鹰嘴豆种质资源对Ascochyta rabiei的抗性评价及遗传多态性分析

以25 个鹰嘴豆品系为试验材料,通过叶面喷雾的方式进行Ascochyta rabiei菌悬液室内外人工接种,评价不同鹰嘴豆种质资源的抗病性;同时利用RAPD方法进行基因型鉴定,采用NTSYSpc 2.10t软件对分子标记结果进行遗传相似性的统计分析并建立各品系间的亲缘关系聚类图,探讨不同鹰嘴豆品系对A.rabiei抗性与遗传多态性间的关系。通过室内和田间鹰嘴豆抗A.rabiei鉴定结果综合分析表明：在25个鹰嘴豆供试品系中,“系选 03”和“216”品系均表现出稳定抗性特性;北园春品系表现出稳定中抗特性。通过RAPD多态性引物对这25 个供试品系进行PCR扩增,共获得129 个扩增条带,其中多态性条带共有67 条,多态性比例达51.94%,遗传相似系数为0.3731-0.9254。结合抗病性和遗传多态性,经方差分析表明,本研究所采用的鹰嘴豆品系对A.rabiei的抗性强弱与其遗传相似性之间无显著相关性。     

新疆东天山地区宽刺蔷薇居群表型多样性分析

对新疆东天山地区6个宽刺蔷薇（Rosa platyacantha）居群进行叶片、花序、果实、种子等11个表型性状的遗传多样性分析,结果表明：宽刺蔷薇各表型性状无论在居群间还是在居群内均表现出显著或极显著差异,存在丰富的表型多样性。6个居群11个性状的平均表型分化系数为27.50%,表明居群内多样性较居群间多样性更为丰富。各表型性状平均变异系数为16.51%,离散程度相对较低。对表型性状进行的变异系数多重比较和主成分分析均显示,果实相关性状的变异是造成宽刺蔷薇表型变异的主要来源。性状相关性分析进一步发现,生殖生长与前期的营养生长并无明显相关关系。聚类分析结果表明,6个宽刺蔷薇居群的表型性状并没有严格依地理距离聚类,而是受到遗传因素与环境条件特别是海拔因子的共同影响。     

河北省花生地方品种基于EST-SSR的遗传多样性及性状-标记相关分析

利用215对EST-SSR引物对70份河北省花生地方品种的遗传多样性进行扫描,结果表明,58对引物在不同材料间具有多态性,多态性引物比率为26.98%。共扩增出168个位点,其中156个为多态性位点;不同EST-SSR的多态性信息指数PIC变幅为0.063-0.9825,平均为0.5244。聚类分析结果表明,在阈值为8.00时,可以将各地方品种明显分为两大类,第Ⅰ类群为普通型,第Ⅱ类群为珍珠豆型和多粒型,与植物学分类一致。单标记－性状相关分析表明,同一标记位点可与多个性状相关,获得与5个农艺性状显著相关的标记12对。     

Association between a rare novel TP53 variant (rs78378222) and melanoma,squamous cell carcinoma of head and neck and lung cancer susceptibility in non‐Hispanic Whites

Recently, several studies have investigated the association between a newly reported rare functional single nucleotide polymorphism (SNP) in TP53 (rs78378222) and cancer risk, but generated inconsistent findings. The present study further investigated this association with risk of melanoma, squamous cell carcinoma of head and neck (SCCHN) and lung cancer. Using volunteers of non‐Hispanic Whites recruited for three large case–control studies, we genotyped the TP53 rs78378222 SNP in 1329 patients with melanoma, 1096 with SCCHN, 1013 with lung cancer and 3000 cancer‐free controls. Overall, we did not observe any variant homozygotes in this study population, nor significant associations between the TP53 rs78378222AC genotype or C allele and risk for melanoma (P = 0.680 and 0.682 respectively) and lung cancer (P = 0.379 and 0.382 respectively), but a protection against SCCHN (P = 0.008 and 0.008 respectively), compared with the AA genotype or A allele. An additional meta‐analysis including 19,423 cancer patients and 54,050 controls did not support such a risk association either. Our studies did not provide statistical evidence of an association between this rare TP53 variant and increased risk of melanoma, nor of lung cancer, but a possible protection against SCCHN.     

Spatial and temporal variation in the macroinvertebrate community structure of the lower Elands River,Mpumalanga, South Africa

The Elands River, Mpumalanga, is an ecologically sensitive river that is constantly threatened by a variety of human activities. The influence of a pulp and paper mill on the river's macroinvertebrate assemblages was studied in March and June 2005, representing high- and low-flow seasons, respectively. Macroinvertebrates were collected from various biotopes using a standard sampling net, and were preserved and identified to family level. A range of multivariate and univariate statistical analyses was applied to assess the spatial and temporal variations in the macroinvertebrate communities. Diversity loss and dominance by a single taxon, Melanoides tuberculata, were noted directly below the mill. Other sites did not appear to be affected. Macroinvertebrate communities at all sites showed a strong seasonal variation.     

