Population persistence under high mutation rate: From evolutionary rescue to lethal mutagenesis

Populations may genetically adapt to severe stress that would otherwise cause their extirpation. Recent theoretical work, combining stochastic demography with Fisher's geometric model of adaptation, has shown how evolutionary rescue becomes unlikely beyond some critical intensity of stress. Increasing mutation rates may however allow adaptation to more intense stress, raising concerns about the effectiveness of treatments against pathogens. This previous work assumes that populations are rescued by the rise of a single resistance mutation. However, even in asexual organisms, rescue can also stem from the accumulation of multiple mutations in a single genome. Here, we extend previous work to study the rescue process in an asexual population where the mutation rate is sufficiently high so that such events may be common. We predict both the ultimate extinction probability of the population and the distribution of extinction times. We compare the accuracy of different approximations covering a large range of mutation rates. Moderate increase in mutation rates favors evolutionary rescue. However, larger increase leads to extinction by the accumulation of a large mutation load, a process called lethal mutagenesis. We discuss how these results could help design “evolution‐proof” antipathogen treatments that even highly mutable strains could not overcome.     

Determining habitat quality for the cooperatively breeding Rufous Treecreeper,Climacteris rufa

Abstract The theory of habitat selection predicts that organisms should use habitat that maximizes their fitness. The cooperatively breeding Rufous Treecreeper, Climacteris rufa, exhibits non‐random habitat use at a number of spatial scales. By assessing correlative relationships between nest‐site use and nest success, and territory use and reproductive success and survival, it was determined whether non‐random use of habitat yields fitness benefits. It was also determined whether breeding group size contributed significantly to fitness once differences in territory quality had been considered. Structural characteristics of nest sites that were positively correlated with the probability of a site being used had no relationship with nest success. This result probably reflects the relatively unrestricted access to an abundance of suitable nest sites in the study area. Habitat traits that predicted territory use by treecreepers were positively correlated with a number of fitness measures. They were also positively correlated with breeding group size and provisioning rate to nestlings, which in turn were correlated with fitness. However, group size was not significantly related to any measure of fitness, except primary male survival, once territory quality had been considered. The quality of territories occupied by Rufous Treecreepers appeared to be a significant factor for breeding group fitness.     

Prediction of location of active sites in biologically active peptides

In a previous paper we demonstrated that the short-range compact regions in atrial natriuretic factor (-hANF) predicted by the average distance map (ADM) correspond to its active sites [Kikuchi,J. Protein Chem.11, 579–581 (1992)]. In the present paper we apply the same method to other bioactive peptides and peptidic enzyme inhibitors. We again observe that active sites in each peptide are contained in short-range compact regions predicted by the ADM for the peptide. This demonstrates that the ADM method predicts the possible location of active sites in biologically active peptides in general. The possibility of practical application of the present method to rational drug design is also discussed.     

LIFE-CYCLE COMPONENTS OF SELECTION IN ERIGERON ANNUUS: II. GENETIC VARIATION

Genetic variation for seedling and adult fitness components was measured under natural conditions to determine the relative importance of the seedling stage for lifetime fitness in Erigeron annuus. Variation in lifetime reproductive success can result from both the persistent effects of genetic variation expressed among seedlings and from variation in adult fitness components. Analysis of covariance was used to separate the stage specific from the cumulative effects of genetic variance expressed earlier in the life cycle. E. annuus produces seeds through apomixis, which allowed measurement of the fitness of replicate genotypes from germination through the entire life cycle. There were significant differences among genotypes for date of emergence, seedling size, survivorship and fecundity, but heritabilities were low, indicating slow response to selection. For all characters, environmental components of variance were one to two orders of magnitude larger than genetic variance components, resulting in broad sense heritabilities less than 0.1. For seedling size and fecundity, all of the genetic variance was in the form of genotype-environment interactions, often with large negative genetic correlations across environments. In contrast, genotypes differed in mean survivorship through one year, but there were no genotype-environment interactions for viability. Genetic differences in viability were primarily expressed as differences in overwinter survivorship. Genotype × environment interactions among sites and blocks were generated early in the life cycle while the genotype × environment interactions in response to competitive environment (open, annual cover, perennial cover) first appeared in adult fecundity. Genetic variation in lifetime fitness was not significant, despite a fourfold difference in mean fitness among genotypes.     

LOCAL ADAPTATION,PHENOTYPIC DIFFERENTIATION,AND HYBRID FITNESS IN DIVERGED NATURAL POPULATIONS OF ARABIDOPSIS LYRATA

Selection for local adaptation results in genetic differentiation in ecologically important traits. In a perennial, outcrossing model plant Arabidopsis lyrata, several differentiated phenotypic traits contribute to local adaptation, as demonstrated by fitness advantage of the local population at each site in reciprocal transplant experiments. Here we compared fitness components, hierarchical total fitness and differentiation in putatively ecologically important traits of plants from two diverged parental populations from different continents in the native climate conditions of the populations in Norway and in North Carolina (NC, U.S.A.). Survival and number of fruits per inflorescence indicated local advantage at both sites and aster life‐history models provided additional evidence for local adaptation also at the level of hierarchical total fitness. Populations were also differentiated in flowering start date and floral display. We also included reciprocal experimental F₁ and F₂ hybrids to examine the genetic basis of adaptation. Surprisingly, the F₂ hybrids showed heterosis at the study site in Norway, likely because of a combination of beneficial dominance effects from different traits. At the NC site, hybrid fitness was mostly intermediate relative to the parental populations. Local cytoplasmic origin was associated with higher fitness, indicating that cytoplasmic genomes also may contribute to the evolution of local adaptation.     

