gene expression of highly conserved genes. The HER approach offers a unique solution to identifying genetic variants contributing to polygenic traits, especially variants that might be missed through other population genomic approaches.     

Le Paléolithique supérieur dans l’île d’Hokkaïdo

Since the discovery of the first Paleolithic site in Hokkaido, we consider that the time in the half more than centuries already passed, and float today. However, our research is still a way. By today, we have not discovered the trace about a Pithecantropines (Homo erectus) and a Paleanthropic man (Homo sapiens neanderthalensis) at all in this region. We know that a Neanthropic man (Homo sapiens sapiens) dominated all the continents except Antarctica in the final time of the Pleistocene era. And they passed along the dried shoal which appeared to the north in the same time from the Asian Continent to the Island of Hokkaido, and reached it to this place. The first attainment time is an age which exceeds 20,000-years before a little from the present. We are not checking a fact which exceeds it you to be much. However, the habitants of these beginnings left the trace of the activity of them in large numbers, so that he was wonderful to inside of this island. The studies-of-prehistory research in Hokkaido has little proof of the natural science field concerned on age determination or chronology. This has serious restriction. However, the tephra-chronology of volcanic ashes has played the big role uniquely. The eruption of the Eniwa volcano of the Hokkaido central part is especially a very important index. This volcano blows off ash fall (En-a) in large quantities, and covered all large ranges. This deposited volcanic-ashes layer plays a big role to discernment of an old industry and a recent industry on the cultural chronology. The obsidian from this island and nearby hard shale was used for many industries of this Upper Paleolithic cultures as main materials. Although obsidians in the island where the different four outcrops are known well. This rock was mined in large quantities, and was carried in various places. As well as many examples in the world, we divided this rock, and the human beings of the prehistoric age were demanded for it, and it was often utilized. In it, especially the outcrop of Shirataki was located in the northern part of Hokkaido, and was very important. Large quantities of obsidian from Shirataki outcrop is discovered in a large number of Paleolithic sites within a segment 700 km in diameter at least. It covered the territory in Hokkaido and circulated further also except this island. This fact circulated as important trade materials on stone-tool fabrication among the human-beings groups from whom this island's every place differed. In this time, human beings’ activity in Hokkaido is a clear proof, which was not isolated at all. As for the studies of the prehistorians of Hokkaido distinguish, the exception put the technical process of eight different microblade productions. The technical process of some of them was limited only to the specific narrow area. Or it is proved that other technical processes are widely connected with the human-beings group of the Asian Continent on the contrary. At present, our research grasps the whole second-half Paleolithic culture, and has not yet established the year system edited by locally complete. The oldest industry of this area composed the typical stone tool of second-half Paleolithic culture from the beginning, and was accompanied by the manufacturing technique of a braid and microblade. The feature is the example in which the ruins of Kashiwadai-I were most excellent. These ruins correspond at time older than deposition of the Eniwa volcano tephra. It is located at the chill time in the second half of a Würm glacial period. The second continuing step is an industry of succession newer than this volcano tephra. It is raised as an example with Ôsatsu-16 typical ruins etc. The third phase is an industry of the end term of second-half Paleolithic culture. It is simultaneously located in the dawn of Jōmon culture. The feature of this cultural aspect is a transitional cultural stage which earthenware appears and is called what is called “Sub-Neolithic-Culture”. We can check having passed expansively, while the aspect of this last continues within a short period of time relatively.     

北京市植物物候对热岛效应的响应

都市的快速发展致使城市热岛效应日渐加剧。城市绿化对缓解热岛效应有一定的作用,但同时其物候也受到了影响。本文基于遥感影像数据,通过对照北京市热岛区与非热岛区、不同热岛强度等级的植物物候差别,研究热岛效应对植物物候的影响。采用Landsat 8影像对北京市地表温度进行反演,结合空间分析进行热岛效应分区分级识别;通过MOD13A1的归一化植被指数(NDVI)数据,采用Dallimer平均值法和动态阈值法提取植被生长季始期(SOG)、生长季末期(EOG)、生长季长度(LOG)等重要植被物候参数,研究植被物候在热岛区与非热岛区、不同热岛强度等级之间的差异。结果表明:北京市夏季与冬季相比,热岛效应更为显著;利用Dallimer平均值法提取的北京市热岛区SOG比非热岛区提前4 d,EOG延迟9 d,LOG延长13 d;利用动态阈值法提取的SOG提早10 d,EOG推迟4d,LOG延长14 d,动态阈值法提取的物候信息与观测的物候信息更为接近;随着热岛强度等级提高,SOG提前,EOG推迟,LOG延长。本研究丰富了我国华北地区植被物候对热岛效应的响应机制,同时对研究全球变暖对生态系统的影响具有一定价值。     

喀斯特山地城市内山体绿地对城市热岛的减温效应——以安顺市西秀区为例

山体绿地是喀斯特山地城市内典型的城市绿地景观类型,其对于改善城市生态环境、提升喀斯特山地城市生态服务功能具有重要作用。以黔中典型喀斯特山地城市安顺市为研究对象,运用2011年和2016年两期热红外遥感影像和城市景观结构空间数据,在反演分析城市热岛效应及其强度时空分布特征的基础上,运用冷热点分析剖析了山体绿地与城市热岛效应冷点分布区的关系,揭示山体绿地对城市热岛的减温效应。结果表明:基于Landsat热红外遥感数据反演地表温度结果显示,2011—2016年,安顺市西秀区平均反演地表温度升高约4℃;主城区一带热岛效应呈现加剧趋势,但总体热岛面积呈下降趋势,绿岛区多分布于水体和山体绿地中,且山体绿地对热岛效应减缓作用逐年增大;热/冷聚集面积呈现上升趋势,约40%~50%的冷聚集区由山体绿地贡献,热聚集区主要由建筑用地和其他用地构成;500 m格网尺度下,山体绿地面积与地表温度呈显著负相关,表现为山体绿地面积占格网比例每增加10%,地表温度将降低0.17~0.27℃。研究结果可为喀斯特山地城市山体绿地管理、城市绿地空间规划和城市热环境缓解提供科学依据。     

Identification of five small heat shock protein genes in Spodoptera frugiperda and expression analysis in response to different environmental stressors

Spodoptera frugiperda (J. E. Smith) is a highly adaptable polyphagous migratory pest in tropical and subtropical regions. Small heat shock proteins (sHsps) are molecular chaperones that play important roles in the adaptation to various environment stressors. The present study aimed to clarify the response mechanisms of S. frugiperda to various environmental stressors. We obtained five S. furcifera sHsp genes (SfsHsp21.3, SfsHsp20, SfsHsp20.1, SfsHsp19.3, and SfsHsp29) via cloning. The putative proteins encoded by these genes contained a typical α-crystallin domain. The expression patterns of these genes during different developmental stages, in various tissues of male and female adults, as well as in response to extreme temperatures and UV-A stress were studied via real-time quantitative polymerase chain reaction. The results showed that the expression levels of all five SfsHsp genes differed among the developmental stages as well as among the different tissues of male and female adults. The expression levels of most SfsHsp genes under extreme temperatures and UV-A-induced stress were significantly upregulated in both male and female adults. In contrast, those of SfsHsp20.1 and SfsHsp19.3 were significantly downregulated under cold stress in male adults. Therefore, the different SfsHsp genes of S. frugiperda play unique regulatory roles during development as well as in response to various environmental stressors.