AcMNPV肌动蛋白核定位基因的亚细胞定位

当前细胞核内肌动蛋白的功能是一个研究热点,核内存在肌动蛋白并参与细胞核内发生的许多生命活动。杆状病毒是迄今唯一报道的利用核内肌动蛋白进行复制增殖的病原微生物,为核内肌动蛋白的结构与功能的研究提供了独特的系统。有报道显示AcMNPV的ie-1,pe38,ac4,he65,ac102和ac152基因与肌动蛋白单体的核转运有关,然而关于这六个基因的亚细胞定位及其在肌动蛋白入核过程中的功能并没有深入的研究。本文首次揭示了这六个基因的亚细胞定位,IE1和AC152是全细胞分布,PE38和AC102也为核质分布,但主要分布在细胞核中,而AC4和HE65定位于细胞质。但AC102和IE1可以分别介导AC4和HE65入核。同时我们发现当使用外源强启动子OpIE2,在转染ie-1或pe38之后表达ac4和he65可以部分招募肌动蛋白单体入核,而时序性共转染这四个基因则可招募最多肌动蛋白单体入核。对肌动蛋白核定位基因在细胞中的定位分析为进一步了解杆状病毒介导肌动蛋白入核的分子机理提供支持。     

Identification of positive selection in disease response genes within members of the Poaceae

Millions of years of coevolution between plants and pathogens can leave footprints on their genomes and genes involved on this interaction are expected to show patterns of positive selection in which novel, beneficial alleles are rapidly fixed within the population. Using information about upregulated genes in maize during Colletotrichum graminicola infection and resources available in the Phytozome database, we looked for evidence of positive selection in the Poaceae lineage, acting on protein coding sequences related with plant defense. We found six genes with evidence of positive selection and another eight with sites showing episodic selection. Some of them have already been described as evolving under positive selection, but others are reported here for the first time including genes encoding isocitrate lyase, dehydrogenases, a multidrug transporter, a protein containing a putative leucine-rich repeat and other proteins with unknown functions. Mapping positively selected residues onto the predicted 3-D structure of proteins showed that most of them are located on the surface, where proteins are in contact with other molecules. We present here a set of Poaceae genes that are likely to be involved in plant defense mechanisms and have evidence of positive selection. These genes are excellent candidates for future functional validation.     

Mining and gene ontology based annotation of SSR markers from expressed sequence tags of Humulus lupulus

Humulus lupulus is commonly known as hops, a member of the family moraceae. Currently many projects are underway leading to the accumulation of voluminous genomic and expressed sequence tag sequences in public databases. The genetically characterized domains in these databases are limited due to non-availability of reliable molecular markers. The large data of EST sequences are available in hops. The simple sequence repeat markers extracted from EST data are used as molecular markers for genetic characterization, in the present study. 25,495 EST sequences were examined and assembled to get full-length sequences. Maximum frequency distribution was shown by mononucleotide SSR motifs i.e. 60.44% in contig and 62.16% in singleton where as minimum frequency are observed for hexanucleotide SSR in contig (0.09%) and pentanucleotide SSR in singletons (0.12%). Maximum trinucleotide motifs code for Glutamic acid (GAA) while AT/TA were the most frequent repeat of dinucleotide SSRs. Flanking primer pairs were designed in-silico for the SSR containing sequences. Functional categorization of SSRs containing sequences was done through gene ontology terms like biological process, cellular component and molecular function.     

