Plantlet regeneration enhances solasodine productivity in hairy root cultures of <Emphasis Type="Italic">Solanum khasianum</Emphasis> Clarke

Summary Shoot regeneration in hairy root cultures of Solanum khasianum Clarke influences root growth, solasodine production. and permeabilization of solasodine into the medium. These parameters are dependent on exogenously supplied auxin and cytokinin: the effect being both concentration-and clone-dependent. Hairy root cultures with no shoot regeneration showed high permeabilization of solasodine into the medium by the sixth week of incubation, suggesting the medium acts as a sink for the solasodine synthesized by the roots. Solasodine in the culture medium was toxic to the transformed roots and caused browning of root tips. In a separate set of experiments, the hairy root cultures showed regeneration of approximately 50–70 mm long shoots after treatment with indole-3-acetic acid and kinetin. These hairy root cultures had inereased levels of solasodine production, compared to cultures without shoot regeneration. The plantlets formed in the hairy root cultures accumulated some of the solasodine, thereby reducing its permcabilization into the medium. Transport of solasodine from root to shoot reduced the toxic effect of solasodine in the root zone and extended the exponential growth phase by 8-10d.     

Weighted Wilcoxon-type smoothly clipped absolute deviation method

Summary .  Shrinkage-type variable selection procedures have recently seen increasing applications in biomedical research. However, their performance can be adversely influenced by outliers in either the response or the covariate space. This article proposes a weighted Wilcoxon-type smoothly clipped absolute deviation (WW-SCAD) method, which deals with robust variable selection and robust estimation simultaneously. The new procedure can be conveniently implemented with the statistical software R . We establish that the WW-SCAD correctly identifies the set of zero coefficients with probability approaching one and estimates the nonzero coefficients with the rate   n ^−1/2  . Moreover, with appropriately chosen weights the WW-SCAD is robust with respect to outliers in both the x and y directions. The important special case with constant weights yields an oracle-type estimator with high efficiency in the presence of heavier-tailed random errors. The robustness of the WW-SCAD is partly justified by its asymptotic performance under local shrinking contamination. We propose a Bayesian information criterion type tuning parameter selector for the WW-SCAD. The performance of the WW-SCAD is demonstrated via simulations and by an application to a study that investigates the effects of personal characteristics and dietary factors on plasma beta-carotene level.     

植物中 RNA 分子系统运输的研究进展

RNA 分子主要以单链的形式存在于生物体内,既担负着贮存及转移遗传信息的作用,又能作为核酶直接在细胞内发挥代谢功能 . 在植物中 RNA 也可作为活跃的信号分子调控基因表达和发育 . 介绍了包括病毒 RNA 、 RNA 沉默信号、特异内源 RNA 等 RNA 分子,在植物体内的系统运输及其在植物基因表达调控中所起作用的研究进展 .     

环状RNA在肝细胞癌中的作用及机制

肝细胞癌（hepatocellular carcinoma,HCC）治疗困难、预后很差,是肿瘤相关死亡中的第4大癌症,严重危害人类生命健康,但其具体发病机制却仍未完全阐明。因此,探索能调控肝细胞癌发生发展,作为肝细胞癌的诊断标志物或能预测患者预后的关键分子仍十分必要。环状RNA是前体mRNA通过反向剪接产生的由3′, 5′ 磷酸二酯键首尾连接形成的共价闭合环状结构,主要有外显子circRNA（exonic circRNA,ecircRNA）、环状内含子RNA（circular intronic RNA,ciRNA）及外显子 内含子circRNA（exon-intron circRNA,EIciRNA）三大类。由于环状RNA具有普遍性、高度保守性和稳定性,其可以参与多种癌症的发生发展过程,并且可作为肿瘤的早期诊断标志物及预后因子,因此,这是一类新型且非常有潜力应用于临床诊治各阶段的分子。近年来,有大量关于环状RNA与肝细胞癌的研究。这些研究表明,环状RNA在肝细胞癌发生发展进程中发挥的作用十分重要,并且其机制多样。因此,本文主要关注环状RNA在肝细胞癌中的最新进展,总结不同环状RNA分子对于肝细胞癌细胞恶性表型、肿瘤干细胞及肿瘤微环境中免疫细胞的作用,以及其在肝细胞癌临床转移、分期、诊断、预后等各阶段中发挥的功能及其具体作用机制。此外,本文还提出了目前研究中存在的一些问题和不足,以期为未来的研究提供一些新的思路及策略。     

Determination of substrate utilization patterns of soil microbial communities: An approach to assess population changes after hydrocarbon pollution

Abstract: Changes in hydrocarbon content in soils resulted in characteristic shifts of the substrate utilization patterns as tested with the Biolog system. The altered patterns of substrate utilization corresponded to similar changes in abundance of hydrocarbon-utilizing bacteria and the occurrence of specific bacterial groups in the soils. Substrate utilization patterns as recorded with the Biolog system are suitable for rapidly assessing dynamics of autochthonous soil communities and evaluating their biodegradative potential.     

