转谷氨酰胺酶的分子生物学与基因工程

来源于微生物特别是轮枝链霉菌的转谷氨酰胺酶是一种重要的酶制剂,在食品工业中有着广泛的应用前景。本综述了近年来对转谷氨酰胺酶的分子生物学研究成果,以及对其进行基因工程改造的最新进展,讨论了其进一步的研究发展方向。笔认为采用基因工程生产重组转谷氨酰胺酶是解决目前酶价高昂和来源困难问题的一个大有希望的办法。     

干扰素研究及应用进展

1957年,英国科学家Isaacs和Lindenmann利用鸡胚绒毛尿囊研究流感干扰现象时,发现一种能够干扰病毒繁殖的物质,称之为干扰素（IFN）,由于干扰素对许多疾病有很好的治疗作用,一直是医学领域研究的重要物质之一。现在干扰素已成功地用于肝炎、肿瘤治疗等方面。为了充分发挥干扰素的作用,人们稍用基因工程的方法来对干扰素的产量及功效进行改进,已达到更好的应用,因此基因工程干扰素越来越多地成了研究的重点。     

Comparison of two different stool antigen tests for the primary diagnosis of Helicobacter pylori infection in turkish patients with dyspepsia

AIM: To assess the reliability of two different enzyme immunoassays in detecting the Helicobacter pylori status in stool specimens of Turkish patients with dyspepsia. MATERIALS AND METHODS: One hundred and fifty-one patients [74 with nonulcer dyspepsia (NUD), 64 with duodenal ulcer (DU) and 13 with gastric cancer] who were admitted to the endoscopy unit of Istanbul University, Cerrahpasa Medical Faculty for upper gastrointestinal endoscopy because of dyspepsia were enrolled in the study. Helicobacter pylori infection was confirmed in all patients by histology, rapid urease test and culture. A patient was classified as being H. pylori-positive if the culture alone or both the histology and the rapid urease test were positive and as negative only if all of these tests remained negative. Stool samples were obtained from patients to assess the reliability of a monoclonal (FemtoLab H. pylori) and a polyclonal (Premier Platinum HpSA) stool antigen test and to compare the diagnostic accuracies of these two tests. A chi2 test was used for statistical comparisons. RESULTS: Using cut-off values of 0.19 for FemtoLab H. pylori and 0.16 for Premier Platinum HpSA, the sensitivity, specificity, positive predictive value, negative predictive value and diagnostic accuracy were 93%, 90%, 98%, 68% and 93% for the monoclonal test and 84%, 67%, 94%, 40% and 81% for the polyclonal test, respectively. The sensitivity, specificity, negative predictive value and diagnostic accuracy of the monoclonal test were significantly greater than those of the polyclonal test (chi2 = 3.98; p < .05 for sensitivity and chi2 = 15.67; p = .000 for specificity, chi2 = 15.78; p = .000 for negative predictive value and chi2 = 6.37; p = .012 for diagnostic accuracy). The bacterial load did not affect the sensitivity of either test. CONCLUSIONS: The monoclonal FemtoLab H pylori test, using a cut-off 0.19, is a very sensitive, specific and easy to perform diagnostic tool for the primary diagnosis of H. pylori infection in Turkish patients with dyspepsia.     

Modeling problems in conservation genetics using captive Drosophila populations: Consequences of equalizing founder representation

Equalizing founder representation is a recommended practice for maintaining captive populations. However, this procedure has not been subject to controlled experimental evaluation. The effects on inbreeding, genetic variation, and reproductive fitness of maintaining small captive populations by equalizing founder representation (EFR) versus randomly choosing parents (RC) were compared. Ten replicate lines were created with unequal founder representations, split into EFR and RC lines, and maintained for a further eight generations. Founder representations computed from pedigrees were closer to equality in the EFR lines than in the RC lines or the base population, most of the changes being evident after one generation. Significant benefits of EFR were found in lowered inbreeding (mean inbreeding coefficients of 0.35 and 0.41, respectively, for EFR and RC lines) and average heterozygosity (0.141 for EFR, 0.084 for RC, compared with 0.216 in the base population). However, EFR was not significantly better than RC in moving allele frequencies towards equalized founder representation. No significant difference was found in reproductive fitness between EFR and RC (relative fitnesses compared to the base population were 0.179 for EFR and 0.182 for RC). The use of equalization of founder representation for a few generations can be recommended in the genetic management of captive populations derived from a small number of founders that contribute unequally. © 1992 Wiley-Liss, Inc.     

利用EXCEL快速进行毒力测定中的致死中量计算和卡方检验

根据机率值分析法和最小二乘法的原理 ,在Windows 98 Me 2 0 0 0 XP系统中 ,利用EXCEL软件编制了 2个杀虫剂毒力测定中计算有关毒力回归方程、LD50 、相关系数、LD50 的 95 %置信限、标准误以及卡平方检验等计算程序模板。计算时只需要输入试验浓度 (或剂量 )、试虫数和试虫死亡数 ,即可快速、简便、准确计算毒力测定的结果 ,并进行卡平方值的计算和适合性判断。     

