Large-scale assessments of river health using an Index of Biotic Integrity with low-diversity fish communities

1. Effective tools are needed to measure the ‘health’ of rivers at scales large enough to be useful for management. Indicators for assessing the complex of variables that constitutes river health need to be ecologically based, efficient, rapid and consistently applicable in different ecological regions. 2. A large-scale survey of rivers in New South Wales, Australia provided data to test the Index of Biotic Integrity (IBI). The IBI employs the fish-community attributes, identified using regional and river-size data, expected for a river reach of excellent environmental quality. It uses metrics based on species richness, abundance, community structure and the health of individual fish. IBI metrics were established to suit a relatively low-diversity and unspecialized freshwater fish fauna in south-eastern Australia, totalling 55 species. 3. The IBI was able to discriminate between relative levels of environmental quality within a diverse set of stream systems and four presumptive ecological regions. The index was validated by testing the repeatability of scores, and by comparison of IBI scores at eighty sites with an independent measure of potential catchment condition, the River Disturbance Index. 4. Assessments of metric performance showed that eleven of the twelve metrics contributed satisfactorily. One metric based on trophic guild performed poorly and should be deleted from the index. Six other recommendations are made to enhance the performance of the IBI. 5. Results show that, while all large rivers have been disturbed, rivers in the Murray region and those in many coastal montane areas are particularly degraded. 6. The IBI results presented here demonstrate a validated method for large-scale monitoring of river health based on a fish fauna of limited diversity, in the absence of suitable reference sites.     

Predicting community characteristics from habitat conditions: fluvial fish and hydraulics

1. One current approach to the prediction of community characteristics is to use models of key local-scale processes (e.g. niche dimensions) affecting individuals and to estimate the effects of these attributes over larger scales. We tested this approach, focusing on how the hydraulic habitat structures fluvial fish communities. 2. We used a recent statistical habitat model to predict fish community characteristics in eleven reaches in the Rhône river basin in France. Predictions were made ‘blindly’ since most reaches were not used to calibrate the model. The model reflects species preferences for local hydraulics. We made predictions of the fish community from the local hydraulic conditions found in the reaches under low flow conditions. The overall abundance and the relative abundance (both as indices) of fish species, specific size classes and species traits (i.e. reproductive, trophic, morphological and others) were predicted. We summarized our predictions of the relative abundance of species as two ‘community structure indices’ using Principal Component Analysis. 3. Our predictions from low-flow hydraulics were compared with long-term observations of fish communities. The relative abundance of species actually observed depended largely on zoogeographic factors within the Rhône basin which could not be predicted by the model. The model predicted 13% of the variance in the indices of relative abundance at the species level and 23% of this variance at the trait level for all zoogeographic regions combined. However, when focused on reaches within a geographic region, the model explained up to 47% of the same variance. Therefore, geographic regions act as ‘filters’ on the relative abundance of species, but hydraulics do affect fish communities within a given geographical context. 4. For the synthetic ‘community structure indices’, we obtained good predictions from hydraulics independently of the geographical context (variance explained up to 95%). These indices were linked to simple key hydraulic characteristics of river reaches (Froude and/or Reynolds number). The indices enabled interpretations of the links between hydraulics, geomorphology, discharge and community patterns. These links were consistent with existing knowledge of species and their traits. 5. In addition to the above validations, the habitat model partly explained the observed effects of impoundment on fish communities. 6. The present results show that stream hydraulics strongly impact fish community structure. Consequently, our findings confirm that community characteristics can be predicted using models of the local-scale habitat requirements of the species forming the community.     

Fixing Content and Function in Neurobiological Systems: The Neuroethology of Electroreception

Are attributions of content and function determinate, or is there no fact of the matter to be fixed? Daniel Dennett has argued in favor of indeterminacy and concludes that, in practice, content and function cannot be fixed. The discovery of an electrical modality in vertebrates offers one concrete instance where attributions of function and content are supported by a strong scientific consensus. A century ago, electroreception was unimagined, whereas today it is widely believed that many species of bony fish, amphibians, sharks, skates, and rays possess this non-human sensory modality. A look at the history of science related to this discovery reveals a highly interdisciplinary endeavor, encompassing ethology, behavioral analysis, neuroscience, and evolutionary biology. While each area provides important evidence, none is sufficient on its own to fix content and function. Instead, I argue that an interdisciplinary, neuroethological approach is required to carry out such determinations. Further, a detailed consideration of biological research suggests that while content and function claims are empirically underdetermined and uncertain, there is insufficient reason to believe in an additional problem of indeterminism. In particular, Dennett's indeterminism arises from a research methodology -- logical adaptationism -- that generates evidence from only one of the areas of neuroethology. However, logical adaptationism does not reflect adaptationism as it is practiced in contemporary biology. I conclude that Dennett is faced with a dilemma: On the one hand, he can hold to logical adaptationism and the indeterminism that results from it, while giving up the relevance of his arguments to biological practice. On the other, he can embrace a more accurate version of adaptationism -- one which plays a role in a larger neuroethological framework -- but from which no strong indeterminacy claims follow.     

