A phylogeographical perspective on the ex situ conservation of Aylacostoma (Thiaridae,Gastropoda) from the High Paraná River (Argentina–Paraguay)

Aylacostoma Spix, 1827, contains species that are the subject of focused conservation efforts under the auspices of the ‘Aylacostoma Project’, the only ex situ conservation programme for freshwater gastropods in South America. Two species from the High Paraná River (Argentina–Paraguay) are included in this programme (Aylacostoma chloroticum Hylton Scott, 1954 and Aylacostoma brunneum Vogler & Peso, 2014), as their habitats have disappeared as a consequence of the filling of the Yacyretá Reservoir in the 1990s. At present, A. chloroticum is restricted to only one known wild population in a small and fragile habitat, and wild populations of A. brunneum are presumed to have gone extinct. We used partial sequences of the cytochrome oxidase subunit I gene to provide the first phylogeographical perspective on these species from a limited dataset containing representatives of several wild populations that are successfully being bred in captivity. We found low genetic diversity and two haplotypes in A. chloroticum, and absence of variation with one haplotype in A. brunneum. The reservoir's entry zone was identified to be of great interest for conservation, and is where we suggest re‐introductions and translocations should be targeted, to preserve the future evolutionary potential of the extant diversity. © 2015 The Linnean Society of London     

Description of a new species of Potamonautes MacLeay, 1838, from the iSimangaliso Wetland Park,South Africa

A new species of freshwater crab, Potamonautes isimangaliso sp. n., is described from the western shores of False Bay, Hluhluwe, within the iSimangaliso Wetland Park, South Africa. While bearing a superficial resemblance to Potamonautes lividus, the new species has been found to be genetically distinct, diverging from the former by 7.4–7.8% in mtDNA. Potamonautes isimangaliso most closely resembles Potamonautes lividus, but is distinguished by a unique suite of carapace characters, colouration, and size. The new species also lives in close association with oxygen-poor, fresh ephemeral pans, while the habitat of Potamonautes lividus is well above the surface water line of the closest water body. An updated identification key for the Potamonautes species of South Africa is provided.     

A new species of Hyalella (Crustacea,Amphipoda, Dogielinotidae) from the Atlantic Forest of Misiones,Argentina

The freshwater genus Hyalella Smith, 1874 has a distribution restricted to the Western Hemisphere with most species being found in South America. In this report we describe a new species of Hyalella from the Atlantic Forest of the Misiones province, Argentina.     

Atlas of Iberian water beetles (ESACIB database)

The ESACIB (‘EScarabajos ACuáticos IBéricos’) database is provided, including all available distributional data of Iberian and Balearic water beetles from the literature up to 2013, as well as from museum and private collections, PhD theses, and other unpublished sources. The database contains 62,015 records with associated geographic data (10×10 km UTM squares) for 488 species and subspecies of water beetles, 120 of them endemic to the Iberian Peninsula and eight to the Balearic Islands. This database was used for the elaboration of the “Atlas de los Coleópteros Acuáticos de España Peninsular”. In this dataset data of 15 additional species has been added: 11 that occur in the Balearic Islands or mainland Portugal but not in peninsular Spain and an other four with mainly terrestrial habits within the genus Helophorus (for taxonomic coherence). The complete dataset is provided in Darwin Core Archive format.     

Description of a new genus and three new species of Otothyrinae (Siluriformes,Loricariidae)

The genus Hisonotus was resurrected as a member of the tribe Otothyrini (actually subfamily Otothyrinae). However, phylogenetic studies based on morphological and molecular data showed that Hisonotus is not monophyletic and independent lineages can be identified, such as the group composed of the species Hisonotus insperatus, Hisonotus luteofrenatus, Hisonotus oliveirai, Hisonotus paresi and Hisonotus piracanjuba, a lineage unrelated to that containing the type species of the genus Hisonotus (Hisonotus notatus). Herein, based in molecular and morphological data, a new genus is described to accommodate the lineage mentioned above, into which are also added three new species. This new genus can be distinguished from other genera of Otothyrinae by the following combination of characters: (1) a pair of rostral plates at the tip of the snout; (2) two large pre-nasal plates just posterior to the rostral plates; (3) a supra-opercular plate that receives the laterosensory canal from the compound pterotic before the preopercle; (4) a well developed membrane at anal opening in females; and (5) a V-shaped spinelet. A key to species of Curculionichthys is provided.     