Genetically distinct Dutch-domesticated Clarias gariepinus used in aquaculture in southern Africa

Clarias gariepinus, a catfish species widely distributed in Africa including South Africa, is naturally absent from the Western Cape and the coastal Eastern Cape provinces. Because of its potential as an aquaculture species it has been widely used in aquaculture ventures in South Africa, specifically a stock known as Dutch catfish, a domesticated strain developed in the Netherlands. Mitochondrial DNA markers indicate that this stock is genetically distinct from the natural populations of C. gariepinus in South Africa. It could potentially pose a threat to South Africa's natural biodiversity if these fish were to escape from aquaculture farms, or was deliberately introduced into inland waters.     

锥栗自然居群遗传多样性的ISSR分析

采用20条ISSR分子标记对栗属中国特有种-锥栗(Castanea henryi)的16个自然居群进行了遗传多样性与遗传关系分析。在449份试材上共扩增得到379个位点,其中多态性位点378个,多态性位点百分率(PPL)达99.74%,平均期望杂合度(He)为0.2950,Shannon信息指数(I)为0.4522;居群水平遗传多样性为46.09%,且不同居群遗传多样性水平有较大差异,16个自然居群中以湘西居群的遗传多样性水平最高(PPL=53.30%,He=0.1861,I=0.2781),其次为靖州、庆元、昭通及都江堰居群,南平居群最低(PPL=36.94%,He=0.1202,I=0.1817)。Nei’s遗传多样性和AMOVA分析表明,居群间产生了较大的遗传分化(Gst=0.4466),锥栗自然居群内的遗传变异稍占优势(52.51%)。UPGMA聚类分析将16个锥栗居群分为2大类5亚类。湘西地区可能是锥栗的次生分布中心和现代遗传多样性分布中心,是锥栗研究的资源中心,也是最有价值的基因库,需要重点保护。     

中国新疆野苹果天然群体遗传多样性SSR分析

摘要：本研究以新疆巩留、新源、霍城、托里4个居群下的12个新疆野苹果群体为材料,应用涉及12个连锁群的17对SSR引物进行了群体微卫星位点等位基因和基因型差异分析,从地理居群、海拔高度、引物类型角度对新疆野苹果天然群体遗传多样性和遗传结构进行了 探索。结果表明：17对SSR引物在新疆野苹果中种内多态位点百分率达100%;XY1、HC2群体的基因多样性较高。聚类结果显示,同一居群下的群体分在相同的组中;巩留居群与新源居群的遗传关系最近,霍城居群次之,托里居群最远。不同地区间遗传多样性,霍城居群最高,托里居群最低。海拔高度对群体遗传结构影响较小,除了观测杂合度与海拔存在弱正相关外,大多数遗传参数与海拔无相关性。新疆野苹果群体内变异大于群体间,群体间分化很小,基因流较高。     

38份晾晒烟种质资源遗传关系的SSR分析

利用SSR标记技术对38份晾晒烟种质资源的遗传关系进行了分析。从自己开发的近3000对烟草SSR引物中随机选出30对引物,在38份供试材料中共检测出173个等位基因,每对SSR引物可检测的等位基因数为2~11个,平均为5.77个。38份材料间遗传相似系数（GS）的变化范围为0.165-0.928,平均GS 为0.546。表明38份晾晒烟的遗传多样性丰富,遗传差异较大,亲缘关系较远。聚类分析表明,在L1（GS-0.165）处可将38个品种分为2大类,即晾晒烟类群和美国从烟草起源地收集的烟草（TI：Tobacco Instruction）类群;晾晒烟类群又可进一步分为4组,其聚类结果与所期望的结果基本一致。表明SSR是一种有效、稳定和可靠的分子标记,能较好地从分子水平上揭示烟草(尤其是晾晒烟)种质资源的遗传背景和亲缘关系。     

基于线粒体基因片段核苷酸多态性的亚洲栽培稻起源进化研究

亚洲栽培稻的祖先是普通野生稻,已成为世界公认的观点,然而亚洲栽培稻的2个亚种:粳稻和籼稻是一次起源还是二次起源仍存在很大争议,其起源地是国内还是国外依然是国际学者间争论的焦点。本文通过对184份亚洲栽培稻和203份普通野生稻3段基因序列cox3、cox1、orf 224和2段基因间序列ssv-39/178、rps2-trnfM的多样性研究,验证了以下观点:1)粳稻起源于中国,籼稻起源于中国和国外;2)亚洲栽培稻的起源为二次起源,即普通野生稻存在偏籼和偏粳2种类型,亚洲栽培稻的2个亚种籼稻和粳稻在进化过程中分别由偏籼型的普通野生稻和偏粳型的普通野生稻进化而来。