细菌必需基因、最小基因组和合成细胞

单细胞原核生物是原始的细胞生命形式,确定细菌必需基因和最小基因组对理解生命的本质、细胞生命的起源和进化有非常重要的意义。文中简要介绍近年来有关细菌的必需基因、最小基因组和合成细胞的研究方法、理论和进展。还特别介绍人工建立最小细菌基因组的策略以及应用前景。     

抗虫基因研究及在芸薹属作物上的应用

芸薹属作物属十字花科,包括多种重要的蔬菜和油料作物。该类作物易受病虫害侵袭,造成品质和产量严重受损。化学方法防治害虫不仅破坏环境而且费用昂贵,所以培育抗虫品种成为既经济又环保的措施之一。但由于目前抗虫资源匮乏,难以通过常规育种培育出抗虫的品种,植物基因工程技术的应用,能加快育种进程,提高育种效率。简要介绍近年来抗虫基因的发掘及其在芸薹属中的应用进展。     

转cry1Ac＋cry2Ab基因棉与转cry1Ac＋剧咯邢基因棉荒地的生存竞争能力

【背景】此研究为“十二五”转基因生物新品种培育国家项目中创建新的转基因棉花品种环境安全评价技术而设。【方法】以转双价双成抗虫基因（cry1Ac＋cry2Ab）棉和转双价抗虫、抗除草剂基因（cry1Ac＋肼强阳）棉为观察品种,非转基因棉赣棉11号为对照品种,在荒地用撒播和3cm深度播种2种方式,于2011年5月一2012年3月对棉花出苗率、株高、生育进程、棉吐絮瓣数、絮瓣脱落率、自生苗等生存竞争能力进行比较,检测、评价其杂草化的风险,并探讨、验证检测技术的可行性。【结果】在荒地条件下,以2种方式播种的转cry1Ac＋cry2Ab基因棉和转cry1Ac＋EP5P5基因棉与非转基因棉相比,上述各项指标的竞争能力总体上未表现显著优势。【结论与意义】转cry1Ac＋cry2Ab基因棉和转cry1Ac＋EPSPS基因棉在荒地条件下生长无杂草化风险。同时,研究证明,在荒地自然生态条件下,可以采用撒播和3cm深度播种方法检测新的转基因棉花品种在生存竞争能力上的杂草化风险,在测评上有互为参照效应,为定性评价新的转基因棉花品种的杂草化风险提供了保障。     

玉米与其他六种植物NBS类抗病基因的进化比较分析

具有核苷酸结合位点(nucleotide binding site,NBS)的抗病基因在植物抵抗各种病原菌侵染中起关键作用。对玉米全基因组中具有NBS结构的基因进行鉴定和分析,并结合水稻、高粱、拟南芥、百脉根、苜蓿和杨树的NBS类基因比较其在数量、复制、染色体定位和亲缘关系上的进化差异。发现玉米NBS类基因数量、复制数和成簇基因数均明显少于其他植物。低复制频率可能导致玉米NBS类基因较少,并推测可能导致其功能具有多样性。在基因染色体定位上,除高梁外,玉米与其他五种植物相似,呈不均衡分布。此外,进化树分析表明玉米NBS类基因与高粱的亲缘关系最近,与拟南芥的最远,在物种间表现出较高的保守性。结果对掲示玉米NBS基因的进化特点与发掘有益的NBS类抗病基因提供了重要的理论依据。     

稳定表达人Fhit突变体细胞系的建立

目的:构建人脆性组氨酸三联体(Fhit)突变体真核表达载体并建立稳定表达人Fhit突变体的细胞株,以便进一步研究Fhit与复制蛋白A(RPA)在体内的相互作用。方法:将3种人Fhit突变体cDNA克隆至带有HA标签的真核表达载体pREP10上,构建人Fhit突变体真核表达载体,转染HeLa细胞,经潮霉素B加压筛选阳性克隆,用Western印迹鉴定稳定表达Fhit突变体蛋白FhitA、FhitD和FhitF的阳性细胞株。结果:经PCR鉴定及序列分析,Fhit突变体基因真核表达载体pREP10/FhitA/D/F-HA构建正确,转染人HeLa细胞,筛选出Fhit突变体表达较高的细胞株。结论:建立了3株稳定表达Fhit突变体的细胞株HeLa-FhitA/D/F,为研究Fhit与RPA的相互作用在DNA损伤应答中发挥的作用奠定了基础。