甜菜夜蛾抗氯氟氰菊酯品系相对适合度、抗性生化机理及抗性遗传方式

比较了甜菜夜蛾Spodoptera exigua 抗氯氟氰菊酯品系和敏感品系的繁殖和生长发育特征。结果表明：抗性品系幼虫发育历期延长、蛹重减轻、化蛹率和产卵量降低,抗性品系的适合度为0.61,抗性品系在繁殖和生长发育上存在明显的生存劣势。用两品系3龄幼虫分别测定胡椒基丁醚（PBO）、增效磷SV₁）、脱叶磷（DEF）和顺丁烯二酸二乙酯（DEM）对氯氟氰菊酯的增效作用,抗性品系增效倍数与敏感品系增效倍数之比分别为14.1、14.8、2.3和2.3倍,胡椒基丁醚和增效磷对氯氟氰菊酯增效作用最明显,表明多功能氧化酶参与了甜菜夜蛾对氯氟氰菊酯的抗性。抗性品系3龄幼虫酯酶和谷胱甘肽S-转移酶的活性分别为敏感品系的1.05倍和0.91倍, 抗性品系5龄幼虫多功能氧化酶O-脱甲基活性为敏感品系的1.05倍,两品系间3种酶的活性差异不显著,表明甜菜夜蛾对氯氟氰菊酯的抗性与酯酶、谷胱甘肽S-转移酶及多功能氧化酶O-脱甲基酶活性无关。用剂量对数死亡机率值回归线分析法研究甜菜夜蛾对氯氟氰菊酯的抗性遗传规律,表明甜菜夜蛾对氯氟氰菊酯的抗性为常染色体遗传、多基因控制;正、反交后代的显性度分别为0.61和0.43,抗性遗传为不完全显性。     

Early life of fathers affects offspring fitness in a wild rodent

Intergenerational fitness effects on offspring due to the early life of the parent are well studied from the standpoint of the maternal environment, but intergenerational effects owing to the paternal early life environment are often overlooked. Nonetheless, recent laboratory studies in mammals and ecologically relevant studies in invertebrates predict that paternal effects can have a major impact on the offspring's phenotype. These nongenetic, environment‐dependent paternal effects provide a mechanism for fathers to transmit environmental information to their offspring and could allow rapid adaptation. We used the bank vole Myodes glareolus, a wild rodent species with no paternal care, to test the hypothesis that a high population density environment in the early life of fathers can affect traits associated with offspring fitness. We show that the protein content in the diet and/or social environment experienced during the father's early life (prenatal and weaning) influence the phenotype and survival of his offspring and may indicate adaptation to density‐dependent costs. Furthermore, we show that experiencing multiple environmental factors during the paternal early life can lead to a different outcome on the offspring phenotype than stimulated by experience of a single environmental factor, highlighting the need to study developmental experiences in tandem rather than independent of each other.     

Tolerance to deer herbivory and resistance to insect herbivores in the common evening primrose (Oenothera biennis)

The evolution of plant defence in response to herbivory will depend on the fitness effects of damage, availability of genetic variation and potential ecological and genetic constraints on defence. Here, we examine the potential for evolution of tolerance to deer herbivory in Oenothera biennis while simultaneously considering resistance to natural insect herbivores. We examined (i) the effects of deer damage on fitness, (ii) the presence of genetic variation in tolerance and resistance, (iii) selection on tolerance, (iv) genetic correlations with resistance that could constrain evolution of tolerance and (v) plant traits that might predict defence. In a field experiment, we simulated deer damage occurring early and late in the season, recorded arthropod abundances, flowering phenology and measured growth rate and lifetime reproduction. Our study showed that deer herbivory has a negative effect on fitness, with effects being more pronounced for late‐season damage. Selection acted to increase tolerance to deer damage, yet there was low and nonsignificant genetic variation in this trait. In contrast, there was substantial genetic variation in resistance to insect herbivores. Resistance was genetically uncorrelated with tolerance, whereas positive genetic correlations in resistance to insect herbivores suggest there exists diffuse selection on resistance traits. In addition, growth rate and flowering time did not predict variation in tolerance, but flowering phenology was genetically correlated with resistance. Our results suggest that deer damage has the potential to exert selection because browsing reduces plant fitness, but limited standing genetic variation in tolerance is expected to constrain adaptive evolution in O. biennis.     

深圳南山区天然植物群落的聚类分析

运用组平均聚类法,以44个样方中80个种的重要值为数据,对深圳南山区天然植物群落进行聚类分析。根据聚类结果,南山区天然植物群落可划分为8个群系19个群丛,较全面地反映了群落的组成结构以及群落的生境,为南山区植物群落的保护和管理提供了科学依据。