Perfusion cultures of human tumor cells: a scalable production platform for oncolytic adenoviral vectors

This study demonstrates the novel use of the HeLaS3 human tumor cell line for propagating ONYX-411, a recombinant oncolytic adenoviral vector. HeLaS3 cells enabled high levels of vector production without the risk of generating vector recombinants, which is possible with HEK293 cells. The development of a high-cell-density perfusion process using ATF technology yielded production levels as high as 6 x 10(11) vp/mL, which was approximately sevenfold greater than the titers achieved in fed-batch bioreactors. Several experiments were performed at the bench (15 L) and pilot (70 L) scales to demonstrate the robust and scalable nature of this industrially relevant technology.     

CAN EXPERIMENTS ON CALORIC RESTRICTION BE RECONCILED WITH THE DISPOSABLE SOMA THEORY FOR THE EVOLUTION OF SENESCENCE?

Abstract A publication by Shanley and Kirkwood (2000) attempts to explain data on caloric restriction (CR) and life extension in the context of the Disposable Soma (DS) theory for the evolution of senescence. As the authors concede, this juxtaposition appears at first to offend intuition: According to the DS theory, senescence is the result of a tight budget for caloric energy, such that repair and maintenance functions are shortchanged; yet, in CR experiments, it is found that longevity decreases smoothly as the total caloric budget is increased. In the Shanley-Kirkwood model, an optimized allocation of resources causes energy to be diverted away from somatic maintenance at a greater rate than caloric intake increases, with the net result that more total energy is associated with less energy available for maintenance. In the present critique, the limitations of this model are detailed and its special assumptions reviewed. While the CR experiments find comparable life extension for males and females, measured relative to nonbreeding controls, the Shanley-Kirkwood model draws its energy budget from data on breeding females. In addition, the success in reproducing the observed relationship between feeding and longevity depends crucially on a mathematical relationship between food availability and the probability of reproductive success which may be difficult to justify.     

Detection and quantification of microorganisms in anaerobic bioreactors

The presence of sulfate in anaerobic reactors can trigger competitive and syntrophic interactions between various groups of microorganisms, such as sulfate reducers, methanogens and acetogens. In order to steer the reactor process in the direction of sulfidogenesis or methanogenesis, it is essential to get insight into the population dynamics of these groups of microorganisms upon changes in the reactor operating conditions. Several methods exist to characterize and quantify the microbial sludge composition. Combining classical microbiological and modern molecular-based sludge characterization methods has proven to be a powerful approach to study the microbial composition of the anaerobic sludge.     

Nuclear magnetic resonance in environmental engineering: Principles and applications

This paper gives an introduction to nuclear magnetic resonance spectroscopy (NMR) and magnetic resonance imaging (MRI) in relation to applications in the field of environmental science and engineering. The underlying principles of high resolution solution and solid state NMR, relaxation time measurements and imaging are presented. Then, the use of NMR is illustrated and reviewed in studies of biodegradation and biotransformation of soluble and solid organic matter, removal of nutrients and xenobiotics, fate of heavy metal ions, and transport processes in bioreactor systems.     

Disposable bioreactor for cell culture using wave-induced agitation

This work describes a novel bioreactor system for the cultivation of animal, insect, and plant cells using wave agitation induced by a rocking motion. This agitation system provides good nutrient distribution, off-bottom suspension, and excellent oxygen transfer without damaging fluid shear or gas bubbles. Unlike other cell culture systems, such as spinners, hollow-fiber bioreactors, and roller bottles, scale-up is simple, and has been demonstrated up to 100 L of culture volume. The bioreactor is disposable, and therefore requires no cleaning or sterilization. Additions and sampling are possible without the need for a laminar flow cabinet. The unit can be placed in an incubator requiring minimal instrumentation. These features dramatically lower the purchase cost, and operating expenses of this laboratory/pilot scale cell cultivation system. Results are presented for various model systems: 1) recombinant NS0 cells in suspension; 2) adenovirus production using human 293 cells in suspension; 3) Sf9 insect cell/baculovirus system; and 4) human 293 cells on microcarrier. These examples show the general suitability of the system for cells in suspension, anchorage-dependent culture, and virus production in research and GMP applications. This revised version was published online in July 2006 with corrections to the Cover Date.     

