Tree Ferns in the Interior and at the Edge of a Mexican Cloud Forest Remnant: Spore Germination and Sporophyte Survival and Establishment1

The three most common tree fern species in a Mexican montane cloud forest fragment (Alsophila firma, Lophosoria quadripinnata and Sphaeropteris horrida) were selected for laboratory and transplant experiments. The objectives were: (1) to determine the percentage of spore germination and gametophytes producing sporophytes, and (2) to compare early establishment of sporophytes at the edge and in the interior of the forest. Percent spore germination varied between 16 and 86 percent, and the number of gametophytes that produced sporophytes was high (>50%). Survival and growth of sporophytes differed between species and habitats. Survival was greater at the edge than in the forest interior for Lophosoria, but it was similar for Alsophila and Sphaeropteris. Number and length of fronds were higher at the forest edge for individuals of Alsophila and Lophosoria, but not for Sphaeropteris. RGR was higher at the forest edge than in the forest interior for sporophytes of the three species. This study suggests that the forest edge is an appropriate habitat for establishment of Alsophila and Lophosoria, but Sphaeropteris is apparently a forest interior species.     

Assessment of gene copy number in the homosporous fernsCeratopteris thalictroides andC. richardii (Parkeriaceae) by restriction fragment length polymorphisms

Homosporous ferns are generally considered polyploid due to high chromosome numbers, but genetically diploid since the expression of isozymes is generally controlled by a single locus. Gene silencing over evolutionary time is one means by which this apparent contradiction can be explained. A prediction of this hypothesis is that silenced gene sequences still reside in the genomes of homosporous ferns. We examined the genomes ofCeratopteris richardii andC. thalictroides for sequences which are similar to expressed gene sequences. Genomic DNA blots hybridized withC. richardii cDNA clones showed that the majority of these clones detected multiple fragments, suggesting that most gene-like sequences are duplicated inCeratopteris. Hybridization signal intensity often varied between fragments of the same size between accessions, sometimes dramatically, which indicates that not all sequences are equivalent, and may represent the products of silenced genes. Observed reciprocal differences in intensity could be due to reciprocally silenced genes. In addition, an unusual segregation pattern for one locus followed by one probe may indicate homeologous chromosome pairing and segregation.     

A human-induced downward-skewed elevational abundance distribution of pteridophytes in the Bolivian Andes

Aim  To search for differences in the spatial variability of upper and lower elevational distribution limits of tropical ferns, based on the assumption that these are determined to different degrees by biotic and abiotic factors.
Location  The Yungas biogeographical region, in the Bolivian Andes.
Methods  From a data base of > 25,000 herbarium records, we analysed the skewness of the elevational distribution of 220 montane pteridophyte species, each with  15 records. Additionally, we compared the spatial variability of upper and lower elevational range limits of ferns in 351 plots of 400 m² each along four elevational transects separated by 15–450 km.
Results  Individual species showed variable elevational distribution patterns, ranging from symmetric to asymmetric, i.e. downward and upward skewed, but overall there was a statistically significant trend towards asymmetric distributions with abrupt upper limits and diffuse lower limits. This trend, however, was almost exclusively due to terrestrial species occurring at and above the current timberline. The analysis of the elevational transects revealed no significant trends.
Main conclusions  The downward-skewed distributional abundance of terrestrial, open-country ferns near the timberline appears to be a result of the extensive forest destruction that has lowered the timberline in the high Andes by 500–800 m, opening up habitats for a restricted suite of species. Our study shows that a limited number of species can cause a general trend in the overall data set, and that failure to extract these data may result in unsupported conclusions, in our case to assign a greater importance to biotic and abiotic factors in the elevational limitation of plants at lower and upper elevations, respectively.     

The Relationship between Aleuritopteris humatifolia and A-chrysophylla Based on Three Chloroplast DNA Sequences Analyses

Total DNA from 27 species including Aleuritopteris humatifolia and Achrysophylla and related taxa was extracted in this research, and the rbcL, trnL F and matK sequences were amplified and sequenced. The sequences were aligned by ClustalX. The phylogenetic trees were constructed by Maximum parsimony methods and the intraspecific and interspecific genetic distance were computed in MEGA 60. The results showed as follows: no significant difference among rbcL, trnL F and matK sequences of one sample of Ahumatifolia and two samples of Achrysophy lla, and the maximum genetic distance between Ahumatifolia and Achrysophylla were less than the minimum genetic distance between Ahumatifolia and other closely related species. Therefore, our study support the taxonomic treatment of reducing Ahumatifolia to synonym of Achrysophylla based on our phylogenetic analysis combining the evidences from their morphological characters of blades, spores, indusia, and rhizome scales.     

