Energy conservation by Rhodothermus marinus respiratory complex I

A sodium ion efflux, together with a proton influx and an inside-positive ΔΨ, was observed during NADH-respiration by Rhodothermus marinus membrane vesicles. Proton translocation was monitored by fluorescence spectroscopy and sodium ion transport by ²³Na-NMR spectroscopy. Specific inhibitors of complex I (rotenone) and of the dioxygen reductase (KCN) inhibited the proton and the sodium ion transport, but the KCN effect was totally reverted by the addition of menaquinone analogues, indicating that both transports were catalyzed by complex I. We concluded that the coupling ion of the system is the proton and that neither the catalytic reaction nor the establishment of the delta-pH are dependent on sodium, but the presence of sodium increases proton transport. Moreover, studies of NADH oxidation at different sodium concentrations and of proton and sodium transport activities allowed us to propose a model for the mechanism of complex I in which the presence of two different energy coupling sites is suggested.     

Apoptosis initiation and angiogenesis inhibition: melanoma targets for nanosecond pulsed electric fields

Many effective anti-cancer strategies target apoptosis and angiogenesis mechanisms. Applications of non-ionizing, nanosecond pulsed electric fields (nsPEFs) induce apoptosis in vitro and eliminate cancer in vivo; however in vivo mechanisms require closer analysis. These studies investigate nsPEF-induced apoptosis and anti-angiogenesis examined by fluorescent microscopy, immunoblots, and morphology. Six hours after treatment with one hundred 300 ns pulses at 40 kV/cm, cells transiently expressed active caspases indicating that caspase-mediated mechanisms. Three hours after treatment transient peaks in Histone 2AX phosphorylation coincided with terminal deoxynucleotidyl transferase dUTP nick end labeling positive cells and pyknotic nuclei, suggesting caspase-independent mechanisms on nuclei/DNA. Large DNA fragments, but not 180 bp fragmentation ladders, were observed, suggesting incomplete apoptosis. Nevertheless, tumor weight and volume decreased and tumors disappeared. One week after treatment, vessel numbers, vascular endothelial growth factor (VEGF), platelet derived endothelial cell growth factor (PD-ECGF), CD31, CD35 and CD105 were decreased, indicating anti-angiogenesis. The nsPEFs activate multiple melanoma therapeutic targets, which is consistent with successes of nsPEF applications for tumor treatment in vivo as a new cancer therapeutic modality.     

Off-Highway Vehicle Trail Impacts on Breeding Songbirds in Northeastern California

Abstract: Rapid growth in off-highway vehicle (OHV) use in North America leads to concerns about potential impacts on wildlife populations. We studied the relationship between distance to active OHV trail and songbird nesting success and abundance in northeastern California, USA, from 2002 to 2004. We found evidence of greater nest desertion and abandonment and reduced predation on shrub nests <100 m from OHV trails than at nests >100 m from OHV trails. Two of 18 species studied were less abundant at sites on trails than at sites 250 m from trails, and no species were more abundant on trails. Management of OHV trail development should consider possible negative impacts on nesting success and abundance of breeding birds.     

Using Video Surveillance to Estimate Wildlife Use of a Highway Underpass

ABSTRACT Roads pose many threats to wildlife including wildlife-vehicle collisions, which are a danger to humans as well as wildlife. Bridges built with provisions for wildlife can function as important corridors for wildlife passage. We used video surveillance to record wildlife passage under a bridge near Durham, North Carolina, USA, to determine whether it functioned as a wildlife underpass. This is particularly important for white-tailed deer (Odocoileus virginianus) because forests associated with the bridge created a corridor between 2 natural areas. We calculated detection probabilities and estimated the number of crossings as observed crossings divided by detection probability. We observed 126 crossings by >10 species of mammals. Detection probability was 42%; therefore, an estimated 299 wildlife crossings occurred. We observed 75 deer: 17 deer approached the underpass and retreated. We estimated sighting 40% of deer crossings and 92% of deer approaches. Thus, an estimated 185 deer crossings and 18 approaches occurred. As an index of road mortality, we conducted weekly surveys of vehicle-killed animals on a 1.8-km section containing the underpass. We discovered only 5 incidences of animals killed by vehicles. The size and design of the bridge promoted wildlife use of the underpass, providing landscape connectivity between habitats on opposite sides of the highway and likely increasing motorist safety. Thus, bridges in the appropriate landscape context and with a design conducive to wildlife use, can function as a corridor to reduce the effects of fragmentation.     

水淹胁迫下10个树种某些生理指标的变化及其耐水淹能力的比较

以游离脯氨酸和丙二醛(MDA)含量及相对电导率为指标,比较了水淹条件下10个树种的耐水淹能力。结果表明,水淹胁迫下,不同树种的相对电导率及丙二醛含量均呈上升趋势,而游离脯氨酸含量的变化则有显著差异。根据生理指标的变化可以看出,黄连木(Pistacia chinensis Bunge)和石楠(Photinia serrulata Lindl.)的耐水淹能力较弱,耐水淹时间仅为5至10 d;蓝果树(Nyssa sinensis Oliv.)、薄壳山核桃〔Carya illinoensis(Wangenh.)Koch〕、榉树(Zelkova schneideriana Hand.-Mazz.)和一球悬铃木(Platanus occidentalis L.)具有一定的耐水淹能力,耐水淹时间约为25 d;乌桕〔Sapium sebiferum(L.) Roxb.〕和白蜡(Fraxinus chinensis Roxb.)的耐水淹能力较强,耐水淹时间超过45 d;墨西哥落羽杉(Taxodium macronatum Ten.)和花叶杞柳(Salixintegra‘Hakuro Nishiki’)的耐水淹能力最强,受水淹的60 d内无受害现象。     

Cellular defibrillation: interaction of micro-scale electric fields with voltage-gated ion channels

We study the effect of micro-scale electric fields on voltage-gated ion channels in mammalian cell membranes. Such micro- and nano-scale electric fields mimic the effects of multiferroic nanoparticles that were recently proposed [1] as a novel way of controlling the function of voltage-sensing biomolecules such as ion channels. This article describes experimental procedures and initial results that reveal the effect of the electric field, in close proximity of cells, on the ion transport through voltage-gated ion channels. We present two configurations of the whole-cell patch-clamping apparatus that were used to detect the effect of external stimulation on ionic currents and discuss preliminary results that indicate modulation of the ionic currents consistent with the applied stimulus.     

Electrostatic analysis of bacterial expansins

Expansins are a family of proteins with plant cell wall remodeling‐activity, which bind cell wall components through hydrophobic and electrostatic interactions. A shallow area on the surface of the protein serves as the polysaccharide binding site (PBS) and it is composed of conserved residues. However, electric charge differences on the opposite face of the PBS produce basic, neutral, or acidic proteins. An analysis of forty‐four bacterial expansins, homologues of BsEXLX1, revealed two main groups defined by: (a) the presence or absence of disulfide bonds; and (b) by the proteins isoelectric point (pI). We determined the location of the residues responsible for the pI on the structure of representative expansins. Our results suggest that the electric charge at the opposite site of the PBS may help in substrate differentiation among expansins from different species; in addition, electrostatic polarization between the front and the back of the molecule could affect expansin activity on cellulose. Proteins 2015; 83:215–223. © 2014 Wiley Periodicals, Inc.