Phylogenetic ecology of widespread uncultured clades of the Kingdom Euryarchaeota

Despite its widespread distribution and high levels of phylogenetic diversity, microbes are poorly understood creatures. We applied a phylogenetic ecology approach in the Kingdom Euryarchaeota (Archaea) to gain insight into the environmental distribution and evolutionary history of one of the most ubiquitous and largely unknown microbial groups. We compiled 16S rRNA gene sequences from our own sequence libraries and public genetic databases for two of the most widespread mesophilic Euryarchaeota clades, Lake Dagow Sediment (LDS) and Rice Cluster-V (RC-V). The inferred population history indicated that both groups have undergone specific nonrandom evolution within environments, with several noteworthy habitat transition events. Remarkably, the LDS and RC-V groups had enormous levels of genetic diversity when compared with other microbial groups, and proliferation of sequences within each single clade was accompanied by significant ecological differentiation. Additionally, the freshwater Euryarchaeota counterparts unexpectedly showed high phylogenetic diversity, possibly promoted by their environmental adaptability and the heterogeneous nature of freshwater ecosystems. The temporal phylogenetic diversification pattern of these freshwater Euryarchaeota was concentrated both in early times and recently, similarly to other much less diverse but deeply sampled archaeal groups, further stressing that their genetic diversity is a function of environment plasticity. For the vast majority of living beings on Earth (i.e. the uncultured microorganisms), how they differ in the genetic or physiological traits used to exploit the environmental resources is largely unknown. Inferring population history from 16S rRNA gene-based molecular phylogenies under an ecological perspective may shed light on the intriguing relationships between lineage, environment, evolution and diversity in the microbial world.     

Marine-freshwater colonizations of haptophytes inferred from phylogeny of environmental 18S rDNA sequences

The Haptophyta is a common algal group in many marine environments, but only a few species have been observed in freshwaters, with DNA sequences available from just a single species, Crysochromulina parva Lackey, 1939. Here we investigate the haptophyte diversity in a high mountain lake, Lake Finsevatn, Norway, targeting the variable V4 region of the 18S rDNA gene with PCR and 454 pyrosequencing. In addition, the freshwater diversity of Pavlovophyceae was investigated by lineage-specific PCR-primers and clone library sequencing from another Norwegian lake, Lake Svaersvann. We present new freshwater phylotypes belonging to the classes Prymnesiophyceae and Pavlovophyceae, as well as a distinct group here named HAP-1. This is the first molecular evidence of a freshwater species belonging to the class Pavlovophyceae. The HAP-1 and another recently detected marine group (i.e. HAP-2) are separated from both Pavlovophyceae and Prymnesiophyceae and may constitute new higher order taxonomic lineages. As all obtained freshwater sequences of haptophytes are distantly related to the freshwater species C. parva, the phylogeny demonstrates that haptophytes colonized freshwater on multiple independent occasions. One of these colonizations, which gave rise to HAP-1, took place very early in the history of haptophytes, before the radiation of the Prymnesiophyceae.     

Counting Australia’s protected rivers

Summary Australia is committed to protecting its important and representative ecosystems. Foremost among protection measures is the network of terrestrial and marine protected areas that comprise the National Reserve System (NRS). However, these reserves were often established with little regard for the conservation needs of riverine ecosystems. There has been no conservation status assessment to determine whether riverine ecosystems are adequately protected within terrestrial reserves. This study begins this task by determining the extent of riverine protection through the NRS. Three classes of protection are defined based on the proportion of the catchment of each stream segment (the link between tributary confluences) that is contained within a protected area, and the presence of major in‐stream barriers. The analysis reveals cause for concern. While nearly 225 000 km (7.6%) of the 2.9 million kilometres of streams assessed fall within a protected area of IUCN class I to IV where the principal objective is nature conservation, just 12 334 km of stream, less than half of one per cent of the total stream length, receives Class A protection, the strongest level of protection against threat. Class A is achieved where an entire drainage basin is contained within a protected area. Most of the protected stream length of the larger, named streams is potentially threatened by land‐use activities occurring in unprotected headwaters or is fragmented by major dams and thus receives the lowest class of protection. Owing to a variety of pervasive threats, a more comprehensive conservation status assessment of these ecosystems would undoubtedly yield an even more pessimistic result. Such an assessment is recommended.     

Historical biogeography and distribution of the freshwater calanoid copepods (Crustacea: Copepoda) of the Yucatan Peninsula, Mexico

Aim To determine and analyse the distribution of the freshwater calanoid copepod (Diaptomidae and Pseudodiaptomidae) fauna of the Yucatan Peninsula (YP) and its relation to the geological history of this Neotropical karstic plain. Location The Yucatan Peninsula, Mexico. Methods Plotting of geo‐referenced sites, analysis of local and regional geological history, analysis and comparison of regional and local records. Results The current composition and distribution of Diaptomidae and Pseudodiaptomidae in the YP mainly reflects recent, post‐Pliocene colonization events. This invasion did not reach America, but only parts of Central America (CA). The presence of diaptomids in the continent since the pre‐Cretaceous and the presumed post‐Cretaceous (Palaeocene–Oligocene) radiation of Diaptomidae in Middle America suggest earlier colonizations of the YP. The marine transgressions kept most of the YP submerged in different geological periods, thus eliminating any original primary freshwater colonizers, such as the diaptomids. The periods of marine regression probably represented opportunities for new waves of diaptomid colonization of the YP. The latest dispersal of diaptomids in the YP during the Holocene (8000 yr bp ) was probably an intermittent process because of the alternative dry and wet periods and interglacial transgressions. The presence of the Nearctic Leptodiaptomus and Arctodiaptomus in the YP and the current distribution of Mastigodiaptomus might represent remnants of earlier invasions of Diaptomidae in Middle America. The Neotropical Mastigodiaptomus probably originated in the Late Cretacic CA/proto‐Antilles complex. Forms derived from a M. albuquerquensis type ancestor radiated into the YP leaving relatively isolated populations of three species in the northern half of the peninsula. The distribution of the brackish water Pseudodiaptomus marshi well inside the coastline might have resulted from stranding and subsequent adaptation of this species during a marine regression in the Bacalar formation; this agrees with the vision of this taxon as being in process of invasion of freshwater environments. Main conclusions It is not probable that the South American (SA) diaptomid fauna originated from an invasion of upper Neotropical/Nearctic forms. The current distribution of freshwater calanoid copepods reflects relatively recent, post‐Pliocene biogeographical patterns, but probably older patterns are involved as well. The northern and eastern coasts of the Yucatan are the most recently colonized by diaptomids. Differing from other freshwater groups surveyed in the Yucatan that have marine relatives (i.e. fishes, amphipods, isopods, mysids, macrocrustaceans), there is no evidence of local vicariant events involving cave‐dwelling forms or marine relicts in the diaptomid fauna of the YP.     

Parsimony Analysis of Endemicity (PAE) of Mexican hydrological basins based on helminth parasites of freshwater fishes

Aim The distributional patterns of helminthological fauna of freshwater fishes were analysed to postulate a general hypothesis on the relationships of some Mexican hydrological systems. Location Eight hydrological systems of central and eastern Mexico were studied and compared with records from Nicaragua. Methods A Parsimony Analysis of Endemicity (PAE) was applied to the presence/absence of ninety‐two helminth parasite taxa (Monogeneans, Digeneans, Cestodes, Acanthocephalans and Nematodes) of freshwater fishes, from eight Mexican hydrological systems, using the Hennig86 program. Results The results represent the first attempt for a biogeographical analysis through application of the PAE method to the distributional patterns of helminth parasites of freshwater fishes in Mexico. A single most parsimonious cladogram was obtained, which grouped all the Neotropical systems in accordance with previous proposals based on other plant and animal taxa. Main conclusions The most basal systems were Santiago and Lerma basins, which exhibited Nearctic affinities. The remaining areas of the cladogram showed Neotropical affinities. All the southeastern systems were grouped in a clade with the Nicaragua system, providing support for a ‘Mesoamerican province’ based on helminth parasites of cichlids. The cladogram also suggests that the treatment of the Lerma‐Santiago basin as a single biogeographical unit is inaccurate and that they should be treated as separate systems.