Fenoxycarb,a potent contaminant of the silkworm,Bombyx mori L., does not influence its juvenile hormone titer

Fenoxycarb (FC) effects were studied on juvenile hormone (JH) titers and JH‐esterase activities in the silkworm, B. Mori. In the literature, FC was observed to induce high JH titers but also to act without corpora allata (CA). These contradictory results did not permit us to conclude whether FC was a potent JH mimic or it was acting through the enhancement of JH titers in the hemolymph. Analysis of hemolymph JH‐esterase activities during the last larval instar reveals that FC was not a JH‐esterase inhibitor. Considering JHs, only JH II was detected in the European hybrid 200×300. Furthermore, JH titer was exactly identical in control and FC‐treated larvae, i.e., it dropped during the first 2 days of the last larval instar and became undetectable after day 2. This result is important since it contradicts the generally admitted concept that FC was acting by increasing the titer of JH. On the contrary, it was found that, despite its non‐terpenoid chemical structure, FC might be a JH mimic. In addition, FC suspected contamination of mulberry leaves was analyzed from a physiological viewpoint. We observed that "contaminated" mulberry leaves‐fed larvae became permanent larvae through the inhibition of their prothoracic glands (PG) activity and without any modification of their JH titers, i.e., exactly as for FC‐treated larvae. This last point adds information concerning the suspected implication of FC in the induction of the non‐spinning syndrome. Arch. Insect Biochem. Physiol. 40:141–149, 1999. © 1999 Wiley‐Liss, Inc.     

Bioluminescent assay of total bacterial contamination of drinking water.

A bioluminescent assay of total bacterial contamination (TBC) of drinking water (DW) with a detection limit of approximately 1 CFU/mL and duration of less than 7 h has been developed. The protocol of the TBC assay comprises: incubation of water sample in nutrition broth supplemented with salts mixture, up to 6 h; filtration of bacterial suspension obtained through membrane filter (pore size 0.45 microm); release of bacterial ATP by dimethyl sulphoxide; determination of bacterial ATP concentration using highly sensitive ATP reagent based on recombinant Luciola mingrelica luciferase. To simplify the assay, special luminometer microcuvette Filtravette (New Horizons Diagnostics Corp., USA) are used. A good correlation (R=0.98) between ATP concentration measured after 6 h incubation and initial bacterial titre in DW was observed. Semi-quantitative TBC assay of DW is also available. The TBC value in DW is assessed by the fixation of incubation time required to detect a measurable bioluminescent signal: 3, 4 and 6 h corresponds to 100-1000, 10-100 and 1-10 CFU/mL, respectively.     

施用有机肥环境下盐胁迫小麦幼苗长势和内源激素的变化

在盆栽条件下,研究了不同浓度NaCl处理下,底施不同施用量有机肥小麦品种豫麦49-198幼苗的生长变化,在此基础上,选择出合适的NaCl处理浓度和有机肥施用量区间,并对此情况下小麦幼苗苗和根中内源激素含量和比例的变化进行了测定,以揭示其耐盐差异机制。结果表明,15000-35000 kg/hm²施用量有机肥处理明显减轻NaCl浓度为150 mmol/L的盐胁迫,其中25000 kg/hm²有机肥处理效果最明显;45000 kg/hm²以上的有机肥处理对幼苗生长抑制无明显缓解作用;当NaCl浓度为450 mmol/L时,各种施用量的有机肥处理均不能减轻盐胁迫对幼苗生长的抑制。150 mmol/L NaCl胁迫下,不同施用量有机肥处理,分别为对照(不施肥)、低施用量(15000 kg/hm²)、中施用量(25000 kg/hm²)和高施用量(35000 kg/hm²)的有机肥,土壤盐度的增加量随有机肥用量增加而上升,对小麦幼苗生长的抑制作用得到缓解,以25000 kg/hm²有机肥处理缓解作用最强。有机肥处理下盐胁迫小麦幼苗苗和根中ABA含量的增加得到显著缓解,IAA和GAs的含量比不施有机肥的对照有不同程度的提高, 说明盐胁迫下有机肥处理小麦幼苗具有较高IAA和GAs合成量。盐胁迫下有机肥处理使苗中ZR的含量较高而根中则较低,说明抗盐性较强的有机肥处理可迅速将根部合成的ZR向苗中转移,促进苗的生长。盐胁迫下有机肥处理的IAA/ABA、GAs/ABA、ZR/ABA的比值也有不同程度提高。在盐胁迫下,有机肥处理尤其是在25000 kg/hm²施用量时,小麦幼苗协调自身激素平衡的能力较强可能是其生长受抑制较小的重要原因。