Exploring the pteridophyte flora of the Eastern Afromontane biodiversity hotspot

In this review, we explore our current understanding of the fern and lycophyte diversity occurring in the Eastern Afromontane Biodiversity Hotspot (EABH). The review explores the species diversity of this region in the context of the Afromadagascan pteridophyte diversity based on an exhaustive species list assembled in the synopsis of Afromadagascan pteridophytes published by Roux in 2009. The list was updated by incorporating recent progress in our understanding of the taxonomy and phylogeny of these plants. Evidence for a distinct pteridophyte flora occurring in the East African mountain region was discovered using ordination and clustering analyses. This EABH floras shares links to other Afromadagascan pteridophyte floras such as the one in the tropical lowland forests of central and western Africa. These floras share the dominance of species that preferably occur in humid climates whereas other African pteridophyte floras tend to contain a higher proportion of xeric adapted ferns. The phylogenetic composition of the EABH pteridophyte flora was assessed by comparing global versus local proportion of orders, families, and genera. This analysis revealed distinct patterns that are partly caused by the radiation of Blotiella and Triplophyllum besides selective colonization of species pre-adapted to Afromadagascan climates. In situ speciation in the East African tropical mountains may have contributed to the global diversity of widespread genera such as Asplenium and Pteris. In summary, this is the first comprehensive attempt to assess the pteridophyte diversity of the East African mountains providing the framework for future studies on their conservation, ecology, and evolution.     

东亚特有珍稀蕨类植物岩穴蕨(碗蕨科)高通量转录组测序及分析

岩穴蕨(Monachosorum maximowiczii)隶属于碗蕨科稀子蕨属, 是东亚中高海拔地区所特有的珍稀濒危植物。为了在分子水平对该物种有进一步的认识, 本文首次利用二代高通量测序技术(RNA-seq)对岩穴蕨进行了转录组测序分析。通过Illumina Hiseq 2500测序平台, 共计获得4.95 Gb原始数据(raw data), 经过滤后得到4.83 Gb有效数据(clean reads), 并进行从头组装得到了101,448条unigene。其中, 54,106条unigene预测到完整的开放阅读框。我们利用目前已知的51个植物基因组数据, 对岩穴蕨的unigene进行了详尽的功能注释, 并通过GO、COG、KEGG注释进一步了解了这些编码基因的作用方式、特征以及所参与的代谢通路。同时, 转录因子分析结果也为岩穴蕨的环境适应机制研究提供了初步线索。     

Pteridophyte species richness in Andean forests in Bolivia

I assessed the magnitude and distribution of pteridophyte species richness on the eastern Andean slope in Bolivia based on 676 study plots of 400 m² each in forest habitats at 65 study sites. In total 755 species were recorded, including 426 (56%) epiphytes and 598 (79%) terrestrials, with 266 species (35%) recorded under both groups. Mean number of species per plot at a given site varied from 0 to 31.1 for epiphytes, 0 to 20.9 for terrestrials, and 0 to 47.9 for all species combined. The highest numbers of species recorded at a given study site were 110 epiphytes, 101 terrestrials, and 167 species in total. While overall there were more terrestrial than epiphytic species, at individual sites and plots the reverse was true, indicating that terrestrial species tended to be more patchily distributed than epiphytes. Despite high survey intensity, many species went unrecorded; the minimum estimate of total species richness obtained through extrapolation was 975 species overall, including 559 epiphytes and 880 terrestrials. A correlation analysis of species richness to 14 environmental parameters revealed a highly positive correlation to mean annual precipitation and bryophyte cover on tree branches (a proxy for air humidity). Significant correlations to other parameters (e.g. human impact, canopy height, etc.) reflected the covariance of these factors with precipitation and bryophyte cover. Despite a lack of data on the pteridophyte communities from much of the Bolivian Andes, it appears that in most of the countries, pteridophyte diversity can be protected by focussing the most humid parts of the Andean forests.     

蕨类植物组织培养研究进展(综述)

蕨类植物组织培养可分为以孢子为外植体的无菌播种和以孢子体为外植体进行的组织培养.本文简要介绍国内外蕨类植物组织培养研究概况,综述培养基成份、培养方式及培养条件对组织培养过程中生长发育的影响,同时介绍蕨类植物组织培养中世代转换的诱导及调控.     

The occurrence and morphology of Adiantum X variopinnatum (Pteridaceae)

Two populations ofAdiantum Xvariopinnatum were found at the La Selva Biological Field Station in Costa Rica. The plants were morphologically intermediate between their parents, showed additive isozyme banding patterns, and had aborted spores. Herbarium searches for the hybrid turned up specimens from Nicaragua, Costa Rica, Panama, Venezuela, and Colombia. These are the first reports of the hybrid outside of Trinidad.     

Development of primer sets for PCR amplification of the PgiC gene in ferns

Polymerase chain reaction (PCR)-based nuclear DNA markers were developed for fern species. We first determined the partial nucleotide sequence of cDNA of the pgiC gene encoding cytosolic phosphoglucose isomerase from Dryopteris caudipinna, and then PCR primers for exon-primed, intron-crossing (EPIC) amplifications were designed. The EPIC primers are universally applicable to the most derived indusiate fern families such as Dryopteridaceae, Thelypteridaceae, and Woodsiaceae. The PCR products of primers 14F/16R containing two introns are moderate in size (534 bp–ca.1000 bp) and are possibly of value in phylogenetic reconstruction at specific and generic levels. Codominant nuclear DNA markers applicable to the estimation of mating systems and other population genetic studies were also developed by a combination of single-strand conformation polymorphism (SSCP) and EPIC amplification using primers 14F/15R and 15F/16R. In order to provide a case study using these markers, allelic variation of PCR products using 15F/16R was examined in populations of Arachniodes standishii (Dryopteridaceae). Received: July 4, 2001 / Accepted: September 12, 2001