根据cpDNA trnL-F非编码区序列变异分析黑桫椤海南和广东种群的遗传结构与系统地理

以黑桫椤分布在海南和广东 9个种群为材料 ,通过 PCR产物直接测序和克隆后再测序的方法测定了叶绿体 DNA(cp DNA) trn L- F非编码区序列。序列长度介于 10 17bp至 10 2 1bp;碱基组成 A T含量较高 ,百分比值为 6 0 .4 3%～ 6 2 .2 6 %。根据序列的核苷酸变异共鉴定出 15个单倍型。黑桫椤具高水平单倍型多样性 (h=0 .880 )和较高水平核苷酸多样性 (Dij=0 .0 0 342 ) ,其悠长的进化历史可能增加了遗传变异在谱系内的积累。单倍型最小生成网图和邻接树、种群间分化度 (FST=0 .12 6 4 5 )和基因流 (N m=3.4 9)、AMOVA分析 (地区间遗传变异占 11.91% ,p>0 .0 5 )以及 DNA歧义度结果一致显示 ,黑桫椤分布在海南和广东的种群彼此间不存在遗传分化。黑桫椤单倍型的系统发育地理式样具“星状”特征 ,提示种群在历史上曾经发生过扩张 ,扩张后的种群还未能获得足够时间去建立更加复杂的结构     

Performance of aneuploid backcross hybrids between the crop Brassica napus and its wild relative B. rapa

• Crossings between the diploid wild Brassica rapa (AA , 2n = 20) and the tetraploid cultivar B. napus (AACC , 2n = 38) can readily be made. Backcrosses to the wild B. rapa (BC ₁) produce aneuploids with variable chromosome numbers between 20 and 29. How does survival and performance relate to DNA content of plants?
• Growth of the BC ₁ plants was measured in the lab. One plant in the F₁ self‐pollinated spontaneously and produced abundant F₂ seeds that were also examined. The number of C‐chromosomes was estimated from DNA values obtained with flow cytometry.
• Average DNA value of the BC ₁ was similar to that of the parents, which shows that C‐chromosomes do not reduce success of pollen or embryos. The average DNA value in the F₂ was 13% higher than in the F₁, suggesting that extra C‐chromosomes facilitated gamete success and/or embryo survival. Under both optimal and drought stress conditions growth and survival of BC ₁ hybrids was similar to that of B. rapa . No significant correlations existed between growth or survival and DNA value.
• Aneuploid plants were not inferior under the conditions of the growth room and may persist in nature. We discuss other factors, such as herbivory, that could prevent hybrid establishment in the field.

     

海南地区与环渤海湾美人鱼发光杆菌美人鱼亚种水产动物分离株的表型与遗传特征分析

美人鱼发光杆菌美人鱼亚种(Photobacterium damselae subsp.damselae,PDD)是一种广泛分布于海洋环境内的重要病原菌,可导致多种海洋生物患病死亡,近年来在我国不同养殖区域内均有发现和报道.[目的]通过生理代谢表型、毒力基因分布和分子遗传分析,系统比较我国海南地区和环渤海湾不同株系PDD...     

Construction and evaluation of a metal ion biosensor

Escherichia coli, genetically engineered with a mercury(II)-sensitive promoter and the lux genes from Vibrio fischeri, were used as microbial bioluminescent sensors for the detection of mercury. Evaluation of this genetic construction was carried out by determining the effects of various parameters on cell suspensions maintained at constant conditions in a small 100-mL vessel. The strongest light intensities and quickest induction times occurred with cells in the midexponential growth phase maintained at 28 degrees C, concentrated to 1 x 10(9) cells/mL, mixed at very fast speeds, and aerated at 2 vvm (volume of air per volume of culture per minute) during light measurement in the small vessel. The cells were sensitive to the mercuric ion in the range of 20 nM to 4 muM (4 to 800 ppb), and the total response time was on the order of 1 hour, depending on the above parameters. The cells exhibited great specificity for mercury. The cells had almost equal specificity for organic and inorganic forms of the mercuric ion and responded more weakly to the mercurous ion. A simple, inexpensive, durable miniature probe (3 mL) was constructed and operated using the optimum parameters found in the small vessel as a guide. The range of sensitivity to the mercuric ion detected in the probe was 10 nM to 4 muM when aeration was provided. (c) 1993 John Wiley & Sons, Inc.     

Aging and epigenetics: longitudinal changes in gene-specific DNA methylation

DNA methylation has been associated with age-related disease. Intra-individual changes in gene-specific DNA methylation over time in a community-based cohort has not been well described. We estimated the change in DNA methylation due to aging for nine genes in an elderly, community-dwelling cohort of men. Seven hundred and eighty four men from the Veterans Administration Normative Aging Study who were living in metropolitan Boston from 1999-2009 donated a blood sample for DNA methylation analysis at clinical examinations repeated at approximately 3-5 year intervals. We used mixed effects regression models. Aging was significantly associated with decreased methylation of GCR, iNOS and TLR2 and with increased methylation of IFNγ, F3, CRAT and OGG. Obstructive pulmonary disease at baseline modified the effect of aging on methylation of IFNγ (interaction p = 0.04). For participants who had obstructive pulmonary disease at their baseline visit, the rate of change of methylation of IFNγ was -0.05% 5-methyl-cytosine (5-mC) per year (95% CI: -0.22, 0.13), but was 0.14% 5-mC per year (95% CI: 0.05, 0.24) for those without this condition. Models with random slopes indicated significant heterogeneity in the effect of aging on methylation of GCR, iNOS and OGG. These findings suggest that DNA methylation may reflect differential biological aging.