Aquatic invertebrates in riverine landscapes

1. Riverine systems consist of a mosaic of patches and habitats linked by diverse processes and supporting highly complex communities. Invertebrates show a high taxonomic and functional diversity in riverine systems and are in several ways important components of these systems. Their distribution patterns, movements and effects on ecological flows, testify to their importance in various landscape ecological processes. This paper reviews the invertebrate literature with respect to patterns and processes in the riverine landscape. 2. The distribution of invertebrates in riverine habitats is governed by a number of factors that typically act at different scales. Hence, the local community structure can be seen as the result of a continuous sorting process through environmental filters ranging from regional or catchment‐wide processes, involving speciation, geological history and climate, to the small‐scale characteristics of individual patches, such as local predation risk, substratum porosity and current velocity. 3. Dispersal is an important process driving invertebrate distribution, linking different ecological systems across boundaries. Dispersal occurs within the aquatic habitat as well as into the terrestrial surrounding, and also over land to other waterbodies. New genetic techniques have contributed significantly to the understanding of aquatic invertebrate dispersal and revealed the importance of factors such as physical barriers, synchrony of emergence and taxonomic affiliation. 4. Invertebrates affect the cycling of nutrients and carbon by being a crucial intermediate link between primary producers, detritus pools or primary consumers, and predators higher up in the trophic hierarchy. Suspension feeders increase the retention of carbon. The subsidies of aquatic invertebrates to the terrestrial ecosystem have been shown to be important, as are reciprocal processes such as the supply of terrestrial invertebrates that fall into the water. 5. Future studies are needed both to advance theoretical aspects of landscape ecology pertaining to the invertebrates in riverine systems and to intensify the experimental testing of hypotheses, for example with respect to the scaling of processes and to linkages between the terrestrial and aquatic systems. Another promising avenue is to take advantage of naturally steep environmental gradients, and of systems disturbed by humans, such as regulated rivers. By comparison with unimpaired reference sites, the mechanisms involved might be identified. The use of `natural' experiments, especially where environmental gradients are steep, is another technique with great potential.     

Anthropogenic nitrogen sources and relationships to riverine nitrogen export in the northeastern U.S.A.

Human activities have greatly altered the nitrogen (N) cycle, accelerating the rate of N fixation in landscapes and delivery of N to water bodies. To examine relationships between anthropogenic N inputs and riverine N export, we constructed budgets describing N inputs and losses for 16 catchments, which encompass a range of climatic variability and are major drainages to the coast of the North Atlantic Ocean along a latitudinal profile from Maine to Virginia. Using data from the early 1990's, we quantified inputs of N to each catchment from atmospheric deposition, application of nitrogenous fertilizers, biological nitrogen fixation, and import of N in agricultural products (food and feed). We compared these inputs with N losses from the system in riverine export.The importance of the relative sources varies widely by catchment and is related to land use. Net atmospheric deposition was the largest N source (>60%) to the forested basins of northern New England (e.g. Penobscot and Kennebec); net import of N in food was the largest source of N to the more populated regions of southern New England (e.g. Charles & Blackstone); and agricultural inputs were the dominant N sources in the Mid-Atlantic region (e.g. Schuylkill & Potomac). Over the combined area of the catchments, net atmospheric deposition was the largest single source input (31%), followed by net imports of N in food and feed (25%), fixation in agricultural lands (24%), fertilizer use (15%), and fixation in forests (5%). The combined effect of fertilizer use, fixation in crop lands, and animal feed imports makes agriculture the largest overall source of N. Riverine export of N is well correlated with N inputs, but it accounts for only a fraction (25%) of the total N inputs. This work provides an understanding of the sources of N in landscapes, and highlights how human activities impact N cycling in the northeast region.     

Typologie des rivières oligotrophes du massif Ardennais (Belgique) par l'analyse multivariée de relevés de diatomées benthiques

Typology of oligotrophic streams of the Ardenne (Belgium) by multivariate analysis of benthic diatoms records.During three years, samples of water and algae has been taken in 72 stations distributed on the river system of the northern part of the Ardennes. 357 taxa of diatoms have been identified. Principal component analysis and cluster analysis, applied to diatoms counts, allowed to classify the records in a table comparable to phytosociological tables. A continuum in the data is an indication of the progressive modification of the communities according to the physico-chemical characteristics of the water. Ten diatoms assemblages have been described and this typology has been compared to some algal associations defined in the literature. In natural environments, these 10 assemblages are strictly correlated with the nature of the geological substrate and the physico-chemical characteristics of the water. The sensibility of the oligotrophic streams is revealed by the speedy changes in the communities after following a small modification of the environmental factors (seasonal variations or light eutrophication).

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Typologie des rivières oligotrophes du massif Ardennais (Belgique) par l'analyse multivariée de relevés de diatomées benthiques

     

Exome resequencing reveals signatures of demographic and adaptive processes across the genome and range of black cottonwood (Populus trichocarpa)

Extant variation in temperate and boreal plant species has been influenced by both demographic histories associated with Pleistocene glacial cycles and adaptation to local climate. We used sequence capture to investigate the role of these neutral and adaptive processes in shaping diversity in black cottonwood (Populus trichocarpa). Nucleotide diversity and Tajima's D were lowest at replacement sites and highest at intergenic sites, while LD showed the opposite pattern. With samples grouped into three populations arrayed latitudinally, effective population size was highest in the north, followed by south and centre, and LD was highest in the south followed by the north and centre, suggesting a possible northern glacial refuge. F_ST outlier analysis revealed that promoter, 5′‐UTR and intronic sites were enriched for outliers compared with coding regions, while no outliers were found among intergenic sites. Codon usage bias was evident, and genes with synonymous outliers had 30% higher average expression compared with genes containing replacement outliers. These results suggest divergent selection related to regulation of gene expression is important to local adaptation in P. trichocarpa. Finally, within‐population selective sweeps were much more pronounced in the central population than in putative northern and southern refugia, which may reflect the different demographic histories of the populations and concomitant effects on signatures of genetic hitchhiking from standing variation.     

Microrépartition des populations de truite commune (Salmo trutta L.) de juvenile de saumon atlantique (Salmo salar L.) et des autres espès préntes dans la partie haute du Scorff (Bretagne)

Resume Une étude de la microrártition de la population de truite commune (Salmo trutta L.) et du juvénile de Saumon atlantique (Salmo salar L.) associée aux autres espès préntes est effectuée en fin d'été dans la partie amont du Scorff (distance source-estuaire 65 km).La population de saumon est composée uniquement d'individus d'âge 0⁺ alors que les truites ont entre 0⁺ et 3⁺ ans avec une majorité pour la classe d'âge des 1⁺ an. La densité de saumon augmente avec la vitesse de courant (r = 0,99) et la taille de la granulométrie du substrat. Un habitat trés favorable à l'espèce se caractérise par une faible profondeur (> 23 cm), une vitesse de courant élevée (61 cm/ s) et un substrat caillouteux. 75,4% de la population est recensée en plein courant.L'effet rive, est particulièrement important pour la truite quelque soit son âge (80,1%). L'absence de la truite 0⁺ du faciés à courant élevé et sa localisation près des berges dans les zones courantes (41 cm/ s) peu profondes entraînent une ségrégation spatiale avec le saumon de même âge. La truite d'au moins un an est présente dans des milieux plus profonds (27 cm) à vitesse de courant nulle à moyenne (< 28 cm/ s). L'effet rive est renforcée par la présence de nombreux courants en berge.Parmi les espéces d'accompagnement, le chabot a la distribution la plus large. La loche et la lamproie de Planer sont les espéces les plus abondantes et ont des densités très élevées dans des secteurs caractéristiques.L'ensemble de ces résultats est discuté en liaison avec les premières observations concernant la distribution de ces espèces sur le cours principal du Scorff.

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We describe the microdistribution of populations of Brown Trout (Salmo trutta L.) and of juvenile atlantic Salmon (Salmo salar L.) in the upstream part of the Scorff river (Brittany) at the end of summer.The Salmon population was composed of one age classe (0⁺) only while Trout age varied from 0⁺ to 3⁺ years, with a majority in age class 1⁺. Salmon density increased with current velocity (r = 0.99) and the nature of the substratum. A very favorable habitat for this species was characterized by reduced depth (< 23 cm), a high current velocity (61 cm s ¹) and a stony substrate. The largest part of the population (74%) was localized in the centre of the running open water.A bank effect was particularly important for brown trout, irrespective of age (80.1%). The trout 0⁺ is absent from shallow rifles and its presence in the few deep running water areas (41 cm s^–1) along the banks involved a spatial segregation with salmon 0⁺. The trout of one year and older were localized in deeper habitats (27 cm) with zero to medium current velocity (< 28 cm s^–1). The bank effect was intensified by the presence of many overhangs along the bank.Among the secondary species, sculpin had the widest distribution, but Stone-loach and brook lamprey were the most abundant species and reached high densities in characteristic areas.