Thermal sensitivity of mitochondrial function in the Antarctic Notothenioid Lepidonotothen nudifrons

The thermal sensitivity of mitochondrial function was investigated in the stenothermal Antarctic fish Lepidonotothen nudifrons. State 3 respiration increases with increasing temperature between 0 °C and 18 °C with a Q ₁₀ of 2.43–2.63. State 4 respiration in the presence of oligomycin, an inhibitor of mitochondrial ATP synthase, quantifies the leakage of protons through the inner mitochondrial membrane, which causes oxygen consumption without concomitant ATP production. This parameter shows an unusually high Q ₁₀ of 4.21 ± 0.42 (0–18 °C), which indicates that proton leakage does not depend merely on ion diffusion but is an enzyme-catalysed process. The differential thermal sensitivity of oxidative phosphorylation (=state 3) and proton leakage (=state 4 in the presence of oligomycin) leads to progressive uncoupling of the mitochondria and decreased efficiency of oxidative phosphorylation under in vivo conditions if the body temperature of L. nudifrons increases. Accepted: 2 September 1999     

Tributyltin in U.S. Market-Bought Seafood and Assessment of Human Health Risks

This study assessed potential human health risks posed by tributyltin in seafood purchased from U.S. seafood markets. In 1989 and 1990, samples of fish, bivalve molluscs and crustacea were purchased at local markets along the Atlantic, Gulf and Pacific coasts of the United States and along the Great Lakes (Lake Michigan). Samples were then analyzed for tributyltin, and the concentrations observed used to evaluate potential human health risks from consumption of market-bought seafood on the basis of available mammalian toxicology data. The assessment indicated health effects were unlikely from exposure to tributyltin in market-bought seafood during 1989 to 1990, shortly after peak tributyltin usage in antifoulant bottom paints on vessels in the United States.     

Safety Evaluation of Transgenic Tilapia with Accelerated Growth

Recent advances in modern marine biotechnology have permitted the generation of new strains of economically important fish species through the transfer of growth hormone genes. These transgenic fish strains show improved growth performance and therefore constitute a better alternative for aquaculture programs. Recently, we have obtained a transgenic tilapia line with accelerated growth. However, before introducing this line into Cuban aquaculture, environmental and food safety assessment was required by national authorities. Experiments were performed to evaluate the behavior of transgenic tilapia in comparison to wild tilapia as a way to assess the environmental impact of introducing transgenic tilapia into Cuban aquaculture. Studies were also conducted to evaluate, according to the principle of substantial equivalence, the safety of consuming transgenic tilapia as food. Behavior studies showed that transgenic tilapia had a lower feeding motivation and dominance status than controls. Food safety assessment indicated that tilapia growth hormone has no biological activity when administered to nonhuman primates. Furthermore, no effects were detected in human healthy volunteers after the consumption of transgenic tilapia. These results showed, at least under the conditions found in Cuba, no environmental implications for the introduction of this transgenic tilapia line and the safety in the consumption of tiGH-transgenic tilapia as an alternative feeding source for humans. These results support the culture and consumption of these transgenic tilapia. Received: March 9, 1998; accepted June 25, 1998.     

Fish Growth in Marine Culture Systems: A Challenge for Biotechnology

Aquaculture production is constrained largely by the growth efficiency of the species being produced. Nutritional approaches have played an important part in improving this situation, but, it is argued, the room for further improvement using such established techniques is limited. Alternative ways of improving fish production by utilizing recent biotechnological advances are explored and assessed as to their potential for commercialization in the near future. Transgenic technologies promise a revolution in aquaculture, but it is considered that consumer resistance may delay the use of transgenic fish for food production. An alternative approach could be the breeding of transgenic fodder plants without the amino acid deficiencies of existing alternatives to fish meal in aquaculture diets. The use of probiotics could reduce antibiotic use on fish farms while they might also provide the basis for ``smart' diets, tailored to specific purposes by the inclusion of microorganisms. The selection and genetic engineering of nitrifying and denitrifying bacteria could also pave the way for fully enclosed, recirculating marine culture systems, which would allow control of the environmental variables that currently restrain marine fish culture. Received August 10, 1998; accepted October 8, 1998.     

不同基因组组合的鱼类抗原基因剂量效应的研究(英文)

本文采用经典免疫遗传学方法研究了鲤鱼不同基因组组合的基因剂量与抗原表达的关系。分别从红鲤（RC）、红鲫（RA）、镜鲤（MC）和鲤鲫二倍体杂种（CA）采血样,制备红细胞悬液。常规方法免疫兔子,使效价高于64,制备抗RC、RA、MC、CA血清。Tab．1为2N、3N、4N鲤鱼来源的红细胞与四种抗血清的凝集实验结果,表明：亲缘关系越近,滴度越高;不过,不同倍性鲤鱼之间,差异不显著。Tab．2为2N、3N、4N鲤鱼来源的红细胞与四种抗血清吸附反应后,与各自靶细胞RC、RA、MC、CA的吸收实验结果,表明：抗血清被吸附后的残留活性与受试者的亲缘关系呈反比,即：亲缘关系越近,残留活性越低。以CA／antiCA组为例,CCA为16,MC为32,表明：两者均含有镜鲤基因组,而后者多一套镜鲤基因组,吸收效价亦有随之增高的趋势。基于Tab．2可以推演出鲤鱼不同基因组组合的系（种）血清学检索表（Tab．3）。