Disposable screen-printed enzyme sensor for simultaneous determination of starch and glucose

A disposable screen-printed biosensor with dual working electrodes was first established for simultaneous determination of starch and glucose. The electrochemical behavior of the sensor was assessed using cyclic voltammetry and chronoamperometry. The linear response ranges of the sensor were up to 0.4% (w/v) starch and 20 mmol glucose 1^–1. Real samples were analysed using the proposed method and the reference method and the correlation coefficient was 0.997.     

Methods and milliliter scale devices for high-throughput bioprocess design

Based on electromagnetic simulations as well as on computational fluid dynamics simulations gas-inducing impellers and their magnetic inductive drive were optimized for stirred-tank reactors on a 10 ml-scale arranged in a bioreaction block with 48 bioreactors. High impeller speeds of up to 4,000 rpm were achieved at very small electrical power inputs (63 W with 48 bioreactors). The maxima of local energy dissipation in the reaction medium were estimated to be up to 50 W L⁻¹ at 2,800 rpm. Total power input and local energy dissipation are thus well comparable to standard stirred-tank bioreactors. A prototype fluorescence reader for 8 bioreactors with immobilized fluorometric sensor spots was applied for online measurement of dissolved oxygen concentration making use of the phase detection method. A self-optimizing scheduling software was developed for parallel control of 48 bioreactors with a liquid-handling system for automation of titration and sampling. It was shown on the examples of simple parallel batch cultivations of Escherichia coli with different media compositions that high cell densities of up to 16.5 g L⁻¹ dry cell mass can be achieved without pH-control within 5 h with a high parallel reproducibility (standard deviation<3.5%, n=48) due to the high oxygen transfer capability of the gas-inducing stirred-tank bioreactors.     

Beta-glucan production by Botryosphaeria rhodina in different bench-top bioreactors

AIMS: Evaluation of the technical feasibility of transferring beta-glucan production by Botryosphaeria rhodina DABAC-P82 from shaken flasks to bench-top bioreactors. METHODS AND RESULTS: Three different bioreactors were used: 3 l stirred tank reactor (STR-1) equipped with two different six-blade turbines; STR as above but equipped with a three-blade marine propeller plus draft-tube (STR-2); 2 l air-lift column reactor (ALR) equipped with an external loop. STR-1, tested at three different stirrer speeds (300, 500 and 700 rev min(-1)) appeared to be less suitable for beta-glucan production by the fungus, being maximum production (19.4 g l(-1)), productivity (0.42 g l(-1) h(-1)) and yield (0.48 g g(-1) of glucose consumed) markedly lower than those obtained in shaken culture (29.7 g l(-1), 1.23 g l(-1) h(-1) and 0.61 g g(-1), respectively). Better performances were obtained with both STR-2 and ALR. With the latter, in particular, the increase of production was accompanied by reduced fermentation time (25.7 g l(-1) after only 22 h); productivity and yield were highest (1.17 g l(-1) h(-1) and 0.62 g g(-1) of glucose consumed, respectively). CONCLUSION: Using an air-lift reactor with external loop, the scaling up from shaken flasks to bench-top bioreactor of the beta-glucan production by B. rhodina DABAC-P82 is technically feasible. SIGNIFICANCE AND IMPACT OF THE STUDY: Although culture conditions are still to be optimized, the results obtained using the ARL are highly promising.     

Use of 1H NMR to study transport processes in porous biosystems

The operation of bioreactors and the metabolism of microorganisms in biofilms or soil/sediment systems are strongly dictated by the transport processes therein. Nuclear magnetic resonance (NMR) spectroscopy or magnetic resonance imaging (MRI) allow nondestructive and noninvasive quantification and visualisation (in case of MRI) of both static and dynamic water transport phenomena. Flow, mass transfer and transport processes can be measured by mapping the (proton) displacement in a defined time interval directly in a so-called pulsed field gradient (PFG) experiment. Other methods follow the local intensity in time-controlled sequential images of water or labelled molecules, or map the effect of contrast agents. Combining transport measurements with relaxation-time information allows the discrimination of transport processes in different environments or of different fluids, even within a single picture element in an image of the porous biosystem under study. By proper choice of the applied NMR method, a time window ranging from milliseconds to weeks (or longer) can be covered. In this paper, we present an overview of the principles of NMR and MRI techniques to visualise and unravel complex, heterogeneous transport processes in porous biological systems. Applications and limitations will be discussed, based on results obtained in (model) biofilms, bioreactors, microbial mats and sediments. Journal of Industrial Microbiology & Biotechnology (2001) 26, 43–52. Received 20 April 2000/ Accepted in revised